RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PELP1Q8IZL8 1130 aaKnown RBP17.84■□□□□ 0.45
SMPD4-215ENST00000457039 TTLL11Q8NHH1 800 aa17.84■□□□□ 0.45
SMPD4-215ENST00000457039 C7orf43Q8WVR3 580 aa17.84■□□□□ 0.45
SMPD4-215ENST00000457039 KAZALD1Q96I82 304 aa17.84■□□□□ 0.45
SMPD4-215ENST00000457039 COL4A1P02462 1669 aa17.83■□□□□ 0.45
SMPD4-215ENST00000457039 CSF1RP07333 972 aa17.83■□□□□ 0.44
SMPD4-215ENST00000457039 FOXO4P98177 505 aa17.83■□□□□ 0.44
SMPD4-215ENST00000457039 EPHA10Q5JZY3 1008 aa17.83■□□□□ 0.44
SMPD4-215ENST00000457039 DZIP1LQ8IYY4 767 aaKnown RBP17.83■□□□□ 0.44
SMPD4-215ENST00000457039 TMEM57Q8N5G2 664 aa17.83■□□□□ 0.44
SMPD4-215ENST00000457039 MYH3P11055 1940 aa17.82■□□□□ 0.44
SMPD4-215ENST00000457039 RTL9Q8NET4 1388 aa17.82■□□□□ 0.44
SMPD4-215ENST00000457039 CCDC152Q4G0S7 254 aa17.82■□□□□ 0.44
SMPD4-215ENST00000457039 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
SMPD4-215ENST00000457039 SUCLG2Q96I99 432 aa17.82■□□□□ 0.44
SMPD4-215ENST00000457039 CACNA1SQ13698 1873 aa17.82■□□□□ 0.44
SMPD4-215ENST00000457039 PLIN1O60240 522 aa17.81■□□□□ 0.44
SMPD4-215ENST00000457039 GRIN3BO60391 1043 aa17.81■□□□□ 0.44
SMPD4-215ENST00000457039 GRAPQ13588 217 aa17.81■□□□□ 0.44
SMPD4-215ENST00000457039 GRAPLQ8TC17 118 aaPredicted RBP17.81■□□□□ 0.44
SMPD4-215ENST00000457039 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
SMPD4-215ENST00000457039 C21orf2O43822 256 aa17.8■□□□□ 0.44
SMPD4-215ENST00000457039 FTSJ3Q8IY81 847 aaKnown RBP17.8■□□□□ 0.44
SMPD4-215ENST00000457039 CELF1Q92879 486 aaKnown RBP17.8■□□□□ 0.44
SMPD4-215ENST00000457039 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
SMPD4-215ENST00000457039 MEIS3Q99687 375 aa17.8■□□□□ 0.44
SMPD4-215ENST00000457039 GREM2Q9H772 168 aa17.8■□□□□ 0.44
SMPD4-215ENST00000457039 SEC31BQ9NQW1 1179 aa17.8■□□□□ 0.44
SMPD4-215ENST00000457039 TAF1P21675 1872 aa17.8■□□□□ 0.44
SMPD4-215ENST00000457039 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
SMPD4-215ENST00000457039 BBOX1O75936 387 aa17.79■□□□□ 0.44
SMPD4-215ENST00000457039 RABL6Q3YEC7 729 aaPredicted RBP17.79■□□□□ 0.44
SMPD4-215ENST00000457039 SLC51AQ86UW1 340 aa17.79■□□□□ 0.44
SMPD4-215ENST00000457039 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
SMPD4-215ENST00000457039 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
SMPD4-215ENST00000457039 MS4A1P11836 297 aa17.78■□□□□ 0.44
SMPD4-215ENST00000457039 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
SMPD4-215ENST00000457039 OLFM4Q6UX06 510 aa17.78■□□□□ 0.44
SMPD4-215ENST00000457039 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
SMPD4-215ENST00000457039 UBTFL1P0CB47 393 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-215ENST00000457039 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
SMPD4-215ENST00000457039 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
SMPD4-215ENST00000457039 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-215ENST00000457039 BICC1Q9H694 974 aaKnown RBP17.77■□□□□ 0.44
SMPD4-215ENST00000457039 ZNF219Q9P2Y4 722 aaPredicted RBP17.77■□□□□ 0.44
SMPD4-215ENST00000457039 ATP6V0A2Q9Y487 856 aa17.77■□□□□ 0.44
SMPD4-215ENST00000457039 LRRC37AA6NMS7 1700 aa17.76■□□□□ 0.43
SMPD4-215ENST00000457039 GNAI3P08754 354 aa17.76■□□□□ 0.43
SMPD4-215ENST00000457039 ITGA6P23229 1130 aa17.76■□□□□ 0.43
SMPD4-215ENST00000457039 RPS8P62241 208 aaKnown RBP17.76■□□□□ 0.43
SMPD4-215ENST00000457039 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
SMPD4-215ENST00000457039 CC2D2BQ6DHV5 1058 aa17.76■□□□□ 0.43
SMPD4-215ENST00000457039 TMC4Q7Z404 712 aa17.76■□□□□ 0.43
SMPD4-215ENST00000457039 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
SMPD4-215ENST00000457039 NFKBIEO00221 500 aa17.75■□□□□ 0.43
SMPD4-215ENST00000457039 ZBTB7BO15156 539 aaPredicted RBP17.75■□□□□ 0.43
SMPD4-215ENST00000457039 RRP1P56182 461 aaKnown RBP17.75■□□□□ 0.43
SMPD4-215ENST00000457039 CCDC93Q567U6 631 aa17.75■□□□□ 0.43
SMPD4-215ENST00000457039 C20orf194Q5TEA3 1177 aa17.75■□□□□ 0.43
SMPD4-215ENST00000457039 ARHGAP27Q6ZUM4 889 aa17.75■□□□□ 0.43
SMPD4-215ENST00000457039 ITPRIPQ8IWB1 547 aa17.75■□□□□ 0.43
SMPD4-215ENST00000457039 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
SMPD4-215ENST00000457039 CDC5LQ99459 802 aaKnown RBP17.75■□□□□ 0.43
SMPD4-215ENST00000457039 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
SMPD4-215ENST00000457039 ANKRD18AQ8IVF6 992 aa17.74■□□□□ 0.43
SMPD4-215ENST00000457039 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
SMPD4-215ENST00000457039 LRRFIP2Q9Y608 721 aaKnown RBP17.74■□□□□ 0.43
SMPD4-215ENST00000457039 LTBP3Q9NS15 1303 aa17.73■□□□□ 0.43
SMPD4-215ENST00000457039 ANKRD18BA2A2Z9 1011 aa17.73■□□□□ 0.43
SMPD4-215ENST00000457039 IFIT5Q13325 482 aaKnown RBP17.73■□□□□ 0.43
SMPD4-215ENST00000457039 GRIPAP1Q4V328 841 aa17.73■□□□□ 0.43
SMPD4-215ENST00000457039 RTKN2Q8IZC4 609 aa17.73■□□□□ 0.43
SMPD4-215ENST00000457039 PRELPP51888 382 aa17.72■□□□□ 0.43
SMPD4-215ENST00000457039 RASSF7Q02833 373 aa17.72■□□□□ 0.43
SMPD4-215ENST00000457039 BSDC1Q9NW68 430 aaPredicted RBP17.72■□□□□ 0.43
SMPD4-215ENST00000457039 COG6Q9Y2V7 657 aa17.72■□□□□ 0.43
SMPD4-215ENST00000457039 CHMP3Q9Y3E7 222 aa17.72■□□□□ 0.43
SMPD4-215ENST00000457039 GNAI2P04899 355 aa17.71■□□□□ 0.43
SMPD4-215ENST00000457039 FKBP4Q02790 459 aaKnown RBP eCLIP17.71■□□□□ 0.43
SMPD4-215ENST00000457039 CCDC57Q2TAC2 916 aa17.71■□□□□ 0.43
SMPD4-215ENST00000457039 PSMD1Q99460 953 aa17.71■□□□□ 0.43
SMPD4-215ENST00000457039 TAOK3Q9H2K8 898 aa17.71■□□□□ 0.43
SMPD4-215ENST00000457039 LTBP1Q14766 1721 aa17.71■□□□□ 0.43
SMPD4-215ENST00000457039 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
SMPD4-215ENST00000457039 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
SMPD4-215ENST00000457039 RFX5P48382 616 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-215ENST00000457039 MTX1Q13505 466 aa17.7■□□□□ 0.42
SMPD4-215ENST00000457039 DDX19BQ9UMR2 479 aa17.7■□□□□ 0.42
SMPD4-215ENST00000457039 ZNF594Q96JF6 807 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-215ENST00000457039 RTFDC1Q9BY42 306 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-215ENST00000457039 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
SMPD4-215ENST00000457039 MINPP1Q9UNW1 487 aa17.69■□□□□ 0.42
SMPD4-215ENST00000457039 SPEF2Q9C093 1822 aa17.69■□□□□ 0.42
SMPD4-215ENST00000457039 SBF1O95248 1867 aa17.69■□□□□ 0.42
SMPD4-215ENST00000457039 GPSM2P81274 684 aa17.68■□□□□ 0.42
SMPD4-215ENST00000457039 MPNDQ8N594 471 aa17.68■□□□□ 0.42
SMPD4-215ENST00000457039 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
SMPD4-215ENST00000457039 ZBTB40Q9NUA8 1239 aa17.68■□□□□ 0.42
SMPD4-215ENST00000457039 PODXL2Q9NZ53 605 aa17.68■□□□□ 0.42
SMPD4-215ENST00000457039 CHD4Q14839 1912 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms