RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 CWF19L2Q2TBE0 894 aaKnown RBP17.02■□□□□ 0.32
COMMD1-206ENST00000458337 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
COMMD1-206ENST00000458337 LINS1Q8NG48 757 aa17.02■□□□□ 0.32
COMMD1-206ENST00000458337 GCKRQ14397 625 aa17.01■□□□□ 0.31
COMMD1-206ENST00000458337 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
COMMD1-206ENST00000458337 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
COMMD1-206ENST00000458337 ZNF277Q9NRM2 450 aaPredicted RBP17.01■□□□□ 0.31
COMMD1-206ENST00000458337 TAF1P21675 1872 aa17.01■□□□□ 0.31
COMMD1-206ENST00000458337 BEND3Q5T5X7 828 aa17■□□□□ 0.31
COMMD1-206ENST00000458337 DPY19L2Q6NUT2 758 aa17■□□□□ 0.31
COMMD1-206ENST00000458337 SLC51AQ86UW1 340 aa17■□□□□ 0.31
COMMD1-206ENST00000458337 MRPL50Q8N5N7 158 aaKnown RBP17■□□□□ 0.31
COMMD1-206ENST00000458337 RTFDC1Q9BY42 306 aaPredicted RBP17■□□□□ 0.31
COMMD1-206ENST00000458337 VPS33BQ9H267 617 aa17■□□□□ 0.31
COMMD1-206ENST00000458337 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
COMMD1-206ENST00000458337 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
COMMD1-206ENST00000458337 CASP7P55210 303 aa16.99■□□□□ 0.31
COMMD1-206ENST00000458337 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
COMMD1-206ENST00000458337 CELF1Q92879 486 aaKnown RBP16.99■□□□□ 0.31
COMMD1-206ENST00000458337 TMX4Q9H1E5 349 aaPredicted RBP16.99■□□□□ 0.31
COMMD1-206ENST00000458337 F6X3S4 739 aa16.98■□□□□ 0.31
COMMD1-206ENST00000458337 FZD9O00144 591 aa16.98■□□□□ 0.31
COMMD1-206ENST00000458337 ALDH1L2Q3SY69 923 aa16.98■□□□□ 0.31
COMMD1-206ENST00000458337 CCDC152Q4G0S7 254 aa16.98■□□□□ 0.31
COMMD1-206ENST00000458337 TTLL11Q8NHH1 800 aa16.98■□□□□ 0.31
COMMD1-206ENST00000458337 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
COMMD1-206ENST00000458337 PLA2G12BQ9BX93 195 aa16.98■□□□□ 0.31
COMMD1-206ENST00000458337 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
COMMD1-206ENST00000458337 POTECB2RU33 542 aa16.97■□□□□ 0.31
COMMD1-206ENST00000458337 MPNDQ8N594 471 aa16.97■□□□□ 0.31
COMMD1-206ENST00000458337 TIAM2Q8IVF5 1701 aa16.96■□□□□ 0.31
COMMD1-206ENST00000458337 TOMM70O94826 608 aa16.96■□□□□ 0.31
COMMD1-206ENST00000458337 UBE3BQ7Z3V4 1068 aa16.96■□□□□ 0.31
COMMD1-206ENST00000458337 SUPT20HQ8NEM7 779 aa16.96■□□□□ 0.31
COMMD1-206ENST00000458337 SEC31BQ9NQW1 1179 aa16.96■□□□□ 0.31
COMMD1-206ENST00000458337 ALDH1L1O75891 902 aa16.95■□□□□ 0.3
COMMD1-206ENST00000458337 CSF1RP07333 972 aa16.95■□□□□ 0.3
COMMD1-206ENST00000458337 VEGFAP15692 232 aaPredicted RBP16.95■□□□□ 0.3
COMMD1-206ENST00000458337 CTSWP56202 376 aa16.95■□□□□ 0.3
COMMD1-206ENST00000458337 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
COMMD1-206ENST00000458337 RTL9Q8NET4 1388 aa16.94■□□□□ 0.3
COMMD1-206ENST00000458337 DDNO94850 711 aaPredicted RBP16.94■□□□□ 0.3
COMMD1-206ENST00000458337 BRPF1P55201 1214 aaPredicted RBP16.94■□□□□ 0.3
COMMD1-206ENST00000458337 JDP2Q8WYK2 163 aa16.94■□□□□ 0.3
COMMD1-206ENST00000458337 COL4A1P02462 1669 aa16.94■□□□□ 0.3
COMMD1-206ENST00000458337 PTPRCP08575 1304 aa16.94■□□□□ 0.3
COMMD1-206ENST00000458337 WDR90Q96KV7 1748 aa16.93■□□□□ 0.3
COMMD1-206ENST00000458337 LARGE2Q8N3Y3 721 aa16.93■□□□□ 0.3
COMMD1-206ENST00000458337 L3MBTL3Q96JM7 780 aaPredicted RBP16.93■□□□□ 0.3
COMMD1-206ENST00000458337 PODXL2Q9NZ53 605 aa16.93■□□□□ 0.3
COMMD1-206ENST00000458337 MYH3P11055 1940 aa16.93■□□□□ 0.3
COMMD1-206ENST00000458337 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
COMMD1-206ENST00000458337 COL4A5P29400 1685 aa16.92■□□□□ 0.3
COMMD1-206ENST00000458337 KIAA2012Q0VF49 1180 aa16.92■□□□□ 0.3
COMMD1-206ENST00000458337 RBM46Q8TBY0 533 aaKnown RBP16.92■□□□□ 0.3
COMMD1-206ENST00000458337 SRCIN1Q9C0H9 1055 aa16.92■□□□□ 0.3
COMMD1-206ENST00000458337 GREM2Q9H772 168 aa16.92■□□□□ 0.3
COMMD1-206ENST00000458337 GRM8O00222 908 aa16.91■□□□□ 0.3
COMMD1-206ENST00000458337 PPIP5K2O43314 1243 aa16.91■□□□□ 0.3
COMMD1-206ENST00000458337 GPSM2P81274 684 aa16.91■□□□□ 0.3
COMMD1-206ENST00000458337 FOXO4P98177 505 aa16.91■□□□□ 0.3
COMMD1-206ENST00000458337 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
COMMD1-206ENST00000458337 CCDC85AQ96PX6 553 aaPredicted RBP16.91■□□□□ 0.3
COMMD1-206ENST00000458337 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
COMMD1-206ENST00000458337 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
COMMD1-206ENST00000458337 ZNF541Q9H0D2 1346 aa16.91■□□□□ 0.3
COMMD1-206ENST00000458337 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
COMMD1-206ENST00000458337 HNRNPUQ00839 825 aaKnown RBP eCLIP16.9■□□□□ 0.3
COMMD1-206ENST00000458337 AOC3Q16853 763 aa16.9■□□□□ 0.3
COMMD1-206ENST00000458337 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
COMMD1-206ENST00000458337 GPC2Q8N158 579 aa16.9■□□□□ 0.3
COMMD1-206ENST00000458337 CDC5LQ99459 802 aaKnown RBP16.9■□□□□ 0.3
COMMD1-206ENST00000458337 BSDC1Q9NW68 430 aaPredicted RBP16.9■□□□□ 0.3
COMMD1-206ENST00000458337 ZNRF3Q9ULT6 936 aa16.9■□□□□ 0.3
COMMD1-206ENST00000458337 UTYO14607 1347 aa16.9■□□□□ 0.3
COMMD1-206ENST00000458337 EIF6P56537 245 aaKnown RBP16.89■□□□□ 0.29
COMMD1-206ENST00000458337 NIM1KQ8IY84 436 aa16.89■□□□□ 0.29
COMMD1-206ENST00000458337 C16orf71Q8IYS4 520 aaPredicted RBP16.89■□□□□ 0.29
COMMD1-206ENST00000458337 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
COMMD1-206ENST00000458337 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
COMMD1-206ENST00000458337 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.29
COMMD1-206ENST00000458337 DUOX1Q9NRD9 1551 aa16.89■□□□□ 0.29
COMMD1-206ENST00000458337 LTBP1Q14766 1721 aa16.88■□□□□ 0.29
COMMD1-206ENST00000458337 FSTL1Q12841 308 aa16.88■□□□□ 0.29
COMMD1-206ENST00000458337 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
COMMD1-206ENST00000458337 C9orf78Q9NZ63 289 aaPredicted RBP16.88■□□□□ 0.29
COMMD1-206ENST00000458337 IQCA1LA6NCM1 817 aa16.87■□□□□ 0.29
COMMD1-206ENST00000458337 ITGA6P23229 1130 aa16.87■□□□□ 0.29
COMMD1-206ENST00000458337 EPHA10Q5JZY3 1008 aa16.87■□□□□ 0.29
COMMD1-206ENST00000458337 NOB1Q9ULX3 412 aaKnown RBP16.87■□□□□ 0.29
COMMD1-206ENST00000458337 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
COMMD1-206ENST00000458337 SCN4AP35499 1836 aa16.86■□□□□ 0.29
COMMD1-206ENST00000458337 C6orf229H3BNL8 230 aa16.86■□□□□ 0.29
COMMD1-206ENST00000458337 NBPF7P0C2Y1 421 aaPredicted RBP16.86■□□□□ 0.29
COMMD1-206ENST00000458337 CXCL9Q07325 125 aa16.86■□□□□ 0.29
COMMD1-206ENST00000458337 ARHGAP45Q92619 1136 aa16.86■□□□□ 0.29
COMMD1-206ENST00000458337 KAZALD1Q96I82 304 aa16.86■□□□□ 0.29
COMMD1-206ENST00000458337 EYA3Q99504 573 aa16.86■□□□□ 0.29
COMMD1-206ENST00000458337 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
COMMD1-206ENST00000458337 HSPA6P17066 643 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms