RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 TAF1P21675 1872 aa21.87■■□□□ 1.09
TVP23A-202ENST00000456096 TRAF5O00463 557 aa21.86■■□□□ 1.09
TVP23A-202ENST00000456096 RUNDC1Q96C34 613 aa21.86■■□□□ 1.09
TVP23A-202ENST00000456096 ADARB2Q9NS39 739 aaKnown RBP21.86■■□□□ 1.09
TVP23A-202ENST00000456096 GMPSP49915 693 aaPredicted RBP21.85■■□□□ 1.09
TVP23A-202ENST00000456096 LBX1P52954 281 aa21.85■■□□□ 1.09
TVP23A-202ENST00000456096 GRAPQ13588 217 aa21.85■■□□□ 1.09
TVP23A-202ENST00000456096 CST9Q5W186 159 aa21.85■■□□□ 1.09
TVP23A-202ENST00000456096 GRAPLQ8TC17 118 aaPredicted RBP21.85■■□□□ 1.09
TVP23A-202ENST00000456096 KIAA2012Q0VF49 1180 aa21.84■■□□□ 1.09
TVP23A-202ENST00000456096 HDGFL1Q5TGJ6 251 aa21.84■■□□□ 1.09
TVP23A-202ENST00000456096 TRPM7Q96QT4 1865 aa21.83■■□□□ 1.09
TVP23A-202ENST00000456096 RAD17O75943 681 aa21.83■■□□□ 1.09
TVP23A-202ENST00000456096 WDR43Q15061 677 aaKnown RBP eCLIP21.83■■□□□ 1.09
TVP23A-202ENST00000456096 CIAPIN1Q6FI81 312 aa21.83■■□□□ 1.09
TVP23A-202ENST00000456096 ANKRD13DQ6ZTN6 518 aa21.83■■□□□ 1.09
TVP23A-202ENST00000456096 ADAMTS8Q9UP79 889 aa21.83■■□□□ 1.09
TVP23A-202ENST00000456096 MAP2K1Q02750 393 aaPredicted RBP21.82■■□□□ 1.08
TVP23A-202ENST00000456096 PAXIP1Q6ZW49 1069 aaPredicted RBP21.82■■□□□ 1.08
TVP23A-202ENST00000456096 PLBD2Q8NHP8 589 aa21.82■■□□□ 1.08
TVP23A-202ENST00000456096 CAPNS2Q96L46 248 aa21.82■■□□□ 1.08
TVP23A-202ENST00000456096 HSPA8P11142 646 aaKnown RBP21.81■■□□□ 1.08
TVP23A-202ENST00000456096 FAM89AQ96GI7 184 aa21.81■■□□□ 1.08
TVP23A-202ENST00000456096 ISCA1Q9BUE6 129 aa21.81■■□□□ 1.08
TVP23A-202ENST00000456096 BCL2L13Q9BXK5 485 aa21.81■■□□□ 1.08
TVP23A-202ENST00000456096 DBF4Q9UBU7 674 aaPredicted RBP21.81■■□□□ 1.08
TVP23A-202ENST00000456096 DDX60Q8IY21 1712 aaKnown RBP21.8■■□□□ 1.08
TVP23A-202ENST00000456096 ATP5J2-PTCD1G3V325 749 aa21.8■■□□□ 1.08
TVP23A-202ENST00000456096 HOXB7P09629 217 aa21.8■■□□□ 1.08
TVP23A-202ENST00000456096 GRM1Q13255 1194 aa21.8■■□□□ 1.08
TVP23A-202ENST00000456096 TNIP1Q15025 636 aa21.8■■□□□ 1.08
TVP23A-202ENST00000456096 CYP4F22Q6NT55 531 aa21.8■■□□□ 1.08
TVP23A-202ENST00000456096 TMC4Q7Z404 712 aa21.8■■□□□ 1.08
TVP23A-202ENST00000456096 YDJCA8MPS7 323 aa21.79■■□□□ 1.08
TVP23A-202ENST00000456096 ECE1P42892 770 aa21.79■■□□□ 1.08
TVP23A-202ENST00000456096 CFAP44Q96MT7 982 aa21.79■■□□□ 1.08
TVP23A-202ENST00000456096 GPR101Q96P66 508 aaPredicted RBP21.79■■□□□ 1.08
TVP23A-202ENST00000456096 PGAP2Q9UHJ9 254 aa21.79■■□□□ 1.08
TVP23A-202ENST00000456096 TLL2Q9Y6L7 1015 aa21.79■■□□□ 1.08
TVP23A-202ENST00000456096 DUOX1Q9NRD9 1551 aa21.78■■□□□ 1.08
TVP23A-202ENST00000456096 HIRAP54198 1017 aaPredicted RBP21.78■■□□□ 1.08
TVP23A-202ENST00000456096 SF3B3Q15393 1217 aaKnown RBP21.78■■□□□ 1.08
TVP23A-202ENST00000456096 RTL5Q5HYW3 569 aaPredicted RBP21.78■■□□□ 1.08
TVP23A-202ENST00000456096 DUSP27Q5VZP5 1158 aa21.78■■□□□ 1.08
TVP23A-202ENST00000456096 CELF1Q92879 486 aaKnown RBP21.78■■□□□ 1.08
TVP23A-202ENST00000456096 GLIS2Q9BZE0 524 aaPredicted RBP21.78■■□□□ 1.08
TVP23A-202ENST00000456096 HYPKQ9NX55 129 aa21.78■■□□□ 1.08
TVP23A-202ENST00000456096 CDHR2Q9BYE9 1310 aa21.78■■□□□ 1.08
TVP23A-202ENST00000456096 LRRC37AA6NMS7 1700 aa21.77■■□□□ 1.08
TVP23A-202ENST00000456096 SHTN1A0MZ66 631 aa21.77■■□□□ 1.08
TVP23A-202ENST00000456096 CELF2O95319 508 aaKnown RBP21.77■■□□□ 1.08
TVP23A-202ENST00000456096 MBIPQ9NS73 344 aa21.77■■□□□ 1.08
TVP23A-202ENST00000456096 CNOT7Q9UIV1 285 aaKnown RBP21.77■■□□□ 1.08
TVP23A-202ENST00000456096 NSFL1CQ9UNZ2 370 aaKnown RBP21.77■■□□□ 1.08
TVP23A-202ENST00000456096 TRPM4Q8TD43 1214 aa21.76■■□□□ 1.07
TVP23A-202ENST00000456096 THSD7BQ9C0I4 1608 aa21.76■■□□□ 1.07
TVP23A-202ENST00000456096 WASHC4Q2M389 1173 aa21.75■■□□□ 1.07
TVP23A-202ENST00000456096 SAPCD2Q86UD0 394 aa21.75■■□□□ 1.07
TVP23A-202ENST00000456096 ZC3H15Q8WU90 426 aaKnown RBP21.75■■□□□ 1.07
TVP23A-202ENST00000456096 H7C1D1 291 aa21.74■■□□□ 1.07
TVP23A-202ENST00000456096 IRS4O14654 1257 aaPredicted RBP21.74■■□□□ 1.07
TVP23A-202ENST00000456096 RIMBP2O15034 1052 aa21.74■■□□□ 1.07
TVP23A-202ENST00000456096 AOC2O75106 756 aa21.74■■□□□ 1.07
TVP23A-202ENST00000456096 TRIM28Q13263 835 aaKnown RBP21.74■■□□□ 1.07
TVP23A-202ENST00000456096 BEGAINQ9BUH8 593 aa21.74■■□□□ 1.07
TVP23A-202ENST00000456096 POLLQ9UGP5 575 aa21.74■■□□□ 1.07
TVP23A-202ENST00000456096 ZBTB12Q9Y330 459 aaPredicted RBP21.74■■□□□ 1.07
TVP23A-202ENST00000456096 COL4A1P02462 1669 aa21.74■■□□□ 1.07
TVP23A-202ENST00000456096 C6orf229H3BNL8 230 aa21.73■■□□□ 1.07
TVP23A-202ENST00000456096 GPSM2P81274 684 aa21.73■■□□□ 1.07
TVP23A-202ENST00000456096 CDC37L1Q7L3B6 337 aa21.73■■□□□ 1.07
TVP23A-202ENST00000456096 MICALL2Q8IY33 904 aa21.73■■□□□ 1.07
TVP23A-202ENST00000456096 DBNDD1Q9H9R9 158 aa21.73■■□□□ 1.07
TVP23A-202ENST00000456096 PSMD14O00487 310 aa21.72■■□□□ 1.07
TVP23A-202ENST00000456096 ZNF853P0CG23 659 aa21.72■■□□□ 1.07
TVP23A-202ENST00000456096 MAP2K2P36507 400 aa21.72■■□□□ 1.07
TVP23A-202ENST00000456096 RIC3Q7Z5B4 369 aa21.72■■□□□ 1.07
TVP23A-202ENST00000456096 ZNF408Q9H9D4 720 aa21.72■■□□□ 1.07
TVP23A-202ENST00000456096 RPS8P62241 208 aaKnown RBP21.71■■□□□ 1.07
TVP23A-202ENST00000456096 DPF2Q92785 391 aa21.71■■□□□ 1.07
TVP23A-202ENST00000456096 KCNQ5Q9NR82 932 aa21.71■■□□□ 1.07
TVP23A-202ENST00000456096 ELL2O00472 640 aaPredicted RBP21.7■■□□□ 1.06
TVP23A-202ENST00000456096 DOK7Q18PE1 504 aa21.7■■□□□ 1.06
TVP23A-202ENST00000456096 SAMD7Q7Z3H4 446 aa21.7■■□□□ 1.06
TVP23A-202ENST00000456096 USP48Q86UV5 1035 aa21.7■■□□□ 1.06
TVP23A-202ENST00000456096 PHAXQ9H814 394 aaKnown RBP21.7■■□□□ 1.06
TVP23A-202ENST00000456096 APAF1O14727 1248 aa21.69■■□□□ 1.06
TVP23A-202ENST00000456096 GOLGA2Q08379 1002 aa21.69■■□□□ 1.06
TVP23A-202ENST00000456096 DLK2Q6UY11 383 aa21.69■■□□□ 1.06
TVP23A-202ENST00000456096 ZBTB38Q8NAP3 1195 aaPredicted RBP21.69■■□□□ 1.06
TVP23A-202ENST00000456096 TBC1D16Q8TBP0 767 aa21.69■■□□□ 1.06
TVP23A-202ENST00000456096 ABHD8Q96I13 439 aa21.69■■□□□ 1.06
TVP23A-202ENST00000456096 HHIPL1Q96JK4 782 aa21.69■■□□□ 1.06
TVP23A-202ENST00000456096 PRKRIP1Q9H875 184 aaPredicted RBP21.69■■□□□ 1.06
TVP23A-202ENST00000456096 IFT57Q9NWB7 429 aa21.69■■□□□ 1.06
TVP23A-202ENST00000456096 TSKSQ9UJT2 592 aa21.69■■□□□ 1.06
TVP23A-202ENST00000456096 ECE2O60344 883 aa21.68■■□□□ 1.06
TVP23A-202ENST00000456096 EGFRP00533 1210 aa21.68■■□□□ 1.06
TVP23A-202ENST00000456096 GNAI1P63096 354 aa21.68■■□□□ 1.06
TVP23A-202ENST00000456096 TBC1D10BQ4KMP7 808 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms