RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 LARGE2Q8N3Y3 721 aa18.18■□□□□ 0.5
RFTN1-207ENST00000453536 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
RFTN1-207ENST00000453536 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
RFTN1-207ENST00000453536 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
RFTN1-207ENST00000453536 FSTL1Q12841 308 aa18.17■□□□□ 0.5
RFTN1-207ENST00000453536 CCDC30Q5VVM6 783 aa18.17■□□□□ 0.5
RFTN1-207ENST00000453536 PI4KAP1Q8N8J0 262 aa18.17■□□□□ 0.5
RFTN1-207ENST00000453536 TAF1DQ9H5J8 278 aaPredicted RBP18.17■□□□□ 0.5
RFTN1-207ENST00000453536 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
RFTN1-207ENST00000453536 FMR1Q06787 632 aaKnown RBP eCLIP18.16■□□□□ 0.5
RFTN1-207ENST00000453536 EAPPQ56P03 285 aaPredicted RBP18.16■□□□□ 0.5
RFTN1-207ENST00000453536 DDX46Q7L014 1031 aaKnown RBP18.16■□□□□ 0.5
RFTN1-207ENST00000453536 L3MBTL3Q96JM7 780 aaPredicted RBP18.16■□□□□ 0.5
RFTN1-207ENST00000453536 METTL22Q9BUU2 404 aaPredicted RBP18.16■□□□□ 0.5
RFTN1-207ENST00000453536 WTIPA6NIX2 430 aaPredicted RBP18.15■□□□□ 0.5
RFTN1-207ENST00000453536 CACNA1FO60840 1977 aa18.15■□□□□ 0.5
RFTN1-207ENST00000453536 YDJCA8MPS7 323 aa18.14■□□□□ 0.49
RFTN1-207ENST00000453536 VAMP4O75379 141 aa18.14■□□□□ 0.49
RFTN1-207ENST00000453536 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
RFTN1-207ENST00000453536 EPS15P42566 896 aa18.14■□□□□ 0.49
RFTN1-207ENST00000453536 SCNN1DP51172 638 aa18.14■□□□□ 0.49
RFTN1-207ENST00000453536 GPSM2P81274 684 aa18.14■□□□□ 0.49
RFTN1-207ENST00000453536 SF3B3Q15393 1217 aaKnown RBP18.14■□□□□ 0.49
RFTN1-207ENST00000453536 DPP8Q6V1X1 898 aaPredicted RBP18.14■□□□□ 0.49
RFTN1-207ENST00000453536 SP8Q8IXZ3 490 aa18.14■□□□□ 0.49
RFTN1-207ENST00000453536 IL16Q14005 1332 aa18.14■□□□□ 0.49
RFTN1-207ENST00000453536 TRIM28Q13263 835 aaKnown RBP18.13■□□□□ 0.49
RFTN1-207ENST00000453536 CC2D2BQ6DHV5 1058 aa18.13■□□□□ 0.49
RFTN1-207ENST00000453536 KSR2Q6VAB6 950 aa18.13■□□□□ 0.49
RFTN1-207ENST00000453536 MPNDQ8N594 471 aa18.13■□□□□ 0.49
RFTN1-207ENST00000453536 ZBTB38Q8NAP3 1195 aaPredicted RBP18.13■□□□□ 0.49
RFTN1-207ENST00000453536 RIMBP2O15034 1052 aa18.12■□□□□ 0.49
RFTN1-207ENST00000453536 EPHX2P34913 555 aa18.12■□□□□ 0.49
RFTN1-207ENST00000453536 CHADLQ6NUI6 762 aa18.12■□□□□ 0.49
RFTN1-207ENST00000453536 JDP2Q8WYK2 163 aa18.12■□□□□ 0.49
RFTN1-207ENST00000453536 RTFDC1Q9BY42 306 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-207ENST00000453536 KCNQ5Q9NR82 932 aa18.12■□□□□ 0.49
RFTN1-207ENST00000453536 CWC25Q9NXE8 425 aaPredicted RBP18.12■□□□□ 0.49
RFTN1-207ENST00000453536 POLLQ9UGP5 575 aa18.12■□□□□ 0.49
RFTN1-207ENST00000453536 HACL1Q9UJ83 578 aa18.12■□□□□ 0.49
RFTN1-207ENST00000453536 A0A1B0GUL6 1792 aa18.12■□□□□ 0.49
RFTN1-207ENST00000453536 F6X3S4 739 aa18.11■□□□□ 0.49
RFTN1-207ENST00000453536 BBOX1O75936 387 aa18.11■□□□□ 0.49
RFTN1-207ENST00000453536 RAD17O75943 681 aa18.11■□□□□ 0.49
RFTN1-207ENST00000453536 PCCAP05165 728 aaPredicted RBP18.11■□□□□ 0.49
RFTN1-207ENST00000453536 CXCL9Q07325 125 aa18.11■□□□□ 0.49
RFTN1-207ENST00000453536 MAP1SQ66K74 1059 aaPredicted RBP18.11■□□□□ 0.49
RFTN1-207ENST00000453536 NIM1KQ8IY84 436 aa18.11■□□□□ 0.49
RFTN1-207ENST00000453536 ZNF646O15015 1829 aaPredicted RBP18.11■□□□□ 0.49
RFTN1-207ENST00000453536 NEURL1BA8MQ27 555 aa18.1■□□□□ 0.49
RFTN1-207ENST00000453536 EIF6P56537 245 aaKnown RBP18.1■□□□□ 0.49
RFTN1-207ENST00000453536 FLIIQ13045 1269 aa18.1■□□□□ 0.49
RFTN1-207ENST00000453536 GPC2Q8N158 579 aa18.1■□□□□ 0.49
RFTN1-207ENST00000453536 CCDC191Q8NCU4 936 aa18.1■□□□□ 0.49
RFTN1-207ENST00000453536 KLRG1Q96E93 195 aa18.1■□□□□ 0.49
RFTN1-207ENST00000453536 STK31Q9BXU1 1019 aa18.1■□□□□ 0.49
RFTN1-207ENST00000453536 DBNDD1Q9H9R9 158 aa18.1■□□□□ 0.49
RFTN1-207ENST00000453536 NSFL1CQ9UNZ2 370 aaKnown RBP18.1■□□□□ 0.49
RFTN1-207ENST00000453536 ZNF521Q96K83 1311 aa18.09■□□□□ 0.49
RFTN1-207ENST00000453536 KIAA2012Q0VF49 1180 aa18.09■□□□□ 0.49
RFTN1-207ENST00000453536 WDR63Q8IWG1 891 aa18.09■□□□□ 0.49
RFTN1-207ENST00000453536 CLEC11AQ9Y240 323 aa18.09■□□□□ 0.49
RFTN1-207ENST00000453536 PASKQ96RG2 1323 aa18.08■□□□□ 0.49
RFTN1-207ENST00000453536 DDX58O95786 925 aaKnown RBP18.08■□□□□ 0.48
RFTN1-207ENST00000453536 DOK7Q18PE1 504 aa18.08■□□□□ 0.48
RFTN1-207ENST00000453536 UBE3BQ7Z3V4 1068 aa18.08■□□□□ 0.48
RFTN1-207ENST00000453536 POLR2AP24928 1970 aaKnown RBP18.08■□□□□ 0.48
RFTN1-207ENST00000453536 IQCA1LA6NCM1 817 aa18.07■□□□□ 0.48
RFTN1-207ENST00000453536 PDE8AO60658 829 aa18.07■□□□□ 0.48
RFTN1-207ENST00000453536 ITGBL1O95965 494 aaPredicted RBP18.07■□□□□ 0.48
RFTN1-207ENST00000453536 GMPSP49915 693 aaPredicted RBP18.07■□□□□ 0.48
RFTN1-207ENST00000453536 RPS8P62241 208 aaKnown RBP18.07■□□□□ 0.48
RFTN1-207ENST00000453536 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
RFTN1-207ENST00000453536 DLK2Q6UY11 383 aa18.07■□□□□ 0.48
RFTN1-207ENST00000453536 LDHDQ86WU2 507 aa18.07■□□□□ 0.48
RFTN1-207ENST00000453536 GREM2Q9H772 168 aa18.07■□□□□ 0.48
RFTN1-207ENST00000453536 MKRN1Q9UHC7 482 aaKnown RBP18.07■□□□□ 0.48
RFTN1-207ENST00000453536 ZBTB12Q9Y330 459 aaPredicted RBP18.07■□□□□ 0.48
RFTN1-207ENST00000453536 PSME4Q14997 1843 aa18.07■□□□□ 0.48
RFTN1-207ENST00000453536 RTL9Q8NET4 1388 aa18.06■□□□□ 0.48
RFTN1-207ENST00000453536 CASP7P55210 303 aa18.06■□□□□ 0.48
RFTN1-207ENST00000453536 ZNRF3Q9ULT6 936 aa18.06■□□□□ 0.48
RFTN1-207ENST00000453536 TRPM7Q96QT4 1865 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 CDHR2Q9BYE9 1310 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 C6orf229H3BNL8 230 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 TRAF5O00463 557 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 EGFRP00533 1210 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 CTSWP56202 376 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 TTLL11Q8NHH1 800 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 TBC1D16Q8TBP0 767 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 TRPM4Q8TD43 1214 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 CDCA7LQ96GN5 454 aa18.05■□□□□ 0.48
RFTN1-207ENST00000453536 GCKRQ14397 625 aa18.04■□□□□ 0.48
RFTN1-207ENST00000453536 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
RFTN1-207ENST00000453536 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
RFTN1-207ENST00000453536 GPRC5DQ9NZD1 345 aa18.04■□□□□ 0.48
RFTN1-207ENST00000453536 H7C1W4 665 aa18.03■□□□□ 0.48
RFTN1-207ENST00000453536 PSMD14O00487 310 aa18.03■□□□□ 0.48
RFTN1-207ENST00000453536 UFL1O94874 794 aa18.03■□□□□ 0.48
RFTN1-207ENST00000453536 HIRAP54198 1017 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms