RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 NEK1Q96PY6 1258 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 LLPHQ9BRT6 129 aaKnown RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 FUCA2Q9BTY2 467 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZMYND15Q9H091 742 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 CCDC8Q9H0W5 538 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 SIL1Q9H173 461 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 IL25Q9H293 177 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 BOLA2Q9H3K6 86 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 BICC1Q9H694 974 aaKnown RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 TTC12Q9H892 705 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 LGR6Q9HBX8 967 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 ANO10Q9NW15 660 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 DACT1Q9NYF0 836 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 CGNQ9P2M7 1197 aaKnown RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 CLIP2Q9UDT6 1046 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 TPCN1Q9ULQ1 816 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 PA2G4Q9UQ80 394 aaKnown RBP3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 PAXBP1Q9Y5B6 917 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 SH3TC1Q8TE82 1336 aa3.92□□□□□ -1.78
HMGN1P18-201ENST00000457642 COL15A1P39059 1388 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZNF142P52746 1687 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 A0A0D9SFI3 127 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 NEURL1BA8MQ27 555 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 DHX16O60231 1041 aaKnown RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 ANXA1P04083 346 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 TUBB4AP04350 444 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 SNRPA1P09661 255 aaKnown RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 CEBPAP49715 358 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZNF165P49910 485 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZNF75DP51815 510 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 GSDMDP57764 484 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 STK3Q13188 491 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 GCKRQ14397 625 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 TPD52L1Q16890 204 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 CWF19L2Q2TBE0 894 aaKnown RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 ADCK5Q3MIX3 580 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 MCMDC2Q4G0Z9 681 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 TNNI3KQ59H18 835 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 LMOD2Q6P5Q4 547 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 RBM43Q6ZSC3 357 aaKnown RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 TTC6Q86TZ1 520 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 CKAP2LQ8IYA6 745 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 CCDC112Q8NEF3 446 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 KIAA1524Q8TCG1 905 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 LEO1Q8WVC0 666 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 BRF1Q92994 677 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 EAF2Q96CJ1 260 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 FAM227BQ96M60 508 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZNF830Q96NB3 372 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 FMNL2Q96PY5 1086 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 DNAJC2Q99543 621 aaKnown RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 FEZ1Q99689 392 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 MYD88Q99836 296 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 LARP6Q9BRS8 491 aaKnown RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 METTL22Q9BUU2 404 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 CBX8Q9HC52 389 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 COPRSQ9NQ92 184 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 HELLSQ9NRZ9 838 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 CTNNA3Q9UI47 895 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 NAP1L2Q9ULW6 460 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 CHMP3Q9Y3E7 222 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 MRVI1Q9Y6F6 885 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 FPGT-TNNI3KV9GXZ4 949 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 SIPA1L3O60292 1781 aaPredicted RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 AFDNP55196 1824 aaKnown RBP3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 SPEF2Q9C093 1822 aa3.91□□□□□ -1.78
HMGN1P18-201ENST00000457642 ADAMTS7Q9UKP4 1686 aa3.9□□□□□ -1.78
HMGN1P18-201ENST00000457642 PALLDQ8WX93 1383 aa3.9□□□□□ -1.78
HMGN1P18-201ENST00000457642 HEG1Q9ULI3 1381 aa3.9□□□□□ -1.78
HMGN1P18-201ENST00000457642 NPHP4O75161 1426 aaPredicted RBP3.9□□□□□ -1.78
HMGN1P18-201ENST00000457642 RGPD2P0DJD1 1756 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 KCNQ3O43525 872 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 PFKFB2O60825 505 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 TAF5LO75529 589 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 SASH1O94885 1247 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 GCP02774 474 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 CSB-PGBD3P0DP91 1061 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 TNNT1P13805 278 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 LIG1P18858 919 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 PTGS1P23219 599 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 FAM160A1Q05DH4 1040 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 RESTQ13127 1097 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 TOB2Q14106 344 aaPredicted RBP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 STK38Q15208 465 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 SF3A1Q15459 793 aaKnown RBP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 CAMK4Q16566 473 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 UTP14CQ5TAP6 766 aaKnown RBP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 USPL1Q5W0Q7 1092 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 ZNF790Q6PG37 636 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 SARM1Q6SZW1 724 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 ANKRD13DQ6ZTN6 518 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 Q6ZUG5 572 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 DHX32Q7L7V1 743 aaKnown RBP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCDC186Q7Z3E2 898 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 LUZP1Q86V48 1076 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 ARHGEF25Q86VW2 580 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 PLA2G4DQ86XP0 818 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 CCAR1Q8IX12 1150 aaKnown RBP3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 IFNL2Q8IZJ0 200 aa3.9□□□□□ -1.79
HMGN1P18-201ENST00000457642 MPNDQ8N594 471 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms