RNA–Protein interactions for RNA: ENST00000455244.2

SCDP1-201, Transcript of stearoyl-CoA desaturase pseudogene 1, humanhuman

BASIC

Gene SCDP1, Length 1,081 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCDP1-201ENST00000455244 LHX8Q68G74 356 aa9.64□□□□□ -0.87
SCDP1-201ENST00000455244 OLFM4Q6UX06 510 aa9.64□□□□□ -0.87
SCDP1-201ENST00000455244 SLC51AQ86UW1 340 aa9.64□□□□□ -0.87
SCDP1-201ENST00000455244 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
SCDP1-201ENST00000455244 MTMR14Q8NCE2 650 aa9.64□□□□□ -0.87
SCDP1-201ENST00000455244 FAM217BQ9NTX9 383 aaPredicted RBP9.64□□□□□ -0.87
SCDP1-201ENST00000455244 USP16Q9Y5T5 823 aa9.64□□□□□ -0.87
SCDP1-201ENST00000455244 UBR2Q8IWV8 1755 aa9.64□□□□□ -0.87
SCDP1-201ENST00000455244 VIRMAQ69YN4 1812 aaKnown RBP9.63□□□□□ -0.87
SCDP1-201ENST00000455244 GNAT3A8MTJ3 354 aa9.63□□□□□ -0.87
SCDP1-201ENST00000455244 H0YIN7 160 aa9.63□□□□□ -0.87
SCDP1-201ENST00000455244 STARD3NLO95772 234 aa9.63□□□□□ -0.87
SCDP1-201ENST00000455244 DCTN1Q14203 1278 aa9.63□□□□□ -0.87
SCDP1-201ENST00000455244 C16orf71Q8IYS4 520 aaPredicted RBP9.63□□□□□ -0.87
SCDP1-201ENST00000455244 ZNF622Q969S3 477 aaKnown RBP eCLIP9.63□□□□□ -0.87
SCDP1-201ENST00000455244 IVNS1ABPQ9Y6Y0 642 aa9.63□□□□□ -0.87
SCDP1-201ENST00000455244 ANKRD31Q8N7Z5 1873 aa9.63□□□□□ -0.87
SCDP1-201ENST00000455244 CEMIPQ8WUJ3 1361 aa9.63□□□□□ -0.87
SCDP1-201ENST00000455244 NBPF26B4DH59 902 aa9.62□□□□□ -0.87
SCDP1-201ENST00000455244 PRKAR2BP31323 418 aa9.62□□□□□ -0.87
SCDP1-201ENST00000455244 NBPF10Q6P3W6 841 aaKnown RBP9.62□□□□□ -0.87
SCDP1-201ENST00000455244 TTC5Q8N0Z6 440 aa9.62□□□□□ -0.87
SCDP1-201ENST00000455244 NBPF15Q8N660 670 aa9.62□□□□□ -0.87
SCDP1-201ENST00000455244 IGSF5Q9NSI5 407 aa9.62□□□□□ -0.87
SCDP1-201ENST00000455244 COL11A2P13942 1736 aaPredicted RBP9.62□□□□□ -0.87
SCDP1-201ENST00000455244 RBM47A0AV96 593 aaKnown RBP9.61□□□□□ -0.87
SCDP1-201ENST00000455244 VEGFAP15692 232 aaPredicted RBP9.61□□□□□ -0.87
SCDP1-201ENST00000455244 ABL2P42684 1182 aa9.61□□□□□ -0.87
SCDP1-201ENST00000455244 TEFQ10587 303 aa9.61□□□□□ -0.87
SCDP1-201ENST00000455244 MCM10Q7L590 875 aa9.61□□□□□ -0.87
SCDP1-201ENST00000455244 SMC1BQ8NDV3 1235 aa9.61□□□□□ -0.87
SCDP1-201ENST00000455244 DDX12PQ92771 950 aa9.61□□□□□ -0.87
SCDP1-201ENST00000455244 BRIP1Q9BX63 1249 aa9.61□□□□□ -0.87
SCDP1-201ENST00000455244 MIS18AQ9NYP9 233 aa9.61□□□□□ -0.87
SCDP1-201ENST00000455244 DLEC1Q9Y238 1755 aa9.6□□□□□ -0.87
SCDP1-201ENST00000455244 BTBD11A6QL63 1104 aa9.6□□□□□ -0.87
SCDP1-201ENST00000455244 POM121CA8CG34 1229 aa9.6□□□□□ -0.87
SCDP1-201ENST00000455244 DDNO94850 711 aaPredicted RBP9.6□□□□□ -0.87
SCDP1-201ENST00000455244 IL6STP40189 918 aaPredicted RBP9.6□□□□□ -0.87
SCDP1-201ENST00000455244 C7orf43Q8WVR3 580 aa9.6□□□□□ -0.87
SCDP1-201ENST00000455244 TMEM106CQ9BVX2 250 aa9.6□□□□□ -0.87
SCDP1-201ENST00000455244 SLX4Q8IY92 1834 aa9.6□□□□□ -0.87
SCDP1-201ENST00000455244 SIPA1L3O60292 1781 aaPredicted RBP9.6□□□□□ -0.87
SCDP1-201ENST00000455244 CCDC88AQ3V6T2 1871 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 A0A087WZG4 1122 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 SRGNP10124 158 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 HLFQ16534 295 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 ERFEQ4G0M1 354 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 PRPF40BQ6NWY9 871 aaKnown RBP9.59□□□□□ -0.87
SCDP1-201ENST00000455244 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
SCDP1-201ENST00000455244 GAS2L2Q8NHY3 880 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 FMNL2Q96PY5 1086 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 SETDB2Q96T68 719 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 VRTNQ9H8Y1 702 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 NPC1L1Q9UHC9 1359 aa9.59□□□□□ -0.87
SCDP1-201ENST00000455244 ZC3H4Q9UPT8 1303 aaKnown RBP9.58□□□□□ -0.88
SCDP1-201ENST00000455244 SCN7AQ01118 1682 aa9.58□□□□□ -0.88
SCDP1-201ENST00000455244 TNRC6CQ9HCJ0 1690 aaKnown RBP9.58□□□□□ -0.88
SCDP1-201ENST00000455244 FAM177BA6PVY3 158 aa9.58□□□□□ -0.88
SCDP1-201ENST00000455244 CD44P16070 742 aaKnown RBP9.58□□□□□ -0.88
SCDP1-201ENST00000455244 PDE6BP35913 854 aa9.58□□□□□ -0.88
SCDP1-201ENST00000455244 CNBD1Q8NA66 436 aa9.58□□□□□ -0.88
SCDP1-201ENST00000455244 PHOX2BQ99453 314 aa9.58□□□□□ -0.88
SCDP1-201ENST00000455244 GNEQ9Y223 722 aaKnown RBP9.58□□□□□ -0.88
SCDP1-201ENST00000455244 TIAM2Q8IVF5 1701 aa9.58□□□□□ -0.88
SCDP1-201ENST00000455244 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
SCDP1-201ENST00000455244 EIF5BO60841 1220 aaKnown RBP9.57□□□□□ -0.88
SCDP1-201ENST00000455244 HSPA1AP0DMV8 641 aaKnown RBP9.57□□□□□ -0.88
SCDP1-201ENST00000455244 HSPA1BP0DMV9 641 aaKnown RBP9.57□□□□□ -0.88
SCDP1-201ENST00000455244 PPP2R1AP30153 589 aa9.57□□□□□ -0.88
SCDP1-201ENST00000455244 EVX2Q03828 476 aa9.57□□□□□ -0.88
SCDP1-201ENST00000455244 TEX13AQ9BXU3 409 aaPredicted RBP9.57□□□□□ -0.88
SCDP1-201ENST00000455244 TBC1D2Q9BYX2 928 aa9.57□□□□□ -0.88
SCDP1-201ENST00000455244 TAOK3Q9H2K8 898 aa9.57□□□□□ -0.88
SCDP1-201ENST00000455244 ZNF277Q9NRM2 450 aaPredicted RBP9.57□□□□□ -0.88
SCDP1-201ENST00000455244 FER1L6Q2WGJ9 1857 aa9.57□□□□□ -0.88
SCDP1-201ENST00000455244 ZNF541Q9H0D2 1346 aa9.56□□□□□ -0.88
SCDP1-201ENST00000455244 UNCXA6NJT0 531 aa9.56□□□□□ -0.88
SCDP1-201ENST00000455244 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
SCDP1-201ENST00000455244 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCDP1-201ENST00000455244 HDGFL1Q5TGJ6 251 aa9.56□□□□□ -0.88
SCDP1-201ENST00000455244 STYK1Q6J9G0 422 aa9.56□□□□□ -0.88
SCDP1-201ENST00000455244 THUMPD2Q9BTF0 503 aaKnown RBP9.56□□□□□ -0.88
SCDP1-201ENST00000455244 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
SCDP1-201ENST00000455244 KLRG2A4D1S0 409 aaPredicted RBP9.55□□□□□ -0.88
SCDP1-201ENST00000455244 OATP04181 439 aa9.55□□□□□ -0.88
SCDP1-201ENST00000455244 ERCC3P19447 782 aa9.55□□□□□ -0.88
SCDP1-201ENST00000455244 NBPF5PQ86XG9 351 aaPredicted RBP9.55□□□□□ -0.88
SCDP1-201ENST00000455244 MICALL2Q8IY33 904 aa9.55□□□□□ -0.88
SCDP1-201ENST00000455244 FAM177A1Q8N128 213 aaPredicted RBP9.55□□□□□ -0.88
SCDP1-201ENST00000455244 NGEFQ8N5V2 710 aa9.55□□□□□ -0.88
SCDP1-201ENST00000455244 CNKSR1Q969H4 720 aa9.55□□□□□ -0.88
SCDP1-201ENST00000455244 MASTLQ96GX5 879 aa9.55□□□□□ -0.88
SCDP1-201ENST00000455244 NPDC1Q9NQX5 325 aaPredicted RBP9.55□□□□□ -0.88
SCDP1-201ENST00000455244 LTBP3Q9NS15 1303 aa9.55□□□□□ -0.88
SCDP1-201ENST00000455244 ABCC12Q96J65 1359 aa9.54□□□□□ -0.88
SCDP1-201ENST00000455244 SNRPA1P09661 255 aaKnown RBP9.54□□□□□ -0.88
SCDP1-201ENST00000455244 RFX1P22670 979 aa9.54□□□□□ -0.88
SCDP1-201ENST00000455244 ST5P78524 1137 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms