RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
ATXN3-205ENST00000454964 CAPN15O75808 1086 aa11.9□□□□□ -0.5
ATXN3-205ENST00000454964 DALRD3Q5D0E6 543 aaKnown RBP11.9□□□□□ -0.5
ATXN3-205ENST00000454964 UBE3BQ7Z3V4 1068 aa11.9□□□□□ -0.5
ATXN3-205ENST00000454964 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
ATXN3-205ENST00000454964 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
ATXN3-205ENST00000454964 ZNF622Q969S3 477 aaKnown RBP eCLIP11.89□□□□□ -0.51
ATXN3-205ENST00000454964 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
ATXN3-205ENST00000454964 LAMB2P55268 1798 aa11.88□□□□□ -0.51
ATXN3-205ENST00000454964 GNAI2P04899 355 aa11.88□□□□□ -0.51
ATXN3-205ENST00000454964 CSF1RP07333 972 aa11.88□□□□□ -0.51
ATXN3-205ENST00000454964 CCDC57Q2TAC2 916 aa11.88□□□□□ -0.51
ATXN3-205ENST00000454964 RTKN2Q8IZC4 609 aa11.88□□□□□ -0.51
ATXN3-205ENST00000454964 VPS33BQ9H267 617 aa11.88□□□□□ -0.51
ATXN3-205ENST00000454964 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
ATXN3-205ENST00000454964 RTL9Q8NET4 1388 aa11.88□□□□□ -0.51
ATXN3-205ENST00000454964 A0A0G2JLW4 131 aa11.87□□□□□ -0.51
ATXN3-205ENST00000454964 DPEP1P16444 411 aa11.87□□□□□ -0.51
ATXN3-205ENST00000454964 CTSWP56202 376 aa11.87□□□□□ -0.51
ATXN3-205ENST00000454964 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
ATXN3-205ENST00000454964 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
ATXN3-205ENST00000454964 MVPQ14764 893 aaKnown RBP11.87□□□□□ -0.51
ATXN3-205ENST00000454964 ITPRIPQ8IWB1 547 aa11.87□□□□□ -0.51
ATXN3-205ENST00000454964 TTLL11Q8NHH1 800 aa11.87□□□□□ -0.51
ATXN3-205ENST00000454964 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
ATXN3-205ENST00000454964 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
ATXN3-205ENST00000454964 ANKRD31Q8N7Z5 1873 aa11.87□□□□□ -0.51
ATXN3-205ENST00000454964 ANKRD18BA2A2Z9 1011 aa11.86□□□□□ -0.51
ATXN3-205ENST00000454964 HCLS1P14317 486 aaPredicted RBP11.86□□□□□ -0.51
ATXN3-205ENST00000454964 IGHMBP2P38935 993 aaKnown RBP11.86□□□□□ -0.51
ATXN3-205ENST00000454964 CASP7P55210 303 aa11.86□□□□□ -0.51
ATXN3-205ENST00000454964 RRP1P56182 461 aaKnown RBP11.86□□□□□ -0.51
ATXN3-205ENST00000454964 RPS8P62241 208 aaKnown RBP11.86□□□□□ -0.51
ATXN3-205ENST00000454964 GRAPQ13588 217 aa11.86□□□□□ -0.51
ATXN3-205ENST00000454964 GPR162Q16538 588 aa11.86□□□□□ -0.51
ATXN3-205ENST00000454964 ANKRD18AQ8IVF6 992 aa11.86□□□□□ -0.51
ATXN3-205ENST00000454964 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
ATXN3-205ENST00000454964 GRAPLQ8TC17 118 aaPredicted RBP11.86□□□□□ -0.51
ATXN3-205ENST00000454964 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
ATXN3-205ENST00000454964 NBPF7P0C2Y1 421 aaPredicted RBP11.85□□□□□ -0.51
ATXN3-205ENST00000454964 RABL6Q3YEC7 729 aaPredicted RBP11.85□□□□□ -0.51
ATXN3-205ENST00000454964 TAF7LQ5H9L4 462 aa11.85□□□□□ -0.51
ATXN3-205ENST00000454964 RPAP2Q8IXW5 612 aaPredicted RBP11.85□□□□□ -0.51
ATXN3-205ENST00000454964 SP8Q8IXZ3 490 aa11.85□□□□□ -0.51
ATXN3-205ENST00000454964 TMEM57Q8N5G2 664 aa11.85□□□□□ -0.51
ATXN3-205ENST00000454964 MPHOSPH8Q99549 860 aa11.85□□□□□ -0.51
ATXN3-205ENST00000454964 DDX60Q8IY21 1712 aaKnown RBP11.85□□□□□ -0.51
ATXN3-205ENST00000454964 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
ATXN3-205ENST00000454964 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
ATXN3-205ENST00000454964 HMMRO75330 724 aa11.84□□□□□ -0.51
ATXN3-205ENST00000454964 KCNA3P22001 575 aa11.84□□□□□ -0.51
ATXN3-205ENST00000454964 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
ATXN3-205ENST00000454964 ANKRD2Q9GZV1 360 aa11.84□□□□□ -0.51
ATXN3-205ENST00000454964 BSDC1Q9NW68 430 aaPredicted RBP11.84□□□□□ -0.51
ATXN3-205ENST00000454964 FOXO4P98177 505 aa11.83□□□□□ -0.52
ATXN3-205ENST00000454964 MTX1Q13505 466 aa11.83□□□□□ -0.52
ATXN3-205ENST00000454964 CCDC93Q567U6 631 aa11.83□□□□□ -0.52
ATXN3-205ENST00000454964 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
ATXN3-205ENST00000454964 LMBR1LQ6UX01 489 aa11.83□□□□□ -0.52
ATXN3-205ENST00000454964 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
ATXN3-205ENST00000454964 ATP6V0A2Q9Y487 856 aa11.83□□□□□ -0.52
ATXN3-205ENST00000454964 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
ATXN3-205ENST00000454964 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
ATXN3-205ENST00000454964 ITGA6P23229 1130 aa11.82□□□□□ -0.52
ATXN3-205ENST00000454964 CHRNA5P30532 468 aa11.82□□□□□ -0.52
ATXN3-205ENST00000454964 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
ATXN3-205ENST00000454964 CHMP3Q9Y3E7 222 aa11.82□□□□□ -0.52
ATXN3-205ENST00000454964 LDHAL6AQ6ZMR3 332 aa11.81□□□□□ -0.52
ATXN3-205ENST00000454964 SYNE4Q8N205 404 aa11.81□□□□□ -0.52
ATXN3-205ENST00000454964 CCDC24Q8N4L8 307 aa11.81□□□□□ -0.52
ATXN3-205ENST00000454964 NLGN2Q8NFZ4 835 aa11.81□□□□□ -0.52
ATXN3-205ENST00000454964 PANK1Q8TE04 598 aa11.81□□□□□ -0.52
ATXN3-205ENST00000454964 BICC1Q9H694 974 aaKnown RBP11.81□□□□□ -0.52
ATXN3-205ENST00000454964 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
ATXN3-205ENST00000454964 CHD4Q14839 1912 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 PLIN1O60240 522 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 ATP8B2P98198 1209 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 MPNDQ8N594 471 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 SUCLG2Q96I99 432 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 PSMD1Q99460 953 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 EYA3Q99504 573 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 MEIS3Q99687 375 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 GREM2Q9H772 168 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 LEMD3Q9Y2U8 911 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 COG6Q9Y2V7 657 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 SUPT16HQ9Y5B9 1047 aaKnown RBP11.8□□□□□ -0.52
ATXN3-205ENST00000454964 LRRFIP2Q9Y608 721 aaKnown RBP11.8□□□□□ -0.52
ATXN3-205ENST00000454964 MROH5Q6ZUA9 1318 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 LTBP3Q9NS15 1303 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
ATXN3-205ENST00000454964 SLX4Q8IY92 1834 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 SRGAP3O43295 1099 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 CIAO1O76071 339 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 NEFLP07196 543 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 RLBP1P12271 317 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 ATP2B4P23634 1241 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 ARHGAP27Q6ZUM4 889 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 PELP1Q8IZL8 1130 aaKnown RBP11.79□□□□□ -0.52
ATXN3-205ENST00000454964 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms