RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 KSR2Q6VAB6 950 aa22.74■■□□□ 1.23
COL13A1-206ENST00000456019 VPS33BQ9H267 617 aa22.74■■□□□ 1.23
COL13A1-206ENST00000456019 CWC25Q9NXE8 425 aaPredicted RBP22.74■■□□□ 1.23
COL13A1-206ENST00000456019 MAP3K2Q9Y2U5 619 aa22.74■■□□□ 1.23
COL13A1-206ENST00000456019 SLC4A2P04920 1241 aa22.73■■□□□ 1.23
COL13A1-206ENST00000456019 EIF6P56537 245 aaKnown RBP22.73■■□□□ 1.23
COL13A1-206ENST00000456019 DPP8Q6V1X1 898 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-206ENST00000456019 GPC2Q8N158 579 aa22.73■■□□□ 1.23
COL13A1-206ENST00000456019 MPNDQ8N594 471 aa22.73■■□□□ 1.23
COL13A1-206ENST00000456019 RTFDC1Q9BY42 306 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-206ENST00000456019 COL4A5P29400 1685 aa22.72■■□□□ 1.23
COL13A1-206ENST00000456019 PI4KAP2A4QPH2 592 aa22.72■■□□□ 1.23
COL13A1-206ENST00000456019 PPIP5K2O43314 1243 aa22.72■■□□□ 1.23
COL13A1-206ENST00000456019 PCCAP05165 728 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-206ENST00000456019 NIM1KQ8IY84 436 aa22.72■■□□□ 1.23
COL13A1-206ENST00000456019 PI4KAP1Q8N8J0 262 aa22.72■■□□□ 1.23
COL13A1-206ENST00000456019 SCN4AP35499 1836 aa22.71■■□□□ 1.23
COL13A1-206ENST00000456019 NEXNQ0ZGT2 675 aa22.71■■□□□ 1.23
COL13A1-206ENST00000456019 TAF1DQ9H5J8 278 aaPredicted RBP22.71■■□□□ 1.23
COL13A1-206ENST00000456019 EXOSC9Q06265 439 aaKnown RBP22.7■■□□□ 1.22
COL13A1-206ENST00000456019 AOC3Q16853 763 aa22.7■■□□□ 1.22
COL13A1-206ENST00000456019 G2E3Q7L622 706 aa22.7■■□□□ 1.22
COL13A1-206ENST00000456019 MYH16Q9H6N6 1097 aa22.7■■□□□ 1.22
COL13A1-206ENST00000456019 HACL1Q9UJ83 578 aa22.7■■□□□ 1.22
COL13A1-206ENST00000456019 VAMP4O75379 141 aa22.69■■□□□ 1.22
COL13A1-206ENST00000456019 CHADLQ6NUI6 762 aa22.69■■□□□ 1.22
COL13A1-206ENST00000456019 CELF1Q92879 486 aaKnown RBP22.69■■□□□ 1.22
COL13A1-206ENST00000456019 PDE8AO60658 829 aa22.68■■□□□ 1.22
COL13A1-206ENST00000456019 IGKV5-2P06315 115 aa22.68■■□□□ 1.22
COL13A1-206ENST00000456019 SPINK5Q9NQ38 1064 aaPredicted RBP22.68■■□□□ 1.22
COL13A1-206ENST00000456019 GJA3Q9Y6H8 435 aa22.68■■□□□ 1.22
COL13A1-206ENST00000456019 TAF1P21675 1872 aa22.68■■□□□ 1.22
COL13A1-206ENST00000456019 FLIIQ13045 1269 aa22.67■■□□□ 1.22
COL13A1-206ENST00000456019 CCDC152Q4G0S7 254 aa22.67■■□□□ 1.22
COL13A1-206ENST00000456019 LDHDQ86WU2 507 aa22.67■■□□□ 1.22
COL13A1-206ENST00000456019 DNAJC5GQ8N7S2 189 aa22.67■■□□□ 1.22
COL13A1-206ENST00000456019 LRRC37AA6NMS7 1700 aa22.67■■□□□ 1.22
COL13A1-206ENST00000456019 CDHR2Q9BYE9 1310 aa22.66■■□□□ 1.22
COL13A1-206ENST00000456019 POTEIP0CG38 1075 aa22.66■■□□□ 1.22
COL13A1-206ENST00000456019 POTEJP0CG39 1038 aa22.66■■□□□ 1.22
COL13A1-206ENST00000456019 EPHX2P34913 555 aa22.66■■□□□ 1.22
COL13A1-206ENST00000456019 RPS8P62241 208 aaKnown RBP22.66■■□□□ 1.22
COL13A1-206ENST00000456019 KIAA2012Q0VF49 1180 aa22.66■■□□□ 1.22
COL13A1-206ENST00000456019 JARID2Q92833 1246 aaPredicted RBP22.66■■□□□ 1.22
COL13A1-206ENST00000456019 ZNRF3Q9ULT6 936 aa22.66■■□□□ 1.22
COL13A1-206ENST00000456019 HTRA3P83110 453 aa22.65■■□□□ 1.22
COL13A1-206ENST00000456019 FKBP5Q13451 457 aaPredicted RBP22.65■■□□□ 1.22
COL13A1-206ENST00000456019 PNMA8AQ86V59 439 aaPredicted RBP22.65■■□□□ 1.22
COL13A1-206ENST00000456019 NEURL1BA8MQ27 555 aa22.64■■□□□ 1.21
COL13A1-206ENST00000456019 LMOD1P29536 600 aaPredicted RBP22.64■■□□□ 1.21
COL13A1-206ENST00000456019 CWF19L2Q2TBE0 894 aaKnown RBP22.64■■□□□ 1.21
COL13A1-206ENST00000456019 EAPPQ56P03 285 aaPredicted RBP22.64■■□□□ 1.21
COL13A1-206ENST00000456019 NSFL1CQ9UNZ2 370 aaKnown RBP22.64■■□□□ 1.21
COL13A1-206ENST00000456019 SEC31BQ9NQW1 1179 aa22.63■■□□□ 1.21
COL13A1-206ENST00000456019 DUOX1Q9NRD9 1551 aa22.63■■□□□ 1.21
COL13A1-206ENST00000456019 ZNF521Q96K83 1311 aa22.62■■□□□ 1.21
COL13A1-206ENST00000456019 COL4A1P02462 1669 aa22.62■■□□□ 1.21
COL13A1-206ENST00000456019 DNAAF4Q8WXU2 420 aa22.62■■□□□ 1.21
COL13A1-206ENST00000456019 CACNA1FO60840 1977 aa22.61■■□□□ 1.21
COL13A1-206ENST00000456019 CTSWP56202 376 aa22.61■■□□□ 1.21
COL13A1-206ENST00000456019 GPSM2P81274 684 aa22.61■■□□□ 1.21
COL13A1-206ENST00000456019 CXCL9Q07325 125 aa22.61■■□□□ 1.21
COL13A1-206ENST00000456019 WASHC4Q2M389 1173 aa22.61■■□□□ 1.21
COL13A1-206ENST00000456019 KLRG1Q96E93 195 aa22.61■■□□□ 1.21
COL13A1-206ENST00000456019 CCDC85AQ96PX6 553 aaPredicted RBP22.61■■□□□ 1.21
COL13A1-206ENST00000456019 CLEC11AQ9Y240 323 aa22.61■■□□□ 1.21
COL13A1-206ENST00000456019 C6orf229H3BNL8 230 aa22.6■■□□□ 1.21
COL13A1-206ENST00000456019 SCNN1DP51172 638 aa22.6■■□□□ 1.21
COL13A1-206ENST00000456019 H7C1W4 665 aa22.59■■□□□ 1.21
COL13A1-206ENST00000456019 GCKRQ14397 625 aa22.59■■□□□ 1.21
COL13A1-206ENST00000456019 CIAPIN1Q6FI81 312 aa22.59■■□□□ 1.21
COL13A1-206ENST00000456019 ANKRD18AQ8IVF6 992 aa22.59■■□□□ 1.21
COL13A1-206ENST00000456019 LINS1Q8NG48 757 aa22.59■■□□□ 1.21
COL13A1-206ENST00000456019 EYA3Q99504 573 aa22.59■■□□□ 1.21
COL13A1-206ENST00000456019 POLLQ9UGP5 575 aa22.59■■□□□ 1.21
COL13A1-206ENST00000456019 ADAMTSL1Q8N6G6 1762 aa22.58■■□□□ 1.21
COL13A1-206ENST00000456019 TNIP1Q15025 636 aa22.58■■□□□ 1.21
COL13A1-206ENST00000456019 UBE3BQ7Z3V4 1068 aa22.58■■□□□ 1.21
COL13A1-206ENST00000456019 TTLL11Q8NHH1 800 aa22.58■■□□□ 1.21
COL13A1-206ENST00000456019 CDC5LQ99459 802 aaKnown RBP22.58■■□□□ 1.21
COL13A1-206ENST00000456019 PODXL2Q9NZ53 605 aa22.58■■□□□ 1.21
COL13A1-206ENST00000456019 LTBP1Q14766 1721 aa22.57■■□□□ 1.2
COL13A1-206ENST00000456019 EPS15P42566 896 aa22.57■■□□□ 1.2
COL13A1-206ENST00000456019 TBC1D16Q8TBP0 767 aa22.57■■□□□ 1.2
COL13A1-206ENST00000456019 RTL9Q8NET4 1388 aa22.56■■□□□ 1.2
COL13A1-206ENST00000456019 RIMBP2O15034 1052 aa22.56■■□□□ 1.2
COL13A1-206ENST00000456019 RAD17O75943 681 aa22.56■■□□□ 1.2
COL13A1-206ENST00000456019 CREBZFQ9NS37 354 aa22.56■■□□□ 1.2
COL13A1-206ENST00000456019 GPRC5DQ9NZD1 345 aa22.56■■□□□ 1.2
COL13A1-206ENST00000456019 ANKIB1Q9P2G1 1089 aa22.56■■□□□ 1.2
COL13A1-206ENST00000456019 PASKQ96RG2 1323 aa22.56■■□□□ 1.2
COL13A1-206ENST00000456019 YDJCA8MPS7 323 aa22.55■■□□□ 1.2
COL13A1-206ENST00000456019 ITGBL1O95965 494 aaPredicted RBP22.55■■□□□ 1.2
COL13A1-206ENST00000456019 GMPSP49915 693 aaPredicted RBP22.55■■□□□ 1.2
COL13A1-206ENST00000456019 USP50Q70EL3 339 aaPredicted RBP22.55■■□□□ 1.2
COL13A1-206ENST00000456019 PLA2G12BQ9BX93 195 aa22.55■■□□□ 1.2
COL13A1-206ENST00000456019 GREM2Q9H772 168 aa22.55■■□□□ 1.2
COL13A1-206ENST00000456019 GGA1Q9UJY5 639 aa22.55■■□□□ 1.2
COL13A1-206ENST00000456019 E9PSI1 815 aa22.54■■□□□ 1.2
COL13A1-206ENST00000456019 CCER2I3L3R5 266 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms