RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PDE8AO60658 829 aa18.03■□□□□ 0.48
HDAC4-205ENST00000454542 GRAPQ13588 217 aa18.03■□□□□ 0.48
HDAC4-205ENST00000454542 RTL5Q5HYW3 569 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-205ENST00000454542 CC2D2BQ6DHV5 1058 aa18.03■□□□□ 0.48
HDAC4-205ENST00000454542 SLC51AQ86UW1 340 aa18.03■□□□□ 0.48
HDAC4-205ENST00000454542 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-205ENST00000454542 TAOK3Q9H2K8 898 aa18.03■□□□□ 0.48
HDAC4-205ENST00000454542 LMNB1P20700 586 aa18.02■□□□□ 0.48
HDAC4-205ENST00000454542 C9orf131Q5VYM1 1079 aa18.02■□□□□ 0.48
HDAC4-205ENST00000454542 OLFM4Q6UX06 510 aa18.02■□□□□ 0.48
HDAC4-205ENST00000454542 ZNF784Q8NCA9 323 aaPredicted RBP18.02■□□□□ 0.48
HDAC4-205ENST00000454542 ZNF219Q9P2Y4 722 aaPredicted RBP18.02■□□□□ 0.48
HDAC4-205ENST00000454542 ALDH1L1O75891 902 aa18.01■□□□□ 0.47
HDAC4-205ENST00000454542 CTSWP56202 376 aa18.01■□□□□ 0.47
HDAC4-205ENST00000454542 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
HDAC4-205ENST00000454542 DDX46Q7L014 1031 aaKnown RBP18.01■□□□□ 0.47
HDAC4-205ENST00000454542 UBE3BQ7Z3V4 1068 aa18.01■□□□□ 0.47
HDAC4-205ENST00000454542 ATP6V0A2Q9Y487 856 aa18.01■□□□□ 0.47
HDAC4-205ENST00000454542 KIF16BQ96L93 1317 aa18■□□□□ 0.47
HDAC4-205ENST00000454542 COL4A5P29400 1685 aa18■□□□□ 0.47
HDAC4-205ENST00000454542 GRIPAP1Q4V328 841 aa18■□□□□ 0.47
HDAC4-205ENST00000454542 TMC4Q7Z404 712 aa18■□□□□ 0.47
HDAC4-205ENST00000454542 RTKN2Q8IZC4 609 aa18■□□□□ 0.47
HDAC4-205ENST00000454542 JARID2Q92833 1246 aaPredicted RBP18■□□□□ 0.47
HDAC4-205ENST00000454542 PSMD1Q99460 953 aa18■□□□□ 0.47
HDAC4-205ENST00000454542 RNF181Q9P0P0 153 aa18■□□□□ 0.47
HDAC4-205ENST00000454542 UTYO14607 1347 aa17.99■□□□□ 0.47
HDAC4-205ENST00000454542 BBOX1O75936 387 aa17.99■□□□□ 0.47
HDAC4-205ENST00000454542 CCDC152Q4G0S7 254 aa17.99■□□□□ 0.47
HDAC4-205ENST00000454542 CELF1Q92879 486 aaKnown RBP17.99■□□□□ 0.47
HDAC4-205ENST00000454542 SRCIN1Q9C0H9 1055 aa17.99■□□□□ 0.47
HDAC4-205ENST00000454542 SPEF2Q9C093 1822 aa17.99■□□□□ 0.47
HDAC4-205ENST00000454542 A0A1B0GUL6 1792 aa17.99■□□□□ 0.47
HDAC4-205ENST00000454542 GRM8O00222 908 aa17.98■□□□□ 0.47
HDAC4-205ENST00000454542 SP8Q8IXZ3 490 aa17.97■□□□□ 0.47
HDAC4-205ENST00000454542 TTLL11Q8NHH1 800 aa17.97■□□□□ 0.47
HDAC4-205ENST00000454542 CSF1RP07333 972 aa17.96■□□□□ 0.47
HDAC4-205ENST00000454542 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
HDAC4-205ENST00000454542 ARHGAP45Q92619 1136 aa17.96■□□□□ 0.47
HDAC4-205ENST00000454542 RTFDC1Q9BY42 306 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-205ENST00000454542 SEC31BQ9NQW1 1179 aa17.96■□□□□ 0.47
HDAC4-205ENST00000454542 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
HDAC4-205ENST00000454542 API5Q9BZZ5 524 aaKnown RBP17.95■□□□□ 0.46
HDAC4-205ENST00000454542 GREM2Q9H772 168 aa17.95■□□□□ 0.46
HDAC4-205ENST00000454542 NOB1Q9ULX3 412 aaKnown RBP17.95■□□□□ 0.46
HDAC4-205ENST00000454542 FOXO4P98177 505 aa17.94■□□□□ 0.46
HDAC4-205ENST00000454542 IARSP41252 1262 aaKnown RBP17.93■□□□□ 0.46
HDAC4-205ENST00000454542 RPS8P62241 208 aaKnown RBP17.93■□□□□ 0.46
HDAC4-205ENST00000454542 FAM161AQ3B820 660 aa17.93■□□□□ 0.46
HDAC4-205ENST00000454542 KAZALD1Q96I82 304 aa17.93■□□□□ 0.46
HDAC4-205ENST00000454542 ZNF277Q9NRM2 450 aaPredicted RBP17.93■□□□□ 0.46
HDAC4-205ENST00000454542 BCAR3O75815 825 aa17.92■□□□□ 0.46
HDAC4-205ENST00000454542 EPHA10Q5JZY3 1008 aa17.92■□□□□ 0.46
HDAC4-205ENST00000454542 CCDC85AQ96PX6 553 aaPredicted RBP17.92■□□□□ 0.46
HDAC4-205ENST00000454542 CDC5LQ99459 802 aaKnown RBP17.92■□□□□ 0.46
HDAC4-205ENST00000454542 NBPF7P0C2Y1 421 aaPredicted RBP17.91■□□□□ 0.46
HDAC4-205ENST00000454542 TRIM27P14373 513 aa17.91■□□□□ 0.46
HDAC4-205ENST00000454542 CCT4P50991 539 aaKnown RBP17.91■□□□□ 0.46
HDAC4-205ENST00000454542 SUCLG2Q96I99 432 aa17.91■□□□□ 0.46
HDAC4-205ENST00000454542 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
HDAC4-205ENST00000454542 PODXL2Q9NZ53 605 aa17.91■□□□□ 0.46
HDAC4-205ENST00000454542 C9orf78Q9NZ63 289 aaPredicted RBP17.91■□□□□ 0.46
HDAC4-205ENST00000454542 RABL6Q3YEC7 729 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-205ENST00000454542 DPP8Q6V1X1 898 aaPredicted RBP17.9■□□□□ 0.46
HDAC4-205ENST00000454542 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
HDAC4-205ENST00000454542 MPNDQ8N594 471 aa17.9■□□□□ 0.46
HDAC4-205ENST00000454542 USP44Q9H0E7 712 aa17.9■□□□□ 0.46
HDAC4-205ENST00000454542 ITGA6P23229 1130 aa17.89■□□□□ 0.45
HDAC4-205ENST00000454542 INTS3Q68E01 1043 aaKnown RBP17.89■□□□□ 0.45
HDAC4-205ENST00000454542 ATF7IPQ6VMQ6 1270 aa17.89■□□□□ 0.45
HDAC4-205ENST00000454542 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
HDAC4-205ENST00000454542 TMX4Q9H1E5 349 aaPredicted RBP17.89■□□□□ 0.45
HDAC4-205ENST00000454542 GPBP1L1Q9HC44 474 aaPredicted RBP17.89■□□□□ 0.45
HDAC4-205ENST00000454542 GLTPD2A6NH11 291 aa17.88■□□□□ 0.45
HDAC4-205ENST00000454542 FZD9O00144 591 aa17.88■□□□□ 0.45
HDAC4-205ENST00000454542 GPSM2P81274 684 aa17.88■□□□□ 0.45
HDAC4-205ENST00000454542 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
HDAC4-205ENST00000454542 BSDC1Q9NW68 430 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-205ENST00000454542 KDM2BQ8NHM5 1336 aa17.88■□□□□ 0.45
HDAC4-205ENST00000454542 PSME4Q14997 1843 aa17.87■□□□□ 0.45
HDAC4-205ENST00000454542 KIF3CO14782 793 aa17.87■□□□□ 0.45
HDAC4-205ENST00000454542 IPO8O15397 1037 aaKnown RBP17.87■□□□□ 0.45
HDAC4-205ENST00000454542 LMBR1LQ6UX01 489 aa17.87■□□□□ 0.45
HDAC4-205ENST00000454542 ANKRD44Q8N8A2 993 aa17.87■□□□□ 0.45
HDAC4-205ENST00000454542 TNNQ9UQP3 1299 aa17.87■□□□□ 0.45
HDAC4-205ENST00000454542 ZNF541Q9H0D2 1346 aa17.87■□□□□ 0.45
HDAC4-205ENST00000454542 ZNF646O15015 1829 aaPredicted RBP17.86■□□□□ 0.45
HDAC4-205ENST00000454542 SCN4AP35499 1836 aa17.86■□□□□ 0.45
HDAC4-205ENST00000454542 PPIP5K2O43314 1243 aa17.86■□□□□ 0.45
HDAC4-205ENST00000454542 AOC3Q16853 763 aa17.86■□□□□ 0.45
HDAC4-205ENST00000454542 ZNF526Q8TF50 670 aaPredicted RBP17.86■□□□□ 0.45
HDAC4-205ENST00000454542 BICC1Q9H694 974 aaKnown RBP17.86■□□□□ 0.45
HDAC4-205ENST00000454542 POLLQ9UGP5 575 aa17.86■□□□□ 0.45
HDAC4-205ENST00000454542 XDHP47989 1333 aa17.86■□□□□ 0.45
HDAC4-205ENST00000454542 ANKRD18BA2A2Z9 1011 aa17.85■□□□□ 0.45
HDAC4-205ENST00000454542 IGHMBP2P38935 993 aaKnown RBP17.85■□□□□ 0.45
HDAC4-205ENST00000454542 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
HDAC4-205ENST00000454542 LARGE2Q8N3Y3 721 aa17.85■□□□□ 0.45
HDAC4-205ENST00000454542 TBC1D16Q8TBP0 767 aa17.85■□□□□ 0.45
HDAC4-205ENST00000454542 NMRK2Q9NPI5 230 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms