RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
THBS3-203ENST00000457183 ZNF710Q8N1W2 664 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 SRCIN1Q9C0H9 1055 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 DDX21Q9NR30 783 aaKnown RBP eCLIP11.72□□□□□ -0.53
THBS3-203ENST00000457183 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 ZNF831Q5JPB2 1677 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 TCHHQ07283 1943 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 PNMA6EA0A0J9YXQ4 647 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
THBS3-203ENST00000457183 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
THBS3-203ENST00000457183 CCDC183Q5T5S1 534 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 IL25Q9H293 177 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 CHPF2Q9P2E5 772 aa11.72□□□□□ -0.53
THBS3-203ENST00000457183 NHSQ6T4R5 1651 aa11.71□□□□□ -0.53
THBS3-203ENST00000457183 HMGN5P82970 282 aaKnown RBP11.71□□□□□ -0.53
THBS3-203ENST00000457183 TMEM87AQ8NBN3 555 aa11.71□□□□□ -0.53
THBS3-203ENST00000457183 ATG3Q9NT62 314 aa11.71□□□□□ -0.53
THBS3-203ENST00000457183 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.54
THBS3-203ENST00000457183 NECTIN2Q92692 538 aa11.71□□□□□ -0.54
THBS3-203ENST00000457183 CNPY2Q9Y2B0 182 aa11.71□□□□□ -0.54
THBS3-203ENST00000457183 TUBGCP6Q96RT7 1819 aa11.71□□□□□ -0.54
THBS3-203ENST00000457183 GTF2F1P35269 517 aaKnown RBP eCLIP11.7□□□□□ -0.54
THBS3-203ENST00000457183 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
THBS3-203ENST00000457183 RPAP1Q9BWH6 1393 aaPredicted RBP11.7□□□□□ -0.54
THBS3-203ENST00000457183 HSPA4P34932 840 aa11.7□□□□□ -0.54
THBS3-203ENST00000457183 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
THBS3-203ENST00000457183 PAXIP1Q6ZW49 1069 aaPredicted RBP11.7□□□□□ -0.54
THBS3-203ENST00000457183 RREB1Q92766 1687 aa11.7□□□□□ -0.54
THBS3-203ENST00000457183 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
THBS3-203ENST00000457183 R3HDM1Q15032 1099 aaKnown RBP11.69□□□□□ -0.54
THBS3-203ENST00000457183 PDIA6Q15084 440 aa11.69□□□□□ -0.54
THBS3-203ENST00000457183 ASAP1Q9ULH1 1129 aa11.69□□□□□ -0.54
THBS3-203ENST00000457183 PLSCR1O15162 318 aa11.69□□□□□ -0.54
THBS3-203ENST00000457183 ZSCAN20P17040 1043 aaPredicted RBP11.69□□□□□ -0.54
THBS3-203ENST00000457183 CBX1P83916 185 aa11.69□□□□□ -0.54
THBS3-203ENST00000457183 ATP8B2P98198 1209 aa11.69□□□□□ -0.54
THBS3-203ENST00000457183 SPTLC3Q9NUV7 552 aa11.69□□□□□ -0.54
THBS3-203ENST00000457183 USP16Q9Y5T5 823 aa11.69□□□□□ -0.54
THBS3-203ENST00000457183 KDM4AO75164 1064 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 LETM1O95202 739 aaPredicted RBP11.68□□□□□ -0.54
THBS3-203ENST00000457183 DDX58O95786 925 aaKnown RBP11.68□□□□□ -0.54
THBS3-203ENST00000457183 ZSCAN22P10073 491 aaPredicted RBP11.68□□□□□ -0.54
THBS3-203ENST00000457183 UBE2HP62256 183 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 NBPF14Q5TI25 921 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 SMARCC1Q92922 1105 aaPredicted RBP11.68□□□□□ -0.54
THBS3-203ENST00000457183 TJP1Q07157 1748 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 NUP188Q5SRE5 1749 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 GNAI3P08754 354 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 DMTNQ08495 405 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 PHAXQ9H814 394 aaKnown RBP11.68□□□□□ -0.54
THBS3-203ENST00000457183 KIF3AQ9Y496 699 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 BTAF1O14981 1849 aa11.68□□□□□ -0.54
THBS3-203ENST00000457183 TULP1O00294 542 aaPredicted RBP11.67□□□□□ -0.54
THBS3-203ENST00000457183 PTCD1O75127 700 aaKnown RBP11.67□□□□□ -0.54
THBS3-203ENST00000457183 SYT1P21579 422 aa11.67□□□□□ -0.54
THBS3-203ENST00000457183 RGPD3A6NKT7 1758 aaPredicted RBP11.67□□□□□ -0.54
THBS3-203ENST00000457183 RGPD4Q7Z3J3 1758 aa11.67□□□□□ -0.54
THBS3-203ENST00000457183 EPB41L2O43491 1005 aaKnown RBP11.67□□□□□ -0.54
THBS3-203ENST00000457183 STX6O43752 255 aa11.67□□□□□ -0.54
THBS3-203ENST00000457183 PLCB2Q00722 1185 aa11.67□□□□□ -0.54
THBS3-203ENST00000457183 LARP6Q9BRS8 491 aaKnown RBP11.67□□□□□ -0.54
THBS3-203ENST00000457183 IL1RAPL2Q9NP60 686 aa11.67□□□□□ -0.54
THBS3-203ENST00000457183 FIBPO43427 364 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 STARD3NLO95772 234 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 TXNRD1Q16881 649 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 LRP10Q7Z4F1 713 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 LRRFIP2Q9Y608 721 aaKnown RBP11.66□□□□□ -0.54
THBS3-203ENST00000457183 PROSER3Q2NL68 480 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 GIMAP6Q6P9H5 292 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 TTC14Q96N46 770 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 DTNBO60941 627 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 MAP4K4O95819 1239 aaPredicted RBP11.66□□□□□ -0.54
THBS3-203ENST00000457183 AK2P54819 239 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 NUTM1Q86Y26 1132 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 DNAAF4Q8WXU2 420 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 FUCA2Q9BTY2 467 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 SNX14Q9Y5W7 946 aa11.66□□□□□ -0.54
THBS3-203ENST00000457183 ADCY9O60503 1353 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 RAD50Q92878 1312 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 AP5Z1O43299 807 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 F13A1P00488 732 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 ATP2B3Q16720 1220 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 PPP4R3BQ5MIZ7 849 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 RUFY3Q7L099 469 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 AOX1Q06278 1338 aa11.65□□□□□ -0.54
THBS3-203ENST00000457183 PI4KAP2A4QPH2 592 aa11.65□□□□□ -0.55
THBS3-203ENST00000457183 UTP14CQ5TAP6 766 aaKnown RBP11.65□□□□□ -0.55
THBS3-203ENST00000457183 PROM2Q8N271 834 aa11.65□□□□□ -0.55
THBS3-203ENST00000457183 PI4KAP1Q8N8J0 262 aa11.65□□□□□ -0.55
THBS3-203ENST00000457183 KIAA1524Q8TCG1 905 aa11.65□□□□□ -0.55
THBS3-203ENST00000457183 KCNF1Q9H3M0 494 aa11.65□□□□□ -0.55
THBS3-203ENST00000457183 LIMCH1Q9UPQ0 1083 aa11.65□□□□□ -0.55
THBS3-203ENST00000457183 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.65□□□□□ -0.55
THBS3-203ENST00000457183 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
THBS3-203ENST00000457183 SGSM2O43147 1006 aa11.64□□□□□ -0.55
THBS3-203ENST00000457183 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
THBS3-203ENST00000457183 SMC3Q9UQE7 1217 aa11.64□□□□□ -0.55
THBS3-203ENST00000457183 ATP6V1DQ9Y5K8 247 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms