RNA–Protein interactions for RNA: ENST00000457023.1

CAPN7-205, Transcript of calpain 7, human

TSL 3

Gene CAPN7, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN7-205	ENST00000457023	APAF1	O14727	1248 aa		32.74	■■■□□ 2.83
CAPN7-205	ENST00000457023	CXCL9	Q07325	125 aa		32.74	■■■□□ 2.83
CAPN7-205	ENST00000457023	TRIM28	Q13263	835 aa	Known RBP	32.74	■■■□□ 2.83
CAPN7-205	ENST00000457023	TMC4	Q7Z404	712 aa		32.74	■■■□□ 2.83
CAPN7-205	ENST00000457023	LAMB2	P55268	1798 aa		32.73	■■■□□ 2.83
CAPN7-205	ENST00000457023	VEGFB	P49765	207 aa		32.73	■■■□□ 2.83
CAPN7-205	ENST00000457023	KIAA2012	Q0VF49	1180 aa		32.73	■■■□□ 2.83
CAPN7-205	ENST00000457023	SF3B3	Q15393	1217 aa	Known RBP	32.73	■■■□□ 2.83
CAPN7-205	ENST00000457023	FAM89A	Q96GI7	184 aa		32.73	■■■□□ 2.83
CAPN7-205	ENST00000457023	IFT57	Q9NWB7	429 aa		32.73	■■■□□ 2.83
CAPN7-205	ENST00000457023	ATP5J2-PTCD1	G3V325	749 aa		32.72	■■■□□ 2.83
CAPN7-205	ENST00000457023	ZNF428	Q96B54	188 aa		32.72	■■■□□ 2.83
CAPN7-205	ENST00000457023	TNS4	Q8IZW8	715 aa		32.71	■■■□□ 2.83
CAPN7-205	ENST00000457023	GPRC5D	Q9NZD1	345 aa		32.71	■■■□□ 2.83
CAPN7-205	ENST00000457023	RASSF10	A6NK89	507 aa		32.7	■■■□□ 2.83
CAPN7-205	ENST00000457023	GNAI1	P63096	354 aa		32.7	■■■□□ 2.83
CAPN7-205	ENST00000457023	CALD1	Q05682	793 aa	Known RBP	32.69	■■■□□ 2.82
CAPN7-205	ENST00000457023	DEFB115	Q30KQ5	88 aa		32.68	■■■□□ 2.82
CAPN7-205	ENST00000457023	ADARB2	Q9NS39	739 aa	Known RBP	32.68	■■■□□ 2.82
CAPN7-205	ENST00000457023	CIAPIN1	Q6FI81	312 aa		32.66	■■■□□ 2.82
CAPN7-205	ENST00000457023	CELF1	Q92879	486 aa	Known RBP	32.65	■■■□□ 2.82
CAPN7-205	ENST00000457023	PHAX	Q9H814	394 aa	Known RBP	32.65	■■■□□ 2.82
CAPN7-205	ENST00000457023	ELL2	O00472	640 aa	Predicted RBP	32.64	■■■□□ 2.82
CAPN7-205	ENST00000457023	GMPS	P49915	693 aa	Predicted RBP	32.64	■■■□□ 2.82
CAPN7-205	ENST00000457023	TNIP1	Q15025	636 aa		32.64	■■■□□ 2.82
CAPN7-205	ENST00000457023	RIC3	Q7Z5B4	369 aa		32.64	■■■□□ 2.82
CAPN7-205	ENST00000457023	DDX60	Q8IY21	1712 aa	Known RBP	32.64	■■■□□ 2.82
CAPN7-205	ENST00000457023	IRS4	O14654	1257 aa	Predicted RBP	32.63	■■■□□ 2.81
CAPN7-205	ENST00000457023	FOXN1	O15353	648 aa		32.63	■■■□□ 2.81
CAPN7-205	ENST00000457023	FMR1	Q06787	632 aa	Known RBP eCLIP	32.63	■■■□□ 2.81	9e-10	■□□□□ 10.5
CAPN7-205	ENST00000457023	CDHR2	Q9BYE9	1310 aa		32.62	■■■□□ 2.81
CAPN7-205	ENST00000457023	YDJC	A8MPS7	323 aa		32.62	■■■□□ 2.81
CAPN7-205	ENST00000457023	RTL5	Q5HYW3	569 aa	Predicted RBP	32.62	■■■□□ 2.81
CAPN7-205	ENST00000457023	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.62	■■■□□ 2.81
CAPN7-205	ENST00000457023	C8orf58	Q8NAV2	365 aa		32.62	■■■□□ 2.81
CAPN7-205	ENST00000457023	PGAP2	Q9UHJ9	254 aa		32.62	■■■□□ 2.81
CAPN7-205	ENST00000457023	RAD17	O75943	681 aa		32.61	■■■□□ 2.81
CAPN7-205	ENST00000457023	GOLGA2	Q08379	1002 aa		32.61	■■■□□ 2.81
CAPN7-205	ENST00000457023	CST9	Q5W186	159 aa		32.61	■■■□□ 2.81
CAPN7-205	ENST00000457023	WBP1L	Q9NX94	342 aa		32.61	■■■□□ 2.81
CAPN7-205	ENST00000457023	DUOX1	Q9NRD9	1551 aa		32.61	■■■□□ 2.81
CAPN7-205	ENST00000457023	ABT1	Q9ULW3	272 aa	Known RBP	32.6	■■■□□ 2.81
CAPN7-205	ENST00000457023	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.6	■■■□□ 2.81
CAPN7-205	ENST00000457023	TAF1	P21675	1872 aa		32.6	■■■□□ 2.81
CAPN7-205	ENST00000457023	WDR33	Q9C0J8	1336 aa	Known RBP	32.59	■■■□□ 2.81
CAPN7-205	ENST00000457023	WASHC4	Q2M389	1173 aa		32.59	■■■□□ 2.81
CAPN7-205	ENST00000457023	LRRC37A	A6NMS7	1700 aa		32.59	■■■□□ 2.81
CAPN7-205	ENST00000457023	TRAF5	O00463	557 aa		32.58	■■■□□ 2.81
CAPN7-205	ENST00000457023	RPS8	P62241	208 aa	Known RBP	32.58	■■■□□ 2.81
CAPN7-205	ENST00000457023	BCL2L13	Q9BXK5	485 aa		32.58	■■■□□ 2.81
CAPN7-205	ENST00000457023	CHMP4A	Q9BY43	222 aa		32.58	■■■□□ 2.81
CAPN7-205	ENST00000457023	POLL	Q9UGP5	575 aa		32.58	■■■□□ 2.81
CAPN7-205	ENST00000457023	GPSM2	P81274	684 aa		32.57	■■■□□ 2.8
CAPN7-205	ENST00000457023	CCDC191	Q8NCU4	936 aa		32.57	■■■□□ 2.8
CAPN7-205	ENST00000457023	PRDM10	Q9NQV6	1147 aa		32.57	■■■□□ 2.8
CAPN7-205	ENST00000457023	HIRA	P54198	1017 aa	Predicted RBP	32.56	■■■□□ 2.8
CAPN7-205	ENST00000457023	ZC3H15	Q8WU90	426 aa	Known RBP	32.56	■■■□□ 2.8
CAPN7-205	ENST00000457023	MYD88	Q99836	296 aa		32.56	■■■□□ 2.8
CAPN7-205	ENST00000457023	CNOT7	Q9UIV1	285 aa	Known RBP	32.56	■■■□□ 2.8
CAPN7-205	ENST00000457023	HSP90B1	P14625	803 aa	Known RBP	32.55	■■■□□ 2.8
CAPN7-205	ENST00000457023	CTCF	P49711	727 aa	Predicted RBP	32.55	■■■□□ 2.8
CAPN7-205	ENST00000457023	CCDC30	Q5VVM6	783 aa		32.55	■■■□□ 2.8
CAPN7-205	ENST00000457023	AIDA	Q96BJ3	306 aa		32.55	■■■□□ 2.8
CAPN7-205	ENST00000457023	COL4A1	P02462	1669 aa		32.54	■■■□□ 2.8
CAPN7-205	ENST00000457023	C6orf229	H3BNL8	230 aa		32.53	■■■□□ 2.8
CAPN7-205	ENST00000457023	PCCA	P05165	728 aa	Predicted RBP	32.53	■■■□□ 2.8
CAPN7-205	ENST00000457023	CCDC184	Q52MB2	194 aa		32.53	■■■□□ 2.8
CAPN7-205	ENST00000457023	TSPYL6	Q8N831	410 aa		32.53	■■■□□ 2.8
CAPN7-205	ENST00000457023	DPF2	Q92785	391 aa		32.53	■■■□□ 2.8
CAPN7-205	ENST00000457023	METTL22	Q9BUU2	404 aa	Predicted RBP	32.53	■■■□□ 2.8
CAPN7-205	ENST00000457023	TLL2	Q9Y6L7	1015 aa		32.53	■■■□□ 2.8
CAPN7-205	ENST00000457023	TBC1D16	Q8TBP0	767 aa		32.52	■■■□□ 2.8
CAPN7-205	ENST00000457023	PODXL2	Q9NZ53	605 aa		32.52	■■■□□ 2.8
CAPN7-205	ENST00000457023	RIMBP2	O15034	1052 aa		32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023	CAPN15	O75808	1086 aa		32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023	DDX58	O95786	925 aa	Known RBP	32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023	MAP2K1	Q02750	393 aa	Predicted RBP	32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023	CCDC27	Q2M243	656 aa		32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023	EYA3	Q99504	573 aa		32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023	DBNDD1	Q9H9R9	158 aa		32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023	SEC31B	Q9NQW1	1179 aa		32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023	CWC25	Q9NXE8	425 aa	Predicted RBP	32.51	■■■□□ 2.79
CAPN7-205	ENST00000457023		H7C1D1	291 aa		32.5	■■■□□ 2.79
CAPN7-205	ENST00000457023	PSMD14	O00487	310 aa		32.5	■■■□□ 2.79
CAPN7-205	ENST00000457023	PDE8A	O60658	829 aa		32.5	■■■□□ 2.79
CAPN7-205	ENST00000457023	TRPM4	Q8TD43	1214 aa		32.5	■■■□□ 2.79
CAPN7-205	ENST00000457023	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.5	■■■□□ 2.79
CAPN7-205	ENST00000457023	SHTN1	A0MZ66	631 aa		32.49	■■■□□ 2.79
CAPN7-205	ENST00000457023	ECE1	P42892	770 aa		32.49	■■■□□ 2.79
CAPN7-205	ENST00000457023	CAPNS2	Q96L46	248 aa		32.49	■■■□□ 2.79
CAPN7-205	ENST00000457023	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.49	■■■□□ 2.79
CAPN7-205	ENST00000457023	CCDC152	Q4G0S7	254 aa		32.48	■■■□□ 2.79
CAPN7-205	ENST00000457023	MICALL2	Q8IY33	904 aa		32.48	■■■□□ 2.79
CAPN7-205	ENST00000457023	CDC37L1	Q7L3B6	337 aa		32.47	■■■□□ 2.79
CAPN7-205	ENST00000457023	KCNQ5	Q9NR82	932 aa		32.47	■■■□□ 2.79
CAPN7-205	ENST00000457023	MAP3K2	Q9Y2U5	619 aa		32.47	■■■□□ 2.79
CAPN7-205	ENST00000457023	ECE2	O60344	883 aa		32.46	■■■□□ 2.79
CAPN7-205	ENST00000457023	CELF2	O95319	508 aa	Known RBP	32.46	■■■□□ 2.79
CAPN7-205	ENST00000457023	DOK7	Q18PE1	504 aa		32.46	■■■□□ 2.79
CAPN7-205	ENST00000457023	CYP4F22	Q6NT55	531 aa		32.46	■■■□□ 2.79

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