RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 HPS1Q92902 700 aa6.34□□□□□ -1.39
HMGN3P1-201ENST00000453847 RNF166Q96A37 237 aaPredicted RBP6.34□□□□□ -1.39
HMGN3P1-201ENST00000453847 TLDC2A0PJX2 215 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 PHACTR2O75167 634 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 GTF2E1P29083 439 aaPredicted RBP6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 HIF1AQ16665 826 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 NBPF1Q3BBV0 1214 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 PMFBP1Q8TBY8 1022 aa6.33□□□□□ -1.4
HMGN3P1-201ENST00000453847 EGFRP00533 1210 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 MSX1P28360 303 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 VEGFBP49765 207 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 TYRO3Q06418 890 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 IFFO2Q5TF58 517 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 TRIM67Q6ZTA4 783 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 PRICKLE2Q7Z3G6 844 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 RNF217Q8TC41 542 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 TSEN34Q9BSV6 310 aaKnown RBP6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 LATS2Q9NRM7 1088 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 KBTBD4Q9NVX7 518 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 ANKIB1Q9P2G1 1089 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 ADAMTS1Q9UHI8 967 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 FNDC3AQ9Y2H6 1198 aaKnown RBP6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 TBX22Q9Y458 520 aa6.32□□□□□ -1.4
HMGN3P1-201ENST00000453847 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 CYP2E1P05181 493 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 TATP17735 454 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 CDK11BP21127 795 aaKnown RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 CTC1Q2NKJ3 1217 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 KIAA0319Q5VV43 1072 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 PEAR1Q5VY43 1037 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 BICDL1Q6ZP65 573 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 SPNS2Q8IVW8 549 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 NLGN1Q8N2Q7 840 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 RASGRP4Q8TDF6 673 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 ZCCHC2Q9C0B9 1178 aaKnown RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 SRCIN1Q9C0H9 1055 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 SUV39H2Q9H5I1 410 aa6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 POLMQ9NP87 494 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 CDK11AQ9UQ88 783 aaPredicted RBP6.31□□□□□ -1.4
HMGN3P1-201ENST00000453847 A0A1W2PP55 124 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 TTC24A2A3L6 582 aaPredicted RBP6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 F6X3S4 739 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 TNFRSF10AO00220 468 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 XYLBO75191 536 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 GPRASP2Q96D09 838 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 ZSWIM4Q9H7M6 989 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 SALL4Q9UJQ4 1053 aa6.3□□□□□ -1.4
HMGN3P1-201ENST00000453847 PPM1GO15355 546 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 GADD45BO75293 160 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 RHOQP17081 205 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 ZNF746Q6NUN9 644 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 VPS37DQ86XT2 251 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 CYP4X1Q8N118 509 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 NOC4LQ9BVI4 516 aaKnown RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 HIRIP3Q9BW71 556 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 NEUROD4Q9HD90 331 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 ABI2Q9NYB9 513 aaPredicted RBP6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 SBNO2Q9Y2G9 1366 aa6.29□□□□□ -1.4
HMGN3P1-201ENST00000453847 ANKRD62A6NC57 917 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 SERINC3Q13530 473 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 EGFLAMQ63HQ2 1017 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 SDE2Q6IQ49 451 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 JAZF1Q86VZ6 243 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 NLRP13Q86W25 1043 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 EAF1Q96JC9 268 aaPredicted RBP6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 CEP63Q96MT8 703 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 OSBPL2Q9H1P3 480 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 HCN2Q9UL51 889 aa6.28□□□□□ -1.4
HMGN3P1-201ENST00000453847 A0A1B0GTH6 734 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 STK10O94804 968 aaKnown RBP6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 THBS1P07996 1170 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 GARTP22102 1010 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 LYSMD3Q7Z3D4 306 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 SPON2Q9BUD6 331 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 TIMMDC1Q9NPL8 285 aa6.27□□□□□ -1.41
HMGN3P1-201ENST00000453847 MINDY4BA8MYZ0 360 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 CAPN5O15484 640 aaPredicted RBP6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 SASH3O75995 380 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 CES1P23141 567 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 GSTT1P30711 240 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 TCEAL1Q15170 157 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 SOGA3Q5TF21 947 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 ANKRD24Q8TF21 1146 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 SEC16BQ96JE7 1060 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 TCF12Q99081 682 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 CRISPLD1Q9H336 500 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 ABCB6Q9NP58 842 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 C11orf16Q9NQ32 467 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 KCNQ5Q9NR82 932 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 KANSL3Q9P2N6 904 aa6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 TMA7Q9Y2S6 64 aaKnown RBP6.26□□□□□ -1.41
HMGN3P1-201ENST00000453847 TARSP26639 723 aaKnown RBP6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 ETFBP38117 255 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms