RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 LINS1Q8NG48 757 aa20.71■□□□□ 0.91
SMPD4-214ENST00000455548 MYH3P11055 1940 aa20.7■□□□□ 0.91
SMPD4-214ENST00000455548 CT47B1P0C2W7 299 aaPredicted RBP20.69■□□□□ 0.9
SMPD4-214ENST00000455548 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
SMPD4-214ENST00000455548 ZNF277Q9NRM2 450 aaPredicted RBP20.69■□□□□ 0.9
SMPD4-214ENST00000455548 GCKRQ14397 625 aa20.68■□□□□ 0.9
SMPD4-214ENST00000455548 CCDC152Q4G0S7 254 aa20.68■□□□□ 0.9
SMPD4-214ENST00000455548 JARID2Q92833 1246 aaPredicted RBP20.68■□□□□ 0.9
SMPD4-214ENST00000455548 GLTPD2A6NH11 291 aa20.67■□□□□ 0.9
SMPD4-214ENST00000455548 F6X3S4 739 aa20.67■□□□□ 0.9
SMPD4-214ENST00000455548 H7C1W4 665 aa20.67■□□□□ 0.9
SMPD4-214ENST00000455548 ALDH1L2Q3SY69 923 aa20.67■□□□□ 0.9
SMPD4-214ENST00000455548 DPY19L2Q6NUT2 758 aa20.67■□□□□ 0.9
SMPD4-214ENST00000455548 UBE3BQ7Z3V4 1068 aa20.67■□□□□ 0.9
SMPD4-214ENST00000455548 MRPL50Q8N5N7 158 aaKnown RBP20.67■□□□□ 0.9
SMPD4-214ENST00000455548 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
SMPD4-214ENST00000455548 HNRNPUQ00839 825 aaKnown RBP eCLIP20.66■□□□□ 0.9
SMPD4-214ENST00000455548 SSH1Q8WYL5 1049 aa20.66■□□□□ 0.9
SMPD4-214ENST00000455548 LRRC37AA6NMS7 1700 aa20.66■□□□□ 0.9
SMPD4-214ENST00000455548 PTPRCP08575 1304 aa20.65■□□□□ 0.9
SMPD4-214ENST00000455548 CTSWP56202 376 aa20.65■□□□□ 0.9
SMPD4-214ENST00000455548 BEND3Q5T5X7 828 aa20.65■□□□□ 0.9
SMPD4-214ENST00000455548 SUPT20HQ8NEM7 779 aa20.65■□□□□ 0.9
SMPD4-214ENST00000455548 CELF1Q92879 486 aaKnown RBP20.65■□□□□ 0.9
SMPD4-214ENST00000455548 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
SMPD4-214ENST00000455548 KIF3CO14782 793 aa20.64■□□□□ 0.89
SMPD4-214ENST00000455548 C1QTNF8P60827 252 aa20.64■□□□□ 0.89
SMPD4-214ENST00000455548 RPS8P62241 208 aaKnown RBP20.64■□□□□ 0.89
SMPD4-214ENST00000455548 DPP8Q6V1X1 898 aaPredicted RBP20.64■□□□□ 0.89
SMPD4-214ENST00000455548 MPNDQ8N594 471 aa20.64■□□□□ 0.89
SMPD4-214ENST00000455548 VPS33BQ9H267 617 aa20.64■□□□□ 0.89
SMPD4-214ENST00000455548 ALDH1L1O75891 902 aa20.63■□□□□ 0.89
SMPD4-214ENST00000455548 SLC51AQ86UW1 340 aa20.63■□□□□ 0.89
SMPD4-214ENST00000455548 JDP2Q8WYK2 163 aa20.63■□□□□ 0.89
SMPD4-214ENST00000455548 PLA2G12BQ9BX93 195 aa20.63■□□□□ 0.89
SMPD4-214ENST00000455548 RTFDC1Q9BY42 306 aaPredicted RBP20.63■□□□□ 0.89
SMPD4-214ENST00000455548 SMC4Q9NTJ3 1288 aa20.63■□□□□ 0.89
SMPD4-214ENST00000455548 CASP7P55210 303 aa20.62■□□□□ 0.89
SMPD4-214ENST00000455548 SLC4A10Q6U841 1118 aa20.62■□□□□ 0.89
SMPD4-214ENST00000455548 TTLL11Q8NHH1 800 aa20.62■□□□□ 0.89
SMPD4-214ENST00000455548 SRCIN1Q9C0H9 1055 aa20.62■□□□□ 0.89
SMPD4-214ENST00000455548 SEC31BQ9NQW1 1179 aa20.62■□□□□ 0.89
SMPD4-214ENST00000455548 RTL9Q8NET4 1388 aa20.61■□□□□ 0.89
SMPD4-214ENST00000455548 LARGE2Q8N3Y3 721 aa20.61■□□□□ 0.89
SMPD4-214ENST00000455548 BCL2L13Q9BXK5 485 aa20.61■□□□□ 0.89
SMPD4-214ENST00000455548 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
SMPD4-214ENST00000455548 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
SMPD4-214ENST00000455548 COL4A1P02462 1669 aa20.61■□□□□ 0.89
SMPD4-214ENST00000455548 PPIP5K2O43314 1243 aa20.6■□□□□ 0.89
SMPD4-214ENST00000455548 VEGFAP15692 232 aaPredicted RBP20.6■□□□□ 0.89
SMPD4-214ENST00000455548 ANKRD18AQ8IVF6 992 aa20.6■□□□□ 0.89
SMPD4-214ENST00000455548 C16orf71Q8IYS4 520 aaPredicted RBP20.6■□□□□ 0.89
SMPD4-214ENST00000455548 CCDC85AQ96PX6 553 aaPredicted RBP20.6■□□□□ 0.89
SMPD4-214ENST00000455548 CDC5LQ99459 802 aaKnown RBP20.6■□□□□ 0.89
SMPD4-214ENST00000455548 FZD9O00144 591 aa20.59■□□□□ 0.89
SMPD4-214ENST00000455548 C9orf78Q9NZ63 289 aaPredicted RBP20.59■□□□□ 0.89
SMPD4-214ENST00000455548 GRM8O00222 908 aa20.58■□□□□ 0.89
SMPD4-214ENST00000455548 BRPF1P55201 1214 aaPredicted RBP20.58■□□□□ 0.89
SMPD4-214ENST00000455548 NIM1KQ8IY84 436 aa20.58■□□□□ 0.89
SMPD4-214ENST00000455548 TOMM70O94826 608 aa20.57■□□□□ 0.88
SMPD4-214ENST00000455548 DDNO94850 711 aaPredicted RBP20.57■□□□□ 0.88
SMPD4-214ENST00000455548 EIF6P56537 245 aaKnown RBP20.57■□□□□ 0.88
SMPD4-214ENST00000455548 AOC3Q16853 763 aa20.57■□□□□ 0.88
SMPD4-214ENST00000455548 GREM2Q9H772 168 aa20.57■□□□□ 0.88
SMPD4-214ENST00000455548 DUOX1Q9NRD9 1551 aa20.57■□□□□ 0.88
SMPD4-214ENST00000455548 NSFL1CQ9UNZ2 370 aaKnown RBP20.57■□□□□ 0.88
SMPD4-214ENST00000455548 COL4A5P29400 1685 aa20.57■□□□□ 0.88
SMPD4-214ENST00000455548 ZBED9Q6R2W3 1325 aa20.56■□□□□ 0.88
SMPD4-214ENST00000455548 ZNF541Q9H0D2 1346 aa20.56■□□□□ 0.88
SMPD4-214ENST00000455548 SPEF2Q9C093 1822 aa20.56■□□□□ 0.88
SMPD4-214ENST00000455548 CSF1RP07333 972 aa20.56■□□□□ 0.88
SMPD4-214ENST00000455548 RARSP54136 660 aaKnown RBP20.56■□□□□ 0.88
SMPD4-214ENST00000455548 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
SMPD4-214ENST00000455548 LTBP1Q14766 1721 aa20.56■□□□□ 0.88
SMPD4-214ENST00000455548 GPSM2P81274 684 aa20.55■□□□□ 0.88
SMPD4-214ENST00000455548 RBM46Q8TBY0 533 aaKnown RBP20.55■□□□□ 0.88
SMPD4-214ENST00000455548 L3MBTL3Q96JM7 780 aaPredicted RBP20.55■□□□□ 0.88
SMPD4-214ENST00000455548 BSDC1Q9NW68 430 aaPredicted RBP20.55■□□□□ 0.88
SMPD4-214ENST00000455548 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
SMPD4-214ENST00000455548 SCN4AP35499 1836 aa20.55■□□□□ 0.88
SMPD4-214ENST00000455548 C6orf229H3BNL8 230 aa20.54■□□□□ 0.88
SMPD4-214ENST00000455548 GPC2Q8N158 579 aa20.54■□□□□ 0.88
SMPD4-214ENST00000455548 EYA3Q99504 573 aa20.54■□□□□ 0.88
SMPD4-214ENST00000455548 ANKIB1Q9P2G1 1089 aa20.54■□□□□ 0.88
SMPD4-214ENST00000455548 KIF16BQ96L93 1317 aa20.53■□□□□ 0.88
SMPD4-214ENST00000455548 POTECB2RU33 542 aa20.53■□□□□ 0.88
SMPD4-214ENST00000455548 ITGA6P23229 1130 aa20.53■□□□□ 0.88
SMPD4-214ENST00000455548 IGHMBP2P38935 993 aaKnown RBP20.53■□□□□ 0.88
SMPD4-214ENST00000455548 FOXO4P98177 505 aa20.53■□□□□ 0.88
SMPD4-214ENST00000455548 WASHC4Q2M389 1173 aa20.53■□□□□ 0.88
SMPD4-214ENST00000455548 FAM161AQ3B820 660 aa20.53■□□□□ 0.88
SMPD4-214ENST00000455548 GGA1Q9UJY5 639 aa20.53■□□□□ 0.88
SMPD4-214ENST00000455548 ZNRF3Q9ULT6 936 aa20.53■□□□□ 0.88
SMPD4-214ENST00000455548 IQCA1LA6NCM1 817 aa20.52■□□□□ 0.88
SMPD4-214ENST00000455548 TBC1D16Q8TBP0 767 aa20.52■□□□□ 0.88
SMPD4-214ENST00000455548 API5Q9BZZ5 524 aaKnown RBP20.52■□□□□ 0.88
SMPD4-214ENST00000455548 POLLQ9UGP5 575 aa20.52■□□□□ 0.88
SMPD4-214ENST00000455548 NOB1Q9ULX3 412 aaKnown RBP20.52■□□□□ 0.88
SMPD4-214ENST00000455548 UTYO14607 1347 aa20.52■□□□□ 0.87
SMPD4-214ENST00000455548 XDHP47989 1333 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms