RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 H7C1W4 665 aa17.82■□□□□ 0.44
LINC01563-201ENST00000456235 PDE8AO60658 829 aa17.82■□□□□ 0.44
LINC01563-201ENST00000456235 HOXA10P31260 410 aaPredicted RBP17.82■□□□□ 0.44
LINC01563-201ENST00000456235 CTSWP56202 376 aa17.82■□□□□ 0.44
LINC01563-201ENST00000456235 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
LINC01563-201ENST00000456235 KIF16BQ96L93 1317 aa17.81■□□□□ 0.44
LINC01563-201ENST00000456235 NBPF7P0C2Y1 421 aaPredicted RBP17.81■□□□□ 0.44
LINC01563-201ENST00000456235 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
LINC01563-201ENST00000456235 FAM161AQ3B820 660 aa17.81■□□□□ 0.44
LINC01563-201ENST00000456235 EPHA10Q5JZY3 1008 aa17.81■□□□□ 0.44
LINC01563-201ENST00000456235 ZNF526Q8TF50 670 aaPredicted RBP17.81■□□□□ 0.44
LINC01563-201ENST00000456235 C7orf43Q8WVR3 580 aa17.81■□□□□ 0.44
LINC01563-201ENST00000456235 GREM2Q9H772 168 aa17.81■□□□□ 0.44
LINC01563-201ENST00000456235 GRM8O00222 908 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 TRIM27P14373 513 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 GRAPQ13588 217 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
LINC01563-201ENST00000456235 C9orf131Q5VYM1 1079 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 GRAPLQ8TC17 118 aaPredicted RBP17.8■□□□□ 0.44
LINC01563-201ENST00000456235 SUCLG2Q96I99 432 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 CRAMP1Q96RY5 1269 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 C9orf78Q9NZ63 289 aaPredicted RBP17.8■□□□□ 0.44
LINC01563-201ENST00000456235 RNF181Q9P0P0 153 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 A0A1B0GUL6 1792 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 SNED1Q8TER0 1413 aa17.8■□□□□ 0.44
LINC01563-201ENST00000456235 DUOX1Q9NRD9 1551 aa17.79■□□□□ 0.44
LINC01563-201ENST00000456235 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
LINC01563-201ENST00000456235 ALDH1L1O75891 902 aa17.79■□□□□ 0.44
LINC01563-201ENST00000456235 CCDC93Q567U6 631 aa17.79■□□□□ 0.44
LINC01563-201ENST00000456235 COL4A5P29400 1685 aa17.79■□□□□ 0.44
LINC01563-201ENST00000456235 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
LINC01563-201ENST00000456235 TTLL11Q8NHH1 800 aa17.78■□□□□ 0.44
LINC01563-201ENST00000456235 API5Q9BZZ5 524 aaKnown RBP17.78■□□□□ 0.44
LINC01563-201ENST00000456235 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
LINC01563-201ENST00000456235 ZNF277Q9NRM2 450 aaPredicted RBP17.78■□□□□ 0.44
LINC01563-201ENST00000456235 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
LINC01563-201ENST00000456235 FOXO4P98177 505 aa17.77■□□□□ 0.44
LINC01563-201ENST00000456235 GPR101Q96P66 508 aaPredicted RBP17.77■□□□□ 0.44
LINC01563-201ENST00000456235 PLIN1O60240 522 aa17.76■□□□□ 0.43
LINC01563-201ENST00000456235 BRPF1P55201 1214 aaPredicted RBP17.76■□□□□ 0.43
LINC01563-201ENST00000456235 KAZALD1Q96I82 304 aa17.76■□□□□ 0.43
LINC01563-201ENST00000456235 ATP6V0A2Q9Y487 856 aa17.76■□□□□ 0.43
LINC01563-201ENST00000456235 ZKSCAN2Q63HK3 967 aa17.75■□□□□ 0.43
LINC01563-201ENST00000456235 ATF7IPQ6VMQ6 1270 aa17.75■□□□□ 0.43
LINC01563-201ENST00000456235 TMEM57Q8N5G2 664 aa17.75■□□□□ 0.43
LINC01563-201ENST00000456235 ZNF594Q96JF6 807 aaPredicted RBP17.75■□□□□ 0.43
LINC01563-201ENST00000456235 RLBP1P12271 317 aa17.74■□□□□ 0.43
LINC01563-201ENST00000456235 ITGA6P23229 1130 aa17.74■□□□□ 0.43
LINC01563-201ENST00000456235 CCT4P50991 539 aaKnown RBP17.74■□□□□ 0.43
LINC01563-201ENST00000456235 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
LINC01563-201ENST00000456235 MEIS3Q99687 375 aa17.74■□□□□ 0.43
LINC01563-201ENST00000456235 USP44Q9H0E7 712 aa17.74■□□□□ 0.43
LINC01563-201ENST00000456235 BICC1Q9H694 974 aaKnown RBP17.74■□□□□ 0.43
LINC01563-201ENST00000456235 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
LINC01563-201ENST00000456235 LMNB1P20700 586 aa17.73■□□□□ 0.43
LINC01563-201ENST00000456235 GPSM2P81274 684 aa17.73■□□□□ 0.43
LINC01563-201ENST00000456235 FKBP4Q02790 459 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC01563-201ENST00000456235 SOGA3Q5TF21 947 aa17.73■□□□□ 0.43
LINC01563-201ENST00000456235 PANK1Q8TE04 598 aa17.73■□□□□ 0.43
LINC01563-201ENST00000456235 PLA2G12BQ9BX93 195 aa17.73■□□□□ 0.43
LINC01563-201ENST00000456235 WTIPA6NIX2 430 aaPredicted RBP17.72■□□□□ 0.43
LINC01563-201ENST00000456235 BBOX1O75936 387 aa17.72■□□□□ 0.43
LINC01563-201ENST00000456235 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
LINC01563-201ENST00000456235 RPS8P62241 208 aaKnown RBP17.72■□□□□ 0.43
LINC01563-201ENST00000456235 ANKRD18AQ8IVF6 992 aa17.72■□□□□ 0.43
LINC01563-201ENST00000456235 ANKRD44Q8N8A2 993 aa17.72■□□□□ 0.43
LINC01563-201ENST00000456235 UTYO14607 1347 aa17.72■□□□□ 0.43
LINC01563-201ENST00000456235 IPO8O15397 1037 aaKnown RBP17.71■□□□□ 0.43
LINC01563-201ENST00000456235 AOC3Q16853 763 aa17.71■□□□□ 0.43
LINC01563-201ENST00000456235 DPP8Q6V1X1 898 aaPredicted RBP17.71■□□□□ 0.43
LINC01563-201ENST00000456235 SP8Q8IXZ3 490 aa17.71■□□□□ 0.43
LINC01563-201ENST00000456235 FTSJ3Q8IY81 847 aaKnown RBP17.71■□□□□ 0.43
LINC01563-201ENST00000456235 RTKN2Q8IZC4 609 aa17.71■□□□□ 0.43
LINC01563-201ENST00000456235 ZNF784Q8NCA9 323 aaPredicted RBP17.71■□□□□ 0.43
LINC01563-201ENST00000456235 KLHDC4Q8TBB5 520 aa17.71■□□□□ 0.43
LINC01563-201ENST00000456235 ARHGAP45Q92619 1136 aa17.71■□□□□ 0.43
LINC01563-201ENST00000456235 NSFL1CQ9UNZ2 370 aaKnown RBP17.71■□□□□ 0.43
LINC01563-201ENST00000456235 LRRFIP2Q9Y608 721 aaKnown RBP17.71■□□□□ 0.43
LINC01563-201ENST00000456235 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
LINC01563-201ENST00000456235 CSF1RP07333 972 aa17.7■□□□□ 0.42
LINC01563-201ENST00000456235 MPNDQ8N594 471 aa17.7■□□□□ 0.42
LINC01563-201ENST00000456235 CDC5LQ99459 802 aaKnown RBP17.7■□□□□ 0.42
LINC01563-201ENST00000456235 LTBP3Q9NS15 1303 aa17.7■□□□□ 0.42
LINC01563-201ENST00000456235 ANKRD18BA2A2Z9 1011 aa17.69■□□□□ 0.42
LINC01563-201ENST00000456235 RIMBP2O15034 1052 aa17.69■□□□□ 0.42
LINC01563-201ENST00000456235 UBTFL1P0CB47 393 aaPredicted RBP17.69■□□□□ 0.42
LINC01563-201ENST00000456235 IARSP41252 1262 aaKnown RBP17.69■□□□□ 0.42
LINC01563-201ENST00000456235 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
LINC01563-201ENST00000456235 ITPRIPQ8IWB1 547 aa17.69■□□□□ 0.42
LINC01563-201ENST00000456235 TMX4Q9H1E5 349 aaPredicted RBP17.69■□□□□ 0.42
LINC01563-201ENST00000456235 C1orf115Q9H7X2 142 aa17.69■□□□□ 0.42
LINC01563-201ENST00000456235 ZNF541Q9H0D2 1346 aa17.69■□□□□ 0.42
LINC01563-201ENST00000456235 PPIP5K2O43314 1243 aa17.68■□□□□ 0.42
LINC01563-201ENST00000456235 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
LINC01563-201ENST00000456235 C20orf194Q5TEA3 1177 aa17.68■□□□□ 0.42
LINC01563-201ENST00000456235 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
LINC01563-201ENST00000456235 PSMD1Q99460 953 aa17.68■□□□□ 0.42
LINC01563-201ENST00000456235 ANKIB1Q9P2G1 1089 aa17.68■□□□□ 0.42
LINC01563-201ENST00000456235 POLLQ9UGP5 575 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms