RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
USP1-204ENST00000452143 AOC3Q16853 763 aa14.22□□□□□ -0.13
USP1-204ENST00000452143 TMC4Q7Z404 712 aa14.22□□□□□ -0.13
USP1-204ENST00000452143 SLC51AQ86UW1 340 aa14.22□□□□□ -0.13
USP1-204ENST00000452143 RUNDC1Q96C34 613 aa14.22□□□□□ -0.13
USP1-204ENST00000452143 PRDM10Q9NQV6 1147 aa14.22□□□□□ -0.13
USP1-204ENST00000452143 TAF1P21675 1872 aa14.22□□□□□ -0.13
USP1-204ENST00000452143 EPS15P42566 896 aa14.21□□□□□ -0.13
USP1-204ENST00000452143 CTCFP49711 727 aaPredicted RBP14.21□□□□□ -0.13
USP1-204ENST00000452143 AIMP1Q12904 312 aaKnown RBP14.21□□□□□ -0.13
USP1-204ENST00000452143 WDR43Q15061 677 aaKnown RBP eCLIP14.21□□□□□ -0.13
USP1-204ENST00000452143 DEFB115Q30KQ5 88 aa14.21□□□□□ -0.13
USP1-204ENST00000452143 DPP8Q6V1X1 898 aaPredicted RBP14.21□□□□□ -0.13
USP1-204ENST00000452143 DDX46Q7L014 1031 aaKnown RBP14.21□□□□□ -0.13
USP1-204ENST00000452143 SP8Q8IXZ3 490 aa14.21□□□□□ -0.13
USP1-204ENST00000452143 ADARB2Q9NS39 739 aaKnown RBP14.21□□□□□ -0.13
USP1-204ENST00000452143 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.13
USP1-204ENST00000452143 TRMT112Q9UI30 125 aaKnown RBP14.21□□□□□ -0.13
USP1-204ENST00000452143 ZNRF3Q9ULT6 936 aa14.21□□□□□ -0.13
USP1-204ENST00000452143 ABT1Q9ULW3 272 aaKnown RBP14.21□□□□□ -0.13
USP1-204ENST00000452143 KIAA2012Q0VF49 1180 aa14.2□□□□□ -0.14
USP1-204ENST00000452143 GRAPQ13588 217 aa14.2□□□□□ -0.14
USP1-204ENST00000452143 HDGFL1Q5TGJ6 251 aa14.2□□□□□ -0.14
USP1-204ENST00000452143 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
USP1-204ENST00000452143 GRAPLQ8TC17 118 aaPredicted RBP14.2□□□□□ -0.14
USP1-204ENST00000452143 NECTIN2Q92692 538 aa14.2□□□□□ -0.14
USP1-204ENST00000452143 WBP1LQ9NX94 342 aa14.2□□□□□ -0.14
USP1-204ENST00000452143 CHPF2Q9P2E5 772 aa14.2□□□□□ -0.14
USP1-204ENST00000452143 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
USP1-204ENST00000452143 HCLS1P14317 486 aaPredicted RBP14.19□□□□□ -0.14
USP1-204ENST00000452143 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
USP1-204ENST00000452143 NEUROD2Q15784 382 aa14.19□□□□□ -0.14
USP1-204ENST00000452143 MPNDQ8N594 471 aa14.19□□□□□ -0.14
USP1-204ENST00000452143 PLBD2Q8NHP8 589 aa14.19□□□□□ -0.14
USP1-204ENST00000452143 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
USP1-204ENST00000452143 WDR33Q9C0J8 1336 aaKnown RBP14.18□□□□□ -0.14
USP1-204ENST00000452143 CXCL9Q07325 125 aa14.18□□□□□ -0.14
USP1-204ENST00000452143 KRT24Q2M2I5 525 aa14.18□□□□□ -0.14
USP1-204ENST00000452143 CFAP44Q96MT7 982 aa14.18□□□□□ -0.14
USP1-204ENST00000452143 ECE1P42892 770 aa14.17□□□□□ -0.14
USP1-204ENST00000452143 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
USP1-204ENST00000452143 CIAPIN1Q6FI81 312 aa14.17□□□□□ -0.14
USP1-204ENST00000452143 ANKRD13DQ6ZTN6 518 aa14.17□□□□□ -0.14
USP1-204ENST00000452143 HYPKQ9NX55 129 aa14.17□□□□□ -0.14
USP1-204ENST00000452143 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
USP1-204ENST00000452143 GMPSP49915 693 aaPredicted RBP14.16□□□□□ -0.14
USP1-204ENST00000452143 TNIP1Q15025 636 aa14.16□□□□□ -0.14
USP1-204ENST00000452143 ISCA1Q9BUE6 129 aa14.16□□□□□ -0.14
USP1-204ENST00000452143 SF3B3Q15393 1217 aaKnown RBP14.15□□□□□ -0.14
USP1-204ENST00000452143 ZC3H15Q8WU90 426 aaKnown RBP14.15□□□□□ -0.14
USP1-204ENST00000452143 PGAP2Q9UHJ9 254 aa14.15□□□□□ -0.14
USP1-204ENST00000452143 ADAMTS8Q9UP79 889 aa14.15□□□□□ -0.14
USP1-204ENST00000452143 TLL2Q9Y6L7 1015 aa14.15□□□□□ -0.14
USP1-204ENST00000452143 TRAF5O00463 557 aa14.14□□□□□ -0.15
USP1-204ENST00000452143 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
USP1-204ENST00000452143 LBX1P52954 281 aa14.14□□□□□ -0.15
USP1-204ENST00000452143 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
USP1-204ENST00000452143 TRIM28Q13263 835 aaKnown RBP14.14□□□□□ -0.15
USP1-204ENST00000452143 CST9Q5W186 159 aa14.14□□□□□ -0.15
USP1-204ENST00000452143 HHIPL1Q96JK4 782 aa14.14□□□□□ -0.15
USP1-204ENST00000452143 CAPNS2Q96L46 248 aa14.14□□□□□ -0.15
USP1-204ENST00000452143 BCL2L13Q9BXK5 485 aa14.14□□□□□ -0.15
USP1-204ENST00000452143 COL4A1P02462 1669 aa14.14□□□□□ -0.15
USP1-204ENST00000452143 PSME4Q14997 1843 aa14.13□□□□□ -0.15
USP1-204ENST00000452143 RAD17O75943 681 aa14.13□□□□□ -0.15
USP1-204ENST00000452143 HSPA8P11142 646 aaKnown RBP14.13□□□□□ -0.15
USP1-204ENST00000452143 HSP90B1P14625 803 aaKnown RBP14.13□□□□□ -0.15
USP1-204ENST00000452143 DUSP27Q5VZP5 1158 aa14.13□□□□□ -0.15
USP1-204ENST00000452143 PAXIP1Q6ZW49 1069 aaPredicted RBP14.13□□□□□ -0.15
USP1-204ENST00000452143 FAM89AQ96GI7 184 aa14.13□□□□□ -0.15
USP1-204ENST00000452143 MBIPQ9NS73 344 aa14.13□□□□□ -0.15
USP1-204ENST00000452143 YDJCA8MPS7 323 aa14.12□□□□□ -0.15
USP1-204ENST00000452143 ZNF853P0CG23 659 aa14.12□□□□□ -0.15
USP1-204ENST00000452143 FMR1Q06787 632 aaKnown RBP eCLIP14.12□□□□□ -0.154e-8■■■□□ 18.7
USP1-204ENST00000452143 GOLGA2Q08379 1002 aa14.12□□□□□ -0.15
USP1-204ENST00000452143 WASHC4Q2M389 1173 aa14.12□□□□□ -0.15
USP1-204ENST00000452143 SAPCD2Q86UD0 394 aa14.12□□□□□ -0.15
USP1-204ENST00000452143 CELF1Q92879 486 aaKnown RBP14.12□□□□□ -0.15
USP1-204ENST00000452143 BEGAINQ9BUH8 593 aa14.12□□□□□ -0.15
USP1-204ENST00000452143 PRKRIP1Q9H875 184 aaPredicted RBP14.12□□□□□ -0.15
USP1-204ENST00000452143 IFT57Q9NWB7 429 aa14.12□□□□□ -0.15
USP1-204ENST00000452143 MYH3P11055 1940 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 IRS4O14654 1257 aaPredicted RBP14.11□□□□□ -0.15
USP1-204ENST00000452143 CELF2O95319 508 aaKnown RBP14.11□□□□□ -0.15
USP1-204ENST00000452143 MAP2K2P36507 400 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 CYP4F22Q6NT55 531 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 CDC37L1Q7L3B6 337 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 DPF2Q92785 391 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 GPR101Q96P66 508 aaPredicted RBP14.11□□□□□ -0.15
USP1-204ENST00000452143 EYA3Q99504 573 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 CHMP4AQ9BY43 222 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 CNOT7Q9UIV1 285 aaKnown RBP14.11□□□□□ -0.15
USP1-204ENST00000452143 NSFL1CQ9UNZ2 370 aaKnown RBP14.11□□□□□ -0.15
USP1-204ENST00000452143 SCN9AQ15858 1988 aa14.11□□□□□ -0.15
USP1-204ENST00000452143 H7C1D1 291 aa14.1□□□□□ -0.15
USP1-204ENST00000452143 RPS12P25398 132 aaKnown RBP14.1□□□□□ -0.15
USP1-204ENST00000452143 HIRAP54198 1017 aaPredicted RBP14.1□□□□□ -0.15
USP1-204ENST00000452143 GNAI1P63096 354 aa14.1□□□□□ -0.15
USP1-204ENST00000452143 RIC3Q7Z5B4 369 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms