RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 RBM17Q96I25 401 aaKnown RBP14.45□□□□□ -0.1
HDAC9-217ENST00000455069 NMRK2Q9NPI5 230 aa14.45□□□□□ -0.1
HDAC9-217ENST00000455069 DUOX1Q9NRD9 1551 aa14.45□□□□□ -0.1
HDAC9-217ENST00000455069 COL4A5P29400 1685 aa14.45□□□□□ -0.1
HDAC9-217ENST00000455069 PPEF1O14829 653 aaPredicted RBP14.44□□□□□ -0.1
HDAC9-217ENST00000455069 TOMM70O94826 608 aa14.44□□□□□ -0.1
HDAC9-217ENST00000455069 LMNB1P20700 586 aa14.44□□□□□ -0.1
HDAC9-217ENST00000455069 NEXNQ0ZGT2 675 aa14.44□□□□□ -0.1
HDAC9-217ENST00000455069 SF3B3Q15393 1217 aaKnown RBP14.44□□□□□ -0.1
HDAC9-217ENST00000455069 SOGA3Q5TF21 947 aa14.44□□□□□ -0.1
HDAC9-217ENST00000455069 BCL2L13Q9BXK5 485 aa14.44□□□□□ -0.1
HDAC9-217ENST00000455069 TAOK3Q9H2K8 898 aa14.44□□□□□ -0.1
HDAC9-217ENST00000455069 CDHR2Q9BYE9 1310 aa14.43□□□□□ -0.1
HDAC9-217ENST00000455069 GCKRQ14397 625 aa14.43□□□□□ -0.1
HDAC9-217ENST00000455069 CASP7P55210 303 aa14.42□□□□□ -0.1
HDAC9-217ENST00000455069 FKBP4Q02790 459 aaKnown RBP eCLIP14.42□□□□□ -0.1
HDAC9-217ENST00000455069 BEND3Q5T5X7 828 aa14.42□□□□□ -0.1
HDAC9-217ENST00000455069 LINS1Q8NG48 757 aa14.42□□□□□ -0.1
HDAC9-217ENST00000455069 H7C1W4 665 aa14.41□□□□□ -0.1
HDAC9-217ENST00000455069 GRAPQ13588 217 aa14.41□□□□□ -0.1
HDAC9-217ENST00000455069 DDX46Q7L014 1031 aaKnown RBP14.41□□□□□ -0.1
HDAC9-217ENST00000455069 UBE3BQ7Z3V4 1068 aa14.41□□□□□ -0.1
HDAC9-217ENST00000455069 GRAPLQ8TC17 118 aaPredicted RBP14.41□□□□□ -0.1
HDAC9-217ENST00000455069 CELF1Q92879 486 aaKnown RBP14.41□□□□□ -0.1
HDAC9-217ENST00000455069 A0A1B0GUL6 1792 aa14.41□□□□□ -0.1
HDAC9-217ENST00000455069 PDE8AO60658 829 aa14.4□□□□□ -0.1
HDAC9-217ENST00000455069 ALDH1L2Q3SY69 923 aa14.4□□□□□ -0.1
HDAC9-217ENST00000455069 RTKN2Q8IZC4 609 aa14.4□□□□□ -0.1
HDAC9-217ENST00000455069 SEC31BQ9NQW1 1179 aa14.4□□□□□ -0.1
HDAC9-217ENST00000455069 ZNF277Q9NRM2 450 aaPredicted RBP14.4□□□□□ -0.1
HDAC9-217ENST00000455069 ATP6V0A2Q9Y487 856 aa14.4□□□□□ -0.1
HDAC9-217ENST00000455069 WDR90Q96KV7 1748 aa14.4□□□□□ -0.1
HDAC9-217ENST00000455069 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
HDAC9-217ENST00000455069 KDM2BQ8NHM5 1336 aa14.4□□□□□ -0.1
HDAC9-217ENST00000455069 ZC3H4Q9UPT8 1303 aaKnown RBP14.4□□□□□ -0.1
HDAC9-217ENST00000455069 CT47B1P0C2W7 299 aaPredicted RBP14.39□□□□□ -0.11
HDAC9-217ENST00000455069 CTSWP56202 376 aa14.39□□□□□ -0.11
HDAC9-217ENST00000455069 CC2D2BQ6DHV5 1058 aa14.39□□□□□ -0.11
HDAC9-217ENST00000455069 RBM46Q8TBY0 533 aaKnown RBP14.39□□□□□ -0.11
HDAC9-217ENST00000455069 CCDC85AQ96PX6 553 aaPredicted RBP14.39□□□□□ -0.11
HDAC9-217ENST00000455069 PSMD1Q99460 953 aa14.39□□□□□ -0.11
HDAC9-217ENST00000455069 BBOX1O75936 387 aa14.38□□□□□ -0.11
HDAC9-217ENST00000455069 APLP1P51693 650 aa14.38□□□□□ -0.11
HDAC9-217ENST00000455069 SMC4Q9NTJ3 1288 aa14.38□□□□□ -0.11
HDAC9-217ENST00000455069 PTPRCP08575 1304 aa14.38□□□□□ -0.11
HDAC9-217ENST00000455069 IARSP41252 1262 aaKnown RBP14.37□□□□□ -0.11
HDAC9-217ENST00000455069 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
HDAC9-217ENST00000455069 SLC4A10Q6U841 1118 aa14.37□□□□□ -0.11
HDAC9-217ENST00000455069 SP8Q8IXZ3 490 aa14.37□□□□□ -0.11
HDAC9-217ENST00000455069 TTLL11Q8NHH1 800 aa14.37□□□□□ -0.11
HDAC9-217ENST00000455069 PLA2G12BQ9BX93 195 aa14.37□□□□□ -0.11
HDAC9-217ENST00000455069 RTL9Q8NET4 1388 aa14.36□□□□□ -0.11
HDAC9-217ENST00000455069 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
HDAC9-217ENST00000455069 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
HDAC9-217ENST00000455069 CCDC152Q4G0S7 254 aa14.36□□□□□ -0.11
HDAC9-217ENST00000455069 RTFDC1Q9BY42 306 aaPredicted RBP14.36□□□□□ -0.11
HDAC9-217ENST00000455069 GREM2Q9H772 168 aa14.36□□□□□ -0.11
HDAC9-217ENST00000455069 RRAGCQ9HB90 399 aa14.36□□□□□ -0.11
HDAC9-217ENST00000455069 GLTPD2A6NH11 291 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 GRM8O00222 908 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 ALDH1L1O75891 902 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 RPS8P62241 208 aaKnown RBP14.35□□□□□ -0.11
HDAC9-217ENST00000455069 GRIPAP1Q4V328 841 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 EPHA10Q5JZY3 1008 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 TMC4Q7Z404 712 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 C16orf71Q8IYS4 520 aaPredicted RBP14.35□□□□□ -0.11
HDAC9-217ENST00000455069 DNAJC5GQ8N7S2 189 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 SRCIN1Q9C0H9 1055 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 ZNF541Q9H0D2 1346 aa14.35□□□□□ -0.11
HDAC9-217ENST00000455069 FOXO4P98177 505 aa14.34□□□□□ -0.11
HDAC9-217ENST00000455069 FSTL1Q12841 308 aa14.34□□□□□ -0.11
HDAC9-217ENST00000455069 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
HDAC9-217ENST00000455069 MPNDQ8N594 471 aa14.34□□□□□ -0.11
HDAC9-217ENST00000455069 NOB1Q9ULX3 412 aaKnown RBP14.34□□□□□ -0.11
HDAC9-217ENST00000455069 SCN9AQ15858 1988 aa14.33□□□□□ -0.12
HDAC9-217ENST00000455069 CSF1RP07333 972 aa14.33□□□□□ -0.12
HDAC9-217ENST00000455069 NBPF7P0C2Y1 421 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-217ENST00000455069 GPSM2P81274 684 aa14.33□□□□□ -0.12
HDAC9-217ENST00000455069 AOC3Q16853 763 aa14.33□□□□□ -0.12
HDAC9-217ENST00000455069 DPP8Q6V1X1 898 aaPredicted RBP14.33□□□□□ -0.12
HDAC9-217ENST00000455069 KAZALD1Q96I82 304 aa14.33□□□□□ -0.12
HDAC9-217ENST00000455069 SCN4AP35499 1836 aa14.33□□□□□ -0.12
HDAC9-217ENST00000455069 UTYO14607 1347 aa14.33□□□□□ -0.12
HDAC9-217ENST00000455069 ZNF646O15015 1829 aaPredicted RBP14.32□□□□□ -0.12
HDAC9-217ENST00000455069 PSME4Q14997 1843 aa14.32□□□□□ -0.12
HDAC9-217ENST00000455069 POTECB2RU33 542 aa14.32□□□□□ -0.12
HDAC9-217ENST00000455069 FZD9O00144 591 aa14.32□□□□□ -0.12
HDAC9-217ENST00000455069 BCAR3O75815 825 aa14.32□□□□□ -0.12
HDAC9-217ENST00000455069 DDNO94850 711 aaPredicted RBP14.32□□□□□ -0.12
HDAC9-217ENST00000455069 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
HDAC9-217ENST00000455069 POLLQ9UGP5 575 aa14.32□□□□□ -0.12
HDAC9-217ENST00000455069 PPIP5K2O43314 1243 aa14.31□□□□□ -0.12
HDAC9-217ENST00000455069 ITGA6P23229 1130 aa14.31□□□□□ -0.12
HDAC9-217ENST00000455069 IFFO2Q5TF58 517 aa14.31□□□□□ -0.12
HDAC9-217ENST00000455069 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
HDAC9-217ENST00000455069 LARGE2Q8N3Y3 721 aa14.31□□□□□ -0.12
HDAC9-217ENST00000455069 GPR101Q96P66 508 aaPredicted RBP14.31□□□□□ -0.12
HDAC9-217ENST00000455069 CDC5LQ99459 802 aaKnown RBP14.31□□□□□ -0.12
HDAC9-217ENST00000455069 TMX4Q9H1E5 349 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms