RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 DHX9Q08211 1270 aaKnown RBP10.02□□□□□ -0.81
LINC00299-204ENST00000454043 ORAI2Q96SN7 254 aa10.02□□□□□ -0.81
LINC00299-204ENST00000454043 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
LINC00299-204ENST00000454043 ZNF335Q9H4Z2 1342 aaPredicted RBP10.02□□□□□ -0.81
LINC00299-204ENST00000454043 MAPK8IP3Q9UPT6 1336 aa10.02□□□□□ -0.81
LINC00299-204ENST00000454043 SMG6Q86US8 1419 aaKnown RBP10.01□□□□□ -0.81
LINC00299-204ENST00000454043 ESPNB1AK53 854 aa10.01□□□□□ -0.81
LINC00299-204ENST00000454043 TERTO14746 1132 aaKnown RBP10.01□□□□□ -0.81
LINC00299-204ENST00000454043 FBXO45P0C2W1 286 aa10.01□□□□□ -0.81
LINC00299-204ENST00000454043 AMPHP49418 695 aa10.01□□□□□ -0.81
LINC00299-204ENST00000454043 Q6ZVU0 165 aa10.01□□□□□ -0.81
LINC00299-204ENST00000454043 SLAIN2Q9P270 581 aa10.01□□□□□ -0.81
LINC00299-204ENST00000454043 MST1RQ04912 1400 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 KIF1AQ12756 1690 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 CDK12Q9NYV4 1490 aaPredicted RBP10□□□□□ -0.81
LINC00299-204ENST00000454043 APAF1O14727 1248 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 GPR37L1O60883 481 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 WFS1O76024 890 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 RRS1Q15050 365 aaKnown RBP10□□□□□ -0.81
LINC00299-204ENST00000454043 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 CCDC146Q8IYE0 955 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 LRRC7Q96NW7 1537 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 NRKQ7Z2Y5 1582 aa10□□□□□ -0.81
LINC00299-204ENST00000454043 IL13P35225 146 aa9.99□□□□□ -0.81
LINC00299-204ENST00000454043 CBLBQ13191 982 aa9.99□□□□□ -0.81
LINC00299-204ENST00000454043 C6orf118Q5T5N4 469 aa9.99□□□□□ -0.81
LINC00299-204ENST00000454043 LINC00528Q8N1L1 170 aa9.99□□□□□ -0.81
LINC00299-204ENST00000454043 TSEN34Q9BSV6 310 aaKnown RBP9.99□□□□□ -0.81
LINC00299-204ENST00000454043 SBNO1A3KN83 1393 aa9.99□□□□□ -0.81
LINC00299-204ENST00000454043 FLT4P35916 1363 aa9.99□□□□□ -0.81
LINC00299-204ENST00000454043 RGPD8O14715 1765 aaPredicted RBP9.98□□□□□ -0.81
LINC00299-204ENST00000454043 UPP2O95045 317 aa9.98□□□□□ -0.81
LINC00299-204ENST00000454043 BMP2P12643 396 aa9.98□□□□□ -0.81
LINC00299-204ENST00000454043 CCDC27Q2M243 656 aa9.98□□□□□ -0.81
LINC00299-204ENST00000454043 TCP11L2Q8N4U5 519 aa9.98□□□□□ -0.81
LINC00299-204ENST00000454043 NXF1Q9UBU9 619 aaKnown RBP9.98□□□□□ -0.81
LINC00299-204ENST00000454043 GTF3C3Q9Y5Q9 886 aa9.98□□□□□ -0.81
LINC00299-204ENST00000454043 NDUFB9Q9Y6M9 179 aa9.98□□□□□ -0.81
LINC00299-204ENST00000454043 NR1H3Q13133 447 aa9.97□□□□□ -0.81
LINC00299-204ENST00000454043 WDR63Q8IWG1 891 aa9.97□□□□□ -0.81
LINC00299-204ENST00000454043 TMPRSS4Q9NRS4 437 aa9.97□□□□□ -0.81
LINC00299-204ENST00000454043 MAP3K19Q56UN5 1328 aa9.97□□□□□ -0.81
LINC00299-204ENST00000454043 RTL1A6NKG5 1358 aa9.97□□□□□ -0.81
LINC00299-204ENST00000454043 COL3A1P02461 1466 aaPredicted RBP9.97□□□□□ -0.81
LINC00299-204ENST00000454043 E9PSI1 815 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 ERVH48-1M5A8F1 160 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 APBB1O00213 710 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 GIGYF1O75420 1035 aaPredicted RBP9.96□□□□□ -0.82
LINC00299-204ENST00000454043 FBLN1P23142 703 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 CALD1Q05682 793 aaKnown RBP9.96□□□□□ -0.82
LINC00299-204ENST00000454043 LMOD3Q0VAK6 560 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 NUTM2GQ5VZR2 741 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 SEPT12Q8IYM1 358 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 PCDHB9Q9Y5E1 797 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 ARHGEF10O15013 1369 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 STRCP1A6NGW2 1772 aa9.96□□□□□ -0.82
LINC00299-204ENST00000454043 SOBPA7XYQ1 873 aa9.95□□□□□ -0.82
LINC00299-204ENST00000454043 GCP02774 474 aa9.95□□□□□ -0.82
LINC00299-204ENST00000454043 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
LINC00299-204ENST00000454043 EIF4A2Q14240 407 aaKnown RBP9.95□□□□□ -0.82
LINC00299-204ENST00000454043 BRINP3Q76B58 766 aa9.95□□□□□ -0.82
LINC00299-204ENST00000454043 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
LINC00299-204ENST00000454043 IP6K1Q92551 441 aa9.95□□□□□ -0.82
LINC00299-204ENST00000454043 PLEKHF1Q96S99 279 aa9.95□□□□□ -0.82
LINC00299-204ENST00000454043 SOS2Q07890 1332 aaPredicted RBP9.95□□□□□ -0.82
LINC00299-204ENST00000454043 MAP2P11137 1827 aaKnown RBP9.94□□□□□ -0.82
LINC00299-204ENST00000454043 ZNF521Q96K83 1311 aa9.94□□□□□ -0.82
LINC00299-204ENST00000454043 LILRA1O75019 489 aa9.94□□□□□ -0.82
LINC00299-204ENST00000454043 HOXC9P31274 260 aa9.94□□□□□ -0.82
LINC00299-204ENST00000454043 PRKAR2BP31323 418 aa9.94□□□□□ -0.82
LINC00299-204ENST00000454043 ADD1P35611 737 aaKnown RBP9.94□□□□□ -0.82
LINC00299-204ENST00000454043 TMPOP42166 694 aaKnown RBP9.94□□□□□ -0.82
LINC00299-204ENST00000454043 RAB15P59190 212 aa9.94□□□□□ -0.82
LINC00299-204ENST00000454043 XPCQ01831 940 aaPredicted RBP9.94□□□□□ -0.82
LINC00299-204ENST00000454043 HSP90AB2PQ58FF8 381 aa9.94□□□□□ -0.82
LINC00299-204ENST00000454043 LCE2CQ5TA81 110 aa9.94□□□□□ -0.82
LINC00299-204ENST00000454043 WWC1Q8IX03 1113 aa9.94□□□□□ -0.82
LINC00299-204ENST00000454043 PIK3C2AO00443 1686 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 SHPRHQ149N8 1683 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 USP19O94966 1318 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 SPATA31A3Q5VYP0 1347 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 RIPK4P57078 832 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 SLFN5Q08AF3 891 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 ERICH6BQ5W0A0 696 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 MYH16Q9H6N6 1097 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 SUPT16HQ9Y5B9 1047 aaKnown RBP9.93□□□□□ -0.82
LINC00299-204ENST00000454043 USP54Q70EL1 1684 aa9.93□□□□□ -0.82
LINC00299-204ENST00000454043 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
LINC00299-204ENST00000454043 SPINT1O43278 529 aa9.92□□□□□ -0.82
LINC00299-204ENST00000454043 MAN1A2O60476 641 aa9.92□□□□□ -0.82
LINC00299-204ENST00000454043 HMOX1P09601 288 aa9.92□□□□□ -0.82
LINC00299-204ENST00000454043 NFE2L2Q16236 605 aa9.92□□□□□ -0.82
LINC00299-204ENST00000454043 SULT6B1Q6IMI4 303 aa9.92□□□□□ -0.82
LINC00299-204ENST00000454043 ARHGEF25Q86VW2 580 aa9.92□□□□□ -0.82
LINC00299-204ENST00000454043 ZNF784Q8NCA9 323 aaPredicted RBP9.92□□□□□ -0.82
LINC00299-204ENST00000454043 SLC16A10Q8TF71 515 aa9.92□□□□□ -0.82
LINC00299-204ENST00000454043 TNS3Q68CZ2 1445 aa9.91□□□□□ -0.82
LINC00299-204ENST00000454043 IL16Q14005 1332 aa9.91□□□□□ -0.82
LINC00299-204ENST00000454043 TOM1O60784 492 aa9.91□□□□□ -0.82
LINC00299-204ENST00000454043 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms