RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 BNIP3LO60238 219 aa6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 TCF3P15923 654 aa6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 INPP5BP32019 993 aa6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 MAPK8P45983 427 aa6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 SNRPNP63162 240 aaKnown RBP6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 LDLRAD1Q5T700 205 aa6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 NEDD1Q8NHV4 660 aa6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 OXCT2Q9BYC2 517 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 GGNBP2Q9H3C7 697 aa6.14□□□□□ -1.43
HMGB1P15-201ENST00000453854 PCSK2P16519 638 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 DAB2P98082 770 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 CTBSQ01459 385 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 XKR5Q6UX68 686 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 TMC4Q7Z404 712 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 BTLAQ7Z6A9 289 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 PIK3R5Q8WYR1 880 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 DUSP9Q99956 384 aaKnown RBP6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 BCL11AQ9H165 835 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 CRISPLD1Q9H336 500 aa6.13□□□□□ -1.43
HMGB1P15-201ENST00000453854 MAP2K3P46734 347 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 IDH3AP50213 366 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 LBRQ14739 615 aaKnown RBP6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 ALG1LQ6GMV1 187 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 PGBD3Q8N328 593 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 FBF1Q8TES7 1133 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 DCAF5Q96JK2 942 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 HSH2DQ96JZ2 352 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 CSRNP1Q96S65 589 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 BACH2Q9BYV9 841 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 DNAJC25Q9H1X3 360 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 LRRC4BQ9NT99 713 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 PARP2Q9UGN5 583 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 WWC3Q9ULE0 1092 aa6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 NSFL1CQ9UNZ2 370 aaKnown RBP6.12□□□□□ -1.43
HMGB1P15-201ENST00000453854 PNMA6FA0A0J9YX94 578 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 NEFLP07196 543 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 HOXB4P17483 251 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 ARSDP51689 593 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 ATP2B2Q01814 1243 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 BICDL1Q6ZP65 573 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 BEND7Q8N7W2 519 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 GALNT6Q8NCL4 622 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 SETDB2Q96T68 719 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 ZCCHC2Q9C0B9 1178 aaKnown RBP6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 C11orf16Q9NQ32 467 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 RNF19AQ9NV58 838 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 ATXN7L1Q9ULK2 861 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 RTCBQ9Y3I0 505 aaKnown RBP6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 KCNMB2Q9Y691 235 aa6.11□□□□□ -1.43
HMGB1P15-201ENST00000453854 A0A1W2PNR3 127 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 EIF1AYO14602 144 aaKnown RBP6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 FGFR3P22607 806 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 GRNP28799 593 aaKnown RBP6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 ITGAEP38570 1179 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 TYRO3Q06418 890 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 ORC1Q13415 861 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 PLA2G4EQ3MJ16 856 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 C8orf34Q49A92 452 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 EFHC2Q5JST6 749 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 PDE12Q6L8Q7 609 aaKnown RBP6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 LRRC69Q6ZNQ3 347 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 PHF24Q9UPV7 400 aa6.1□□□□□ -1.43
HMGB1P15-201ENST00000453854 A6NHS1 94 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 TNFRSF21O75509 655 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 EGFRP00533 1210 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 BMP4P12644 408 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 GNA15P30679 374 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 XPCQ01831 940 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 TRIP4Q15650 581 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 ARSJQ5FYB0 599 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 SAMD5Q5TGI4 173 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 NLRP8Q86W28 1048 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 EDARADDQ8WWZ3 215 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 FRMD6Q96NE9 622 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 GGA1Q9UJY5 639 aa6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 FNDC3AQ9Y2H6 1198 aaKnown RBP6.09□□□□□ -1.43
HMGB1P15-201ENST00000453854 PHF20L1A8MW92 1017 aa6.08□□□□□ -1.44
HMGB1P15-201ENST00000453854 SCAMP3O14828 347 aaKnown RBP6.08□□□□□ -1.44
HMGB1P15-201ENST00000453854 SORBS3O60504 671 aa6.08□□□□□ -1.44
HMGB1P15-201ENST00000453854 CPNE3O75131 537 aaKnown RBP6.08□□□□□ -1.44
HMGB1P15-201ENST00000453854 TTC16Q8NEE8 873 aa6.08□□□□□ -1.44
HMGB1P15-201ENST00000453854 FAM161BQ96MY7 647 aa6.08□□□□□ -1.44
HMGB1P15-201ENST00000453854 NEUROD4Q9HD90 331 aa6.08□□□□□ -1.44
HMGB1P15-201ENST00000453854 KLF15Q9UIH9 416 aa6.08□□□□□ -1.44
HMGB1P15-201ENST00000453854 DCDC2BA2VCK2 349 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 IGSF3O75054 1194 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 IGHA1P01876 353 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 PROCP04070 461 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 COL8A1P27658 744 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 KCNQ4P56696 695 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 PSMD2Q13200 908 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 PODNQ7Z5L7 613 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 SNX29Q8TEQ0 813 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 SPOCK3Q9BQ16 436 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 ELP3Q9H9T3 547 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 GDF2Q9UK05 429 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 USP20Q9Y2K6 914 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 PCDHGC4Q9Y5F7 938 aa6.07□□□□□ -1.44
HMGB1P15-201ENST00000453854 KRBA1A5PL33 1030 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms