RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.48■□□□□ 0.39
NT5C3A-208ENST00000456458 LAMB4A4D0S4 1761 aa17.48■□□□□ 0.39
NT5C3A-208ENST00000456458 PARP4Q9UKK3 1724 aaKnown RBP17.48■□□□□ 0.39
NT5C3A-208ENST00000456458 ELP1O95163 1332 aa17.48■□□□□ 0.39
NT5C3A-208ENST00000456458 AFDNP55196 1824 aaKnown RBP17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 VPS37CA5D8V6 355 aaPredicted RBP17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 CADPS2Q86UW7 1296 aa17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 A0A087WZG4 1122 aa17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 CYP27B1O15528 508 aa17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 ST3GAL1Q11201 340 aa17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 UBE3BQ7Z3V4 1068 aa17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 HAUS7Q99871 368 aa17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 DBNLQ9UJU6 430 aaKnown RBP17.47■□□□□ 0.39
NT5C3A-208ENST00000456458 ARFGEF2Q9Y6D5 1785 aa17.46■□□□□ 0.39
NT5C3A-208ENST00000456458 TFCP2Q12800 502 aa17.46■□□□□ 0.39
NT5C3A-208ENST00000456458 NECAB1Q8N987 351 aa17.46■□□□□ 0.39
NT5C3A-208ENST00000456458 KLHDC4Q8TBB5 520 aa17.46■□□□□ 0.39
NT5C3A-208ENST00000456458 SCAND2PQ9GZW5 306 aaPredicted RBP17.46■□□□□ 0.39
NT5C3A-208ENST00000456458 GPR108Q9NPR9 543 aa17.46■□□□□ 0.39
NT5C3A-208ENST00000456458 MCMDC2Q4G0Z9 681 aa17.45■□□□□ 0.38
NT5C3A-208ENST00000456458 TMEM94Q12767 1356 aa17.45■□□□□ 0.38
NT5C3A-208ENST00000456458 RRP9O43818 475 aaKnown RBP17.44■□□□□ 0.38
NT5C3A-208ENST00000456458 HMGB1P09429 215 aaKnown RBP17.44■□□□□ 0.38
NT5C3A-208ENST00000456458 CASP7P55210 303 aa17.44■□□□□ 0.38
NT5C3A-208ENST00000456458 NEK1Q96PY6 1258 aa17.44■□□□□ 0.38
NT5C3A-208ENST00000456458 H7C1W4 665 aa17.44■□□□□ 0.38
NT5C3A-208ENST00000456458 TOB2Q14106 344 aaPredicted RBP17.44■□□□□ 0.38
NT5C3A-208ENST00000456458 ZNF589Q86UQ0 364 aaPredicted RBP17.44■□□□□ 0.38
NT5C3A-208ENST00000456458 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
NT5C3A-208ENST00000456458 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
NT5C3A-208ENST00000456458 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
NT5C3A-208ENST00000456458 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
NT5C3A-208ENST00000456458 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 CCDC192P0DO97 292 aa17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 KIAA2012Q0VF49 1180 aa17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 KBTBD3Q8NAB2 608 aa17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 HELLSQ9NRZ9 838 aa17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 CWC25Q9NXE8 425 aaPredicted RBP17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 PCDH11XQ9BZA7 1347 aa17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 PCDH11YQ9BZA8 1340 aa17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 PALLDQ8WX93 1383 aa17.42■□□□□ 0.38
NT5C3A-208ENST00000456458 KDM4AO75164 1064 aa17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 TPM3P06753 285 aa17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 ATG3Q9NT62 314 aa17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 PTCD1O75127 700 aaKnown RBP17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 HCLS1P14317 486 aaPredicted RBP17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 LMBR1LQ6UX01 489 aa17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 GTF3C6Q969F1 213 aa17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 LLPHQ9BRT6 129 aaKnown RBP17.41■□□□□ 0.38
NT5C3A-208ENST00000456458 GOLGA6L4A6NEF3 574 aa17.4■□□□□ 0.38
NT5C3A-208ENST00000456458 FOXO4P98177 505 aa17.4■□□□□ 0.38
NT5C3A-208ENST00000456458 CHRNA2Q15822 529 aa17.4■□□□□ 0.38
NT5C3A-208ENST00000456458 CDC37L1Q7L3B6 337 aa17.4■□□□□ 0.38
NT5C3A-208ENST00000456458 CCDC191Q8NCU4 936 aa17.4■□□□□ 0.38
NT5C3A-208ENST00000456458 ZSCAN16Q9H4T2 348 aaPredicted RBP17.4■□□□□ 0.38
NT5C3A-208ENST00000456458 KIF3AQ9Y496 699 aa17.4■□□□□ 0.38
NT5C3A-208ENST00000456458 ZNF609O15014 1411 aa17.39■□□□□ 0.37
NT5C3A-208ENST00000456458 ADCY5O95622 1261 aa17.39■□□□□ 0.37
NT5C3A-208ENST00000456458 LRRFIP1Q32MZ4 808 aaKnown RBP17.39■□□□□ 0.37
NT5C3A-208ENST00000456458 DSCC1Q9BVC3 393 aa17.39■□□□□ 0.37
NT5C3A-208ENST00000456458 DDX19AQ9NUU7 478 aaKnown RBP17.39■□□□□ 0.37
NT5C3A-208ENST00000456458 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
NT5C3A-208ENST00000456458 GLI3P10071 1580 aa17.39■□□□□ 0.37
NT5C3A-208ENST00000456458 CIAO1O76071 339 aa17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 MAP3K11Q16584 847 aa17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 GIMAP6Q6P9H5 292 aa17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 TTC6Q86TZ1 520 aa17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 ZCRB1Q8TBF4 217 aaKnown RBP17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 NUP62CLQ9H1M0 184 aa17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 HSP90AA2PQ14568 343 aaPredicted RBP17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 CABLES1Q8TDN4 633 aa17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 JARID2Q92833 1246 aaPredicted RBP17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 SPATA32Q96LK8 384 aa17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.38■□□□□ 0.37
NT5C3A-208ENST00000456458 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 NKX1-1Q15270 411 aaPredicted RBP17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 Q6ZUG5 572 aa17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 DDX17Q92841 729 aaKnown RBP17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 PAG1Q9NWQ8 432 aa17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 FBXO3Q9UK99 471 aa17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 CFAP45Q9UL16 551 aa17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 R3HCC1Q9Y3T6 440 aaKnown RBP17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 WDR17Q8IZU2 1322 aa17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 SPEF2Q9C093 1822 aa17.37■□□□□ 0.37
NT5C3A-208ENST00000456458 GOLGA6L6A8MZA4 724 aa17.36■□□□□ 0.37
NT5C3A-208ENST00000456458 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
NT5C3A-208ENST00000456458 CYP21A2P08686 494 aa17.36■□□□□ 0.37
NT5C3A-208ENST00000456458 PIP4K2AP48426 406 aaPredicted RBP17.36■□□□□ 0.37
NT5C3A-208ENST00000456458 HMGN5P82970 282 aaKnown RBP17.36■□□□□ 0.37
NT5C3A-208ENST00000456458 NBPF14Q5TI25 921 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms