RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 CCDC152Q4G0S7 254 aa25.85■■□□□ 1.73
FAM3A-217ENST00000457212 ITPRIPQ8IWB1 547 aa25.85■■□□□ 1.73
FAM3A-217ENST00000457212 RBM17Q96I25 401 aaKnown RBP25.85■■□□□ 1.73
FAM3A-217ENST00000457212 CRAMP1Q96RY5 1269 aa25.84■■□□□ 1.73
FAM3A-217ENST00000457212 MVPQ14764 893 aaKnown RBP25.83■■□□□ 1.73
FAM3A-217ENST00000457212 DDX46Q7L014 1031 aaKnown RBP25.83■■□□□ 1.73
FAM3A-217ENST00000457212 TTLL6Q8N841 843 aa25.83■■□□□ 1.73
FAM3A-217ENST00000457212 TTLL11Q8NHH1 800 aa25.83■■□□□ 1.73
FAM3A-217ENST00000457212 SUCLG2Q96I99 432 aa25.83■■□□□ 1.73
FAM3A-217ENST00000457212 MEIS3Q99687 375 aa25.83■■□□□ 1.73
FAM3A-217ENST00000457212 CSF1RP07333 972 aa25.82■■□□□ 1.72
FAM3A-217ENST00000457212 FOXO4P98177 505 aa25.82■■□□□ 1.72
FAM3A-217ENST00000457212 DALRD3Q5D0E6 543 aaKnown RBP25.82■■□□□ 1.72
FAM3A-217ENST00000457212 RTL9Q8NET4 1388 aa25.82■■□□□ 1.72
FAM3A-217ENST00000457212 CHMP4BQ9H444 224 aaKnown RBP25.81■■□□□ 1.72
FAM3A-217ENST00000457212 DDX19BQ9UMR2 479 aa25.81■■□□□ 1.72
FAM3A-217ENST00000457212 ZBTB7BO15156 539 aaPredicted RBP25.8■■□□□ 1.72
FAM3A-217ENST00000457212 C20orf194Q5TEA3 1177 aa25.8■■□□□ 1.72
FAM3A-217ENST00000457212 KAZALD1Q96I82 304 aa25.8■■□□□ 1.72
FAM3A-217ENST00000457212 EPHA10Q5JZY3 1008 aa25.79■■□□□ 1.72
FAM3A-217ENST00000457212 COG6Q9Y2V7 657 aa25.79■■□□□ 1.72
FAM3A-217ENST00000457212 GRAPQ13588 217 aa25.78■■□□□ 1.72
FAM3A-217ENST00000457212 RABL6Q3YEC7 729 aaPredicted RBP25.78■■□□□ 1.72
FAM3A-217ENST00000457212 LMBR1LQ6UX01 489 aa25.78■■□□□ 1.72
FAM3A-217ENST00000457212 GRAPLQ8TC17 118 aaPredicted RBP25.78■■□□□ 1.72
FAM3A-217ENST00000457212 BICC1Q9H694 974 aaKnown RBP25.78■■□□□ 1.72
FAM3A-217ENST00000457212 SUPT16HQ9Y5B9 1047 aaKnown RBP25.78■■□□□ 1.72
FAM3A-217ENST00000457212 BBOX1O75936 387 aa25.77■■□□□ 1.72
FAM3A-217ENST00000457212 GNAI2P04899 355 aa25.77■■□□□ 1.72
FAM3A-217ENST00000457212 PRPF40BQ6NWY9 871 aaKnown RBP25.77■■□□□ 1.72
FAM3A-217ENST00000457212 GREM2Q9H772 168 aa25.77■■□□□ 1.72
FAM3A-217ENST00000457212 BCS1LQ9Y276 419 aa25.77■■□□□ 1.72
FAM3A-217ENST00000457212 LRRFIP2Q9Y608 721 aaKnown RBP25.77■■□□□ 1.72
FAM3A-217ENST00000457212 CENPBP07199 599 aaPredicted RBP25.76■■□□□ 1.71
FAM3A-217ENST00000457212 CCDC85AQ96PX6 553 aaPredicted RBP25.76■■□□□ 1.71
FAM3A-217ENST00000457212 ARFGEF1Q9Y6D6 1849 aa25.76■■□□□ 1.71
FAM3A-217ENST00000457212 CACNA1SQ13698 1873 aa25.75■■□□□ 1.71
FAM3A-217ENST00000457212 SLX4Q8IY92 1834 aa25.75■■□□□ 1.71
FAM3A-217ENST00000457212 FAM161AQ3B820 660 aa25.75■■□□□ 1.71
FAM3A-217ENST00000457212 TMC4Q7Z404 712 aa25.75■■□□□ 1.71
FAM3A-217ENST00000457212 ANKRD44Q8N8A2 993 aa25.75■■□□□ 1.71
FAM3A-217ENST00000457212 CDC5LQ99459 802 aaKnown RBP25.75■■□□□ 1.71
FAM3A-217ENST00000457212 WWC3Q9ULE0 1092 aa25.75■■□□□ 1.71
FAM3A-217ENST00000457212 CHMP3Q9Y3E7 222 aa25.75■■□□□ 1.71
FAM3A-217ENST00000457212 IFIT5Q13325 482 aaKnown RBP25.74■■□□□ 1.71
FAM3A-217ENST00000457212 SEC31BQ9NQW1 1179 aa25.74■■□□□ 1.71
FAM3A-217ENST00000457212 ANKRD18BA2A2Z9 1011 aa25.73■■□□□ 1.71
FAM3A-217ENST00000457212 DCAF8L1A6NGE4 600 aa25.73■■□□□ 1.71
FAM3A-217ENST00000457212 PPEF1O14829 653 aaPredicted RBP25.73■■□□□ 1.71
FAM3A-217ENST00000457212 ITGA6P23229 1130 aa25.73■■□□□ 1.71
FAM3A-217ENST00000457212 RPS8P62241 208 aaKnown RBP25.73■■□□□ 1.71
FAM3A-217ENST00000457212 GPR162Q16538 588 aa25.73■■□□□ 1.71
FAM3A-217ENST00000457212 CCDC57Q2TAC2 916 aa25.73■■□□□ 1.71
FAM3A-217ENST00000457212 PELP1Q8IZL8 1130 aaKnown RBP25.73■■□□□ 1.71
FAM3A-217ENST00000457212 CELF1Q92879 486 aaKnown RBP25.73■■□□□ 1.71
FAM3A-217ENST00000457212 SOGA3Q5TF21 947 aa25.72■■□□□ 1.71
FAM3A-217ENST00000457212 ANKRD18AQ8IVF6 992 aa25.72■■□□□ 1.71
FAM3A-217ENST00000457212 TAF1P21675 1872 aa25.71■■□□□ 1.71
FAM3A-217ENST00000457212 CC2D2BQ6DHV5 1058 aa25.71■■□□□ 1.71
FAM3A-217ENST00000457212 C7orf43Q8WVR3 580 aa25.71■■□□□ 1.71
FAM3A-217ENST00000457212 TMX4Q9H1E5 349 aaPredicted RBP25.71■■□□□ 1.71
FAM3A-217ENST00000457212 YBX3P16989 372 aaKnown RBP eCLIP25.7■■□□□ 1.76e-6■□□□□ 10.6
FAM3A-217ENST00000457212 MTX1Q13505 466 aa25.7■■□□□ 1.7
FAM3A-217ENST00000457212 ZBTB40Q9NUA8 1239 aa25.7■■□□□ 1.7
FAM3A-217ENST00000457212 ATP6V0A2Q9Y487 856 aa25.7■■□□□ 1.7
FAM3A-217ENST00000457212 C21orf2O43822 256 aa25.69■■□□□ 1.7
FAM3A-217ENST00000457212 GRIN3BO60391 1043 aa25.69■■□□□ 1.7
FAM3A-217ENST00000457212 IGHMBP2P38935 993 aaKnown RBP25.69■■□□□ 1.7
FAM3A-217ENST00000457212 GRIPAP1Q4V328 841 aa25.69■■□□□ 1.7
FAM3A-217ENST00000457212 SP8Q8IXZ3 490 aa25.69■■□□□ 1.7
FAM3A-217ENST00000457212 CCDC93Q567U6 631 aa25.67■■□□□ 1.7
FAM3A-217ENST00000457212 TAF7LQ5H9L4 462 aa25.67■■□□□ 1.7
FAM3A-217ENST00000457212 BSDC1Q9NW68 430 aaPredicted RBP25.67■■□□□ 1.7
FAM3A-217ENST00000457212 COL4A1P02462 1669 aa25.67■■□□□ 1.7
FAM3A-217ENST00000457212 MPHOSPH8Q99549 860 aa25.66■■□□□ 1.7
FAM3A-217ENST00000457212 ZNF219Q9P2Y4 722 aaPredicted RBP25.66■■□□□ 1.7
FAM3A-217ENST00000457212 LRRC37AA6NMS7 1700 aa25.66■■□□□ 1.7
FAM3A-217ENST00000457212 RTKN2Q8IZC4 609 aa25.65■■□□□ 1.7
FAM3A-217ENST00000457212 CRBNQ96SW2 442 aa25.65■■□□□ 1.7
FAM3A-217ENST00000457212 C1orf115Q9H7X2 142 aa25.65■■□□□ 1.7
FAM3A-217ENST00000457212 RFX5P48382 616 aaPredicted RBP25.64■■□□□ 1.7
FAM3A-217ENST00000457212 SRGAP3O43295 1099 aa25.63■■□□□ 1.69
FAM3A-217ENST00000457212 ATP8B2P98198 1209 aa25.63■■□□□ 1.69
FAM3A-217ENST00000457212 SPEF2Q9C093 1822 aa25.63■■□□□ 1.69
FAM3A-217ENST00000457212 AAMPQ13685 434 aa25.62■■□□□ 1.69
FAM3A-217ENST00000457212 LDHAL6AQ6ZMR3 332 aa25.62■■□□□ 1.69
FAM3A-217ENST00000457212 ARHGAP27Q6ZUM4 889 aa25.62■■□□□ 1.69
FAM3A-217ENST00000457212 RPAP2Q8IXW5 612 aaPredicted RBP25.62■■□□□ 1.69
FAM3A-217ENST00000457212 ZNF594Q96JF6 807 aaPredicted RBP25.62■■□□□ 1.69
FAM3A-217ENST00000457212 SNED1Q8TER0 1413 aa25.62■■□□□ 1.69
FAM3A-217ENST00000457212 CEP85Q6P2H3 762 aa25.61■■□□□ 1.69
FAM3A-217ENST00000457212 FBXO3Q9UK99 471 aa25.61■■□□□ 1.69
FAM3A-217ENST00000457212 FER1L6Q2WGJ9 1857 aa25.61■■□□□ 1.69
FAM3A-217ENST00000457212 PTPN12Q05209 780 aaKnown RBP25.6■■□□□ 1.69
FAM3A-217ENST00000457212 OLFM4Q6UX06 510 aa25.6■■□□□ 1.69
FAM3A-217ENST00000457212 MPNDQ8N594 471 aa25.6■■□□□ 1.69
FAM3A-217ENST00000457212 COPRSQ9NQ92 184 aa25.6■■□□□ 1.69
FAM3A-217ENST00000457212 CNNM1Q9NRU3 951 aa25.6■■□□□ 1.69
FAM3A-217ENST00000457212 MINPP1Q9UNW1 487 aa25.6■■□□□ 1.69
FAM3A-217ENST00000457212 GOLGB1Q14789 3259 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms