RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 NPHP1O15259 732 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 TOMM70O94826 608 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 DDR1Q08345 913 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 SUSD4Q5VX71 490 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 C9orf131Q5VYM1 1079 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 C16orf71Q8IYS4 520 aaPredicted RBP12.85□□□□□ -0.35
PCCA-208ENST00000458283 SYNE4Q8N205 404 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 FAM89AQ96GI7 184 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 NMRK2Q9NPI5 230 aa12.85□□□□□ -0.35
PCCA-208ENST00000458283 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
PCCA-208ENST00000458283 ABCC12Q96J65 1359 aa12.84□□□□□ -0.35
PCCA-208ENST00000458283 NFIXQ14938 502 aa12.84□□□□□ -0.35
PCCA-208ENST00000458283 PARP10Q53GL7 1025 aa12.84□□□□□ -0.35
PCCA-208ENST00000458283 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
PCCA-208ENST00000458283 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
PCCA-208ENST00000458283 BICC1Q9H694 974 aaKnown RBP12.84□□□□□ -0.35
PCCA-208ENST00000458283 CHMP3Q9Y3E7 222 aa12.84□□□□□ -0.35
PCCA-208ENST00000458283 LAMB2P55268 1798 aa12.84□□□□□ -0.35
PCCA-208ENST00000458283 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 NTSR2O95665 410 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 PCCAP05165 728 aaPredicted RBP12.83□□□□□ -0.36
PCCA-208ENST00000458283 KCNA3P22001 575 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 CHRNA5P30532 468 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 EPHA10Q5JZY3 1008 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 NBPF5PQ86XG9 351 aaPredicted RBP12.83□□□□□ -0.36
PCCA-208ENST00000458283 CCDC85AQ96PX6 553 aaPredicted RBP12.83□□□□□ -0.36
PCCA-208ENST00000458283 SETDB2Q96T68 719 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 RNF181Q9P0P0 153 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 UTYO14607 1347 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 KDM2BQ8NHM5 1336 aa12.83□□□□□ -0.36
PCCA-208ENST00000458283 DDX60Q8IY21 1712 aaKnown RBP12.82□□□□□ -0.36
PCCA-208ENST00000458283 H7C1W4 665 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
PCCA-208ENST00000458283 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
PCCA-208ENST00000458283 GTF2E1P29083 439 aaPredicted RBP12.82□□□□□ -0.36
PCCA-208ENST00000458283 CASP7P55210 303 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
PCCA-208ENST00000458283 AAMPQ13685 434 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
PCCA-208ENST00000458283 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 TIAM2Q8IVF5 1701 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
PCCA-208ENST00000458283 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
PCCA-208ENST00000458283 IRS4O14654 1257 aaPredicted RBP12.81□□□□□ -0.36
PCCA-208ENST00000458283 ERFEQ4G0M1 354 aa12.81□□□□□ -0.36
PCCA-208ENST00000458283 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
PCCA-208ENST00000458283 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
PCCA-208ENST00000458283 APBB1O00213 710 aa12.8□□□□□ -0.36
PCCA-208ENST00000458283 SRGAP3O43295 1099 aa12.8□□□□□ -0.36
PCCA-208ENST00000458283 IGHDP01880 384 aa12.8□□□□□ -0.36
PCCA-208ENST00000458283 SIRT2Q8IXJ6 389 aa12.8□□□□□ -0.36
PCCA-208ENST00000458283 CNBD1Q8NA66 436 aa12.8□□□□□ -0.36
PCCA-208ENST00000458283 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
PCCA-208ENST00000458283 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
PCCA-208ENST00000458283 RGL2O15211 777 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 HMMRO75330 724 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 TM4SF1P30408 202 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 CTSWP56202 376 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 FAM161AQ3B820 660 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 NYXQ9GZU5 481 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 RWDD1Q9H446 243 aaPredicted RBP12.79□□□□□ -0.36
PCCA-208ENST00000458283 HDAC5Q9UQL6 1122 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 MYH3P11055 1940 aa12.79□□□□□ -0.36
PCCA-208ENST00000458283 PCNTO95613 3336 aa12.78□□□□□ -0.36
PCCA-208ENST00000458283 SERPINB2P05120 415 aa12.78□□□□□ -0.36
PCCA-208ENST00000458283 FOXO4P98177 505 aa12.78□□□□□ -0.36
PCCA-208ENST00000458283 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
PCCA-208ENST00000458283 C3orf67Q6ZVT6 689 aa12.78□□□□□ -0.36
PCCA-208ENST00000458283 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
PCCA-208ENST00000458283 PA2G4Q9UQ80 394 aaKnown RBP12.78□□□□□ -0.36
PCCA-208ENST00000458283 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
PCCA-208ENST00000458283 SPEF2Q9C093 1822 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 ST5P78524 1137 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 ATP8B2P98198 1209 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 RASSF7Q02833 373 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 FSTL1Q12841 308 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 OS9Q13438 667 aaPredicted RBP12.77□□□□□ -0.37
PCCA-208ENST00000458283 HDAC1Q13547 482 aaPredicted RBP12.77□□□□□ -0.37
PCCA-208ENST00000458283 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.37
PCCA-208ENST00000458283 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 SIL1Q9H173 461 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 EXOC6BQ9Y2D4 811 aa12.77□□□□□ -0.37
PCCA-208ENST00000458283 ANKRD31Q8N7Z5 1873 aa12.76□□□□□ -0.37
PCCA-208ENST00000458283 PDE8AO60658 829 aa12.76□□□□□ -0.37
PCCA-208ENST00000458283 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
PCCA-208ENST00000458283 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
PCCA-208ENST00000458283 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
PCCA-208ENST00000458283 RRAGCQ9HB90 399 aa12.76□□□□□ -0.37
PCCA-208ENST00000458283 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
PCCA-208ENST00000458283 COL11A2P13942 1736 aaPredicted RBP12.76□□□□□ -0.37
PCCA-208ENST00000458283 COL4A1P02462 1669 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms