RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 NFIXQ14938 502 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 SOGA3Q5TF21 947 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 USPL1Q5W0Q7 1092 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 PANK3Q9H999 370 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 FAM198AQ9UFP1 575 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 KNSTRNQ9Y448 316 aa7.68□□□□□ -1.18
VPS8-214ENST00000458721 H0YIN7 160 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 STARD3NLO95772 234 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 PDE6BP35913 854 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 MLLT3P42568 568 aaPredicted RBP7.67□□□□□ -1.18
VPS8-214ENST00000458721 PRELPP51888 382 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 DNAJC10Q8IXB1 793 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 TNS4Q8IZW8 715 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 TEX13AQ9BXU3 409 aaPredicted RBP7.67□□□□□ -1.18
VPS8-214ENST00000458721 RRAGCQ9HB90 399 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 ZBTB1Q9Y2K1 713 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 NPC1L1Q9UHC9 1359 aa7.67□□□□□ -1.18
VPS8-214ENST00000458721 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 NFKBIEO00221 500 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 RNMTO43148 476 aaKnown RBP7.66□□□□□ -1.18
VPS8-214ENST00000458721 SERPINB2P05120 415 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 RASSF7Q02833 373 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 COL13A1Q5TAT6 717 aaPredicted RBP7.66□□□□□ -1.18
VPS8-214ENST00000458721 TTC5Q8N0Z6 440 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 TATDN2Q93075 761 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 BRIP1Q9BX63 1249 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 WBP1LQ9NX94 342 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
VPS8-214ENST00000458721 PNMA3Q9UL41 463 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 HEG1Q9ULI3 1381 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 COL3A1P02461 1466 aaPredicted RBP7.66□□□□□ -1.18
VPS8-214ENST00000458721 THSD7BQ9C0I4 1608 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 ADAMTSL1Q8N6G6 1762 aa7.66□□□□□ -1.18
VPS8-214ENST00000458721 IQCA1LA6NCM1 817 aa7.65□□□□□ -1.18
VPS8-214ENST00000458721 SMAPO00193 183 aa7.65□□□□□ -1.18
VPS8-214ENST00000458721 EIF5P55010 431 aaKnown RBP7.65□□□□□ -1.18
VPS8-214ENST00000458721 C2CD5Q86YS7 1000 aa7.65□□□□□ -1.18
VPS8-214ENST00000458721 CEMIPQ8WUJ3 1361 aa7.65□□□□□ -1.18
VPS8-214ENST00000458721 POLR3GLQ9BT43 218 aa7.65□□□□□ -1.18
VPS8-214ENST00000458721 NPDC1Q9NQX5 325 aaPredicted RBP7.65□□□□□ -1.18
VPS8-214ENST00000458721 HSPA1AP0DMV8 641 aaKnown RBP7.64□□□□□ -1.19
VPS8-214ENST00000458721 HSPA1BP0DMV9 641 aaKnown RBP7.64□□□□□ -1.19
VPS8-214ENST00000458721 HSPA5P11021 654 aaKnown RBP7.64□□□□□ -1.19
VPS8-214ENST00000458721 IL6STP40189 918 aaPredicted RBP7.64□□□□□ -1.19
VPS8-214ENST00000458721 NUDT18Q6ZVK8 323 aa7.64□□□□□ -1.19
VPS8-214ENST00000458721 NPM2Q86SE8 214 aaKnown RBP7.64□□□□□ -1.19
VPS8-214ENST00000458721 GAS2L2Q8NHY3 880 aa7.64□□□□□ -1.19
VPS8-214ENST00000458721 CNKSR1Q969H4 720 aa7.64□□□□□ -1.19
VPS8-214ENST00000458721 TAOK3Q9H2K8 898 aa7.64□□□□□ -1.19
VPS8-214ENST00000458721 HPS5Q9UPZ3 1129 aa7.64□□□□□ -1.19
VPS8-214ENST00000458721 SLX4Q8IY92 1834 aa7.64□□□□□ -1.19
VPS8-214ENST00000458721 DIAPH1O60610 1272 aaKnown RBP7.63□□□□□ -1.19
VPS8-214ENST00000458721 ST5P78524 1137 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 HTRA3P83110 453 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 TEFQ10587 303 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 ERFEQ4G0M1 354 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 STYK1Q6J9G0 422 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 PRR5LQ6MZQ0 368 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 ZNF790Q6PG37 636 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 PADI6Q6TGC4 694 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 CNBD1Q8NA66 436 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 TTC13Q8NBP0 860 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 LGR6Q9HBX8 967 aa7.63□□□□□ -1.19
VPS8-214ENST00000458721 RIC1Q4ADV7 1423 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 CNTNAP1P78357 1384 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 C3orf80F5H4A9 247 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 ITGBL1O95965 494 aaPredicted RBP7.62□□□□□ -1.19
VPS8-214ENST00000458721 SLC39A6Q13433 755 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 MTHFSDQ2M296 383 aaKnown RBP7.62□□□□□ -1.19
VPS8-214ENST00000458721 CLEC4GQ6UXB4 293 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 SAMD7Q7Z3H4 446 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 LDHDQ86WU2 507 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 FMNL2Q96PY5 1086 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 ZNF652Q9Y2D9 606 aa7.62□□□□□ -1.19
VPS8-214ENST00000458721 PASKQ96RG2 1323 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 GNAT3A8MTJ3 354 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 POTECB2RU33 542 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 SEMA3EO15041 775 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 SRGNP10124 158 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 CANXP27824 592 aaKnown RBP7.61□□□□□ -1.19
VPS8-214ENST00000458721 PPP4CP60510 307 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 TBC1D9BQ66K14 1250 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 PRPF40BQ6NWY9 871 aaKnown RBP7.61□□□□□ -1.19
VPS8-214ENST00000458721 MASTLQ96GX5 879 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 ZNF496Q96IT1 587 aaPredicted RBP7.61□□□□□ -1.19
VPS8-214ENST00000458721 SETDB2Q96T68 719 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 PRDM10Q9NQV6 1147 aa7.61□□□□□ -1.19
VPS8-214ENST00000458721 IBTKQ9P2D0 1353 aaPredicted RBP7.6□□□□□ -1.19
VPS8-214ENST00000458721 KLRG2A4D1S0 409 aaPredicted RBP7.6□□□□□ -1.19
VPS8-214ENST00000458721 NPHP1O15259 732 aa7.6□□□□□ -1.19
VPS8-214ENST00000458721 C21orf2O43822 256 aa7.6□□□□□ -1.19
VPS8-214ENST00000458721 CAMTA2O94983 1202 aa7.6□□□□□ -1.19
VPS8-214ENST00000458721 HMOX1P09601 288 aa7.6□□□□□ -1.19
VPS8-214ENST00000458721 PTGDRQ13258 359 aa7.6□□□□□ -1.19
VPS8-214ENST00000458721 CCDC93Q567U6 631 aa7.6□□□□□ -1.19
VPS8-214ENST00000458721 ZNF622Q969S3 477 aaKnown RBP eCLIP7.6□□□□□ -1.19
VPS8-214ENST00000458721 KDM3BQ7LBC6 1761 aa7.59□□□□□ -1.19
VPS8-214ENST00000458721 KIF7Q2M1P5 1343 aa7.59□□□□□ -1.19
VPS8-214ENST00000458721 PER1O15534 1290 aaPredicted RBP7.59□□□□□ -1.19
VPS8-214ENST00000458721 RGS20O76081 388 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms