RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
LMCD1-205ENST00000454244 POTEIP0CG38 1075 aa13.83□□□□□ -0.2
LMCD1-205ENST00000454244 POTEJP0CG39 1038 aa13.83□□□□□ -0.2
LMCD1-205ENST00000454244 AOC3Q16853 763 aa13.83□□□□□ -0.2
LMCD1-205ENST00000454244 G2E3Q7L622 706 aa13.83□□□□□ -0.2
LMCD1-205ENST00000454244 NIM1KQ8IY84 436 aa13.83□□□□□ -0.2
LMCD1-205ENST00000454244 PI4KAP1Q8N8J0 262 aa13.83□□□□□ -0.2
LMCD1-205ENST00000454244 SUPT20HQ8NEM7 779 aa13.83□□□□□ -0.2
LMCD1-205ENST00000454244 JARID2Q92833 1246 aaPredicted RBP13.83□□□□□ -0.2
LMCD1-205ENST00000454244 CELF1Q92879 486 aaKnown RBP13.83□□□□□ -0.2
LMCD1-205ENST00000454244 RTFDC1Q9BY42 306 aaPredicted RBP13.83□□□□□ -0.2
LMCD1-205ENST00000454244 TAF1DQ9H5J8 278 aaPredicted RBP13.83□□□□□ -0.2
LMCD1-205ENST00000454244 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.2
LMCD1-205ENST00000454244 COL4A5P29400 1685 aa13.82□□□□□ -0.2
LMCD1-205ENST00000454244 PCCAP05165 728 aaPredicted RBP13.82□□□□□ -0.2
LMCD1-205ENST00000454244 EXOSC9Q06265 439 aaKnown RBP13.82□□□□□ -0.2
LMCD1-205ENST00000454244 TMC4Q7Z404 712 aa13.82□□□□□ -0.2
LMCD1-205ENST00000454244 GPC2Q8N158 579 aa13.82□□□□□ -0.2
LMCD1-205ENST00000454244 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
LMCD1-205ENST00000454244 HACL1Q9UJ83 578 aa13.82□□□□□ -0.2
LMCD1-205ENST00000454244 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
LMCD1-205ENST00000454244 VAMP4O75379 141 aa13.81□□□□□ -0.2
LMCD1-205ENST00000454244 IGKV5-2P06315 115 aa13.81□□□□□ -0.2
LMCD1-205ENST00000454244 HSP90B1P14625 803 aaKnown RBP13.81□□□□□ -0.2
LMCD1-205ENST00000454244 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
LMCD1-205ENST00000454244 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
LMCD1-205ENST00000454244 DNAJC5GQ8N7S2 189 aa13.81□□□□□ -0.2
LMCD1-205ENST00000454244 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
LMCD1-205ENST00000454244 PDE8AO60658 829 aa13.8□□□□□ -0.2
LMCD1-205ENST00000454244 EPHX2P34913 555 aa13.8□□□□□ -0.2
LMCD1-205ENST00000454244 FLIIQ13045 1269 aa13.8□□□□□ -0.2
LMCD1-205ENST00000454244 EAPPQ56P03 285 aaPredicted RBP13.8□□□□□ -0.2
LMCD1-205ENST00000454244 LDHDQ86WU2 507 aa13.8□□□□□ -0.2
LMCD1-205ENST00000454244 MYH16Q9H6N6 1097 aa13.8□□□□□ -0.2
LMCD1-205ENST00000454244 SEC31BQ9NQW1 1179 aa13.8□□□□□ -0.2
LMCD1-205ENST00000454244 LAMB2P55268 1798 aa13.79□□□□□ -0.2
LMCD1-205ENST00000454244 RPS8P62241 208 aaKnown RBP13.79□□□□□ -0.2
LMCD1-205ENST00000454244 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
LMCD1-205ENST00000454244 CWF19L2Q2TBE0 894 aaKnown RBP13.79□□□□□ -0.2
LMCD1-205ENST00000454244 CCDC85AQ96PX6 553 aaPredicted RBP13.79□□□□□ -0.2
LMCD1-205ENST00000454244 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
LMCD1-205ENST00000454244 NSFL1CQ9UNZ2 370 aaKnown RBP13.79□□□□□ -0.2
LMCD1-205ENST00000454244 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
LMCD1-205ENST00000454244 NEURL1BA8MQ27 555 aa13.78□□□□□ -0.2
LMCD1-205ENST00000454244 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
LMCD1-205ENST00000454244 GPSM2P81274 684 aa13.78□□□□□ -0.2
LMCD1-205ENST00000454244 FKBP5Q13451 457 aaPredicted RBP13.78□□□□□ -0.2
LMCD1-205ENST00000454244 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
LMCD1-205ENST00000454244 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
LMCD1-205ENST00000454244 CDHR2Q9BYE9 1310 aa13.78□□□□□ -0.2
LMCD1-205ENST00000454244 C6orf229H3BNL8 230 aa13.77□□□□□ -0.21
LMCD1-205ENST00000454244 SCNN1DP51172 638 aa13.77□□□□□ -0.21
LMCD1-205ENST00000454244 CXCL9Q07325 125 aa13.77□□□□□ -0.21
LMCD1-205ENST00000454244 PNMA8AQ86V59 439 aaPredicted RBP13.77□□□□□ -0.21
LMCD1-205ENST00000454244 DNAAF4Q8WXU2 420 aa13.77□□□□□ -0.21
LMCD1-205ENST00000454244 KLRG1Q96E93 195 aa13.77□□□□□ -0.21
LMCD1-205ENST00000454244 COL4A1P02462 1669 aa13.76□□□□□ -0.21
LMCD1-205ENST00000454244 EPS15P42566 896 aa13.76□□□□□ -0.21
LMCD1-205ENST00000454244 CTSWP56202 376 aa13.76□□□□□ -0.21
LMCD1-205ENST00000454244 POLLQ9UGP5 575 aa13.76□□□□□ -0.21
LMCD1-205ENST00000454244 ZNF521Q96K83 1311 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 H7C1W4 665 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 RIMBP2O15034 1052 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 RAD17O75943 681 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 GCKRQ14397 625 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 WASHC4Q2M389 1173 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 CIAPIN1Q6FI81 312 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 UBE3BQ7Z3V4 1068 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 GPR101Q96P66 508 aaPredicted RBP13.75□□□□□ -0.21
LMCD1-205ENST00000454244 DUOX1Q9NRD9 1551 aa13.75□□□□□ -0.21
LMCD1-205ENST00000454244 TAF1P21675 1872 aa13.74□□□□□ -0.21
LMCD1-205ENST00000454244 SCN4AP35499 1836 aa13.74□□□□□ -0.21
LMCD1-205ENST00000454244 YDJCA8MPS7 323 aa13.74□□□□□ -0.21
LMCD1-205ENST00000454244 GMPSP49915 693 aaPredicted RBP13.74□□□□□ -0.21
LMCD1-205ENST00000454244 TNIP1Q15025 636 aa13.74□□□□□ -0.21
LMCD1-205ENST00000454244 MAP1SQ66K74 1059 aaPredicted RBP13.74□□□□□ -0.21
LMCD1-205ENST00000454244 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
LMCD1-205ENST00000454244 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
LMCD1-205ENST00000454244 TBC1D16Q8TBP0 767 aa13.74□□□□□ -0.21
LMCD1-205ENST00000454244 EYA3Q99504 573 aa13.74□□□□□ -0.21
LMCD1-205ENST00000454244 PASKQ96RG2 1323 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 F6X3S4 739 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 UFL1O94874 794 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 ITGBL1O95965 494 aaPredicted RBP13.73□□□□□ -0.21
LMCD1-205ENST00000454244 CNTROBQ8N137 903 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
LMCD1-205ENST00000454244 BCL2L13Q9BXK5 485 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 GREM2Q9H772 168 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 DBNDD1Q9H9R9 158 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 PODXL2Q9NZ53 605 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 GPRC5DQ9NZD1 345 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 ANKIB1Q9P2G1 1089 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 LRRC37AA6NMS7 1700 aa13.73□□□□□ -0.21
LMCD1-205ENST00000454244 CASP7P55210 303 aa13.72□□□□□ -0.21
LMCD1-205ENST00000454244 DOK7Q18PE1 504 aa13.72□□□□□ -0.21
LMCD1-205ENST00000454244 USP50Q70EL3 339 aaPredicted RBP13.72□□□□□ -0.21
LMCD1-205ENST00000454244 ZC3H12CQ9C0D7 883 aaKnown RBP13.72□□□□□ -0.21
LMCD1-205ENST00000454244 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
LMCD1-205ENST00000454244 GGA1Q9UJY5 639 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms