RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 HSPA4P34932 840 aa9.74□□□□□ -0.85
SMCO1-202ENST00000452776 TXLNAP40222 546 aa9.74□□□□□ -0.85
SMCO1-202ENST00000452776 GNAI1P63096 354 aa9.74□□□□□ -0.85
SMCO1-202ENST00000452776 DNM1Q05193 864 aaKnown RBP9.74□□□□□ -0.85
SMCO1-202ENST00000452776 IQCB1Q15051 598 aa9.74□□□□□ -0.85
SMCO1-202ENST00000452776 E2F4Q16254 413 aa9.74□□□□□ -0.85
SMCO1-202ENST00000452776 ERVK-7P63135 1459 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 CEP152O94986 1710 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 ASXL2Q76L83 1435 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 LONRF2Q1L5Z9 754 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 EP400NLQ6ZTU2 488 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 CTCFLQ8NI51 663 aaPredicted RBP9.73□□□□□ -0.85
SMCO1-202ENST00000452776 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 MTMR6Q9Y217 621 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 IQGAP3Q86VI3 1631 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 AOX1Q06278 1338 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
SMCO1-202ENST00000452776 TTC36A6NLP5 189 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 SASH3O75995 380 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 URI1O94763 535 aaPredicted RBP9.72□□□□□ -0.85
SMCO1-202ENST00000452776 NEFHP12036 1026 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 USP5P45974 858 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 PDE1AP54750 535 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 CRYMQ14894 314 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 E4F1Q66K89 784 aaPredicted RBP9.72□□□□□ -0.85
SMCO1-202ENST00000452776 RSRC2Q7L4I2 434 aaKnown RBP9.72□□□□□ -0.85
SMCO1-202ENST00000452776 RNF217Q8TC41 542 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 VEZTQ9HBM0 779 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 ANO2Q9NQ90 1003 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 PDRG1Q9NUG6 133 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 TERF2IPQ9NYB0 399 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 DACT1Q9NYF0 836 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 VPS18Q9P253 973 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 ADGRL3Q9HAR2 1447 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 CLSTN1O94985 981 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 CHMLP26374 656 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 HNRNPH1P31943 449 aaKnown RBP9.72□□□□□ -0.85
SMCO1-202ENST00000452776 MAP3K9P80192 1104 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 C16orf71Q8IYS4 520 aaPredicted RBP9.72□□□□□ -0.85
SMCO1-202ENST00000452776 MIEF2Q96C03 454 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 PARD6BQ9BYG5 372 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 C1orf115Q9H7X2 142 aa9.72□□□□□ -0.85
SMCO1-202ENST00000452776 TTC21AQ8NDW8 1320 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 ATXN2Q99700 1313 aaKnown RBP9.71□□□□□ -0.85
SMCO1-202ENST00000452776 CHUKO15111 745 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 MYO1BO43795 1136 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 FCHSD2O94868 740 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 MCM3P25205 808 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 NBPF6Q5VWK0 638 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 LRRC31Q6UY01 552 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 NBPF5PQ86XG9 351 aaPredicted RBP9.71□□□□□ -0.85
SMCO1-202ENST00000452776 ANKRD18AQ8IVF6 992 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 CEP57L1Q8IYX8 460 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 SGSM3Q96HU1 749 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 SPATA32Q96LK8 384 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 NBPF4Q96M43 638 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 BPIFA3Q9BQP9 254 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 CARD6Q9BX69 1037 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 TM6SF1Q9BZW5 370 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 DNAJC25Q9H1X3 360 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 VIPAS39Q9H9C1 493 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 CFAP45Q9UL16 551 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 TDRD9Q8NDG6 1382 aaKnown RBP9.71□□□□□ -0.85
SMCO1-202ENST00000452776 NEURL4Q96JN8 1562 aa9.71□□□□□ -0.85
SMCO1-202ENST00000452776 FANCAO15360 1455 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 EBAG9O00559 213 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 SEC31AO94979 1220 aaKnown RBP9.7□□□□□ -0.86
SMCO1-202ENST00000452776 GCFC2P16383 781 aaKnown RBP9.7□□□□□ -0.86
SMCO1-202ENST00000452776 GJB2P29033 226 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 NF2P35240 595 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 GNL2Q13823 731 aaKnown RBP9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CAMK4Q16566 473 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 VPS53Q5VIR6 699 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CCDC30Q5VVM6 783 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CCDC50Q8IVM0 306 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CKAP2LQ8IYA6 745 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 TEX11Q8IYF3 940 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CEP112Q8N8E3 955 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CCDC34Q96HJ3 373 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CABS1Q96KC9 395 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 TTC14Q96N46 770 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CDC42BPAQ5VT25 1732 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 PTPRTO14522 1441 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 YTHDC2Q9H6S0 1430 aaKnown RBP9.7□□□□□ -0.86
SMCO1-202ENST00000452776 ANKRD33BA6NCL7 494 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 ARID3CA6NKF2 412 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 ATL3Q6DD88 541 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 CEP85Q6P2H3 762 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 BICD2Q8TD16 824 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 PAIP2Q9BPZ3 127 aaKnown RBP9.7□□□□□ -0.86
SMCO1-202ENST00000452776 STAP2Q9UGK3 403 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 RAB21Q9UL25 225 aa9.7□□□□□ -0.86
SMCO1-202ENST00000452776 A0A1B0GUA9 196 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 CBFA2T2O43439 604 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 ELF1P32519 619 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 PPP2R3AQ06190 1150 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 PPP2R5AQ15172 486 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 MAP9Q49MG5 647 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 LARP1BQ659C4 914 aaKnown RBP9.69□□□□□ -0.86
SMCO1-202ENST00000452776 B4GALNT4Q76KP1 1039 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms