RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 COL4A1P02462 1669 aa20.6■□□□□ 0.89
SCAMP4-205ENST00000452128 GLTPD2A6NH11 291 aa20.59■□□□□ 0.89
SCAMP4-205ENST00000452128 F6X3S4 739 aa20.59■□□□□ 0.89
SCAMP4-205ENST00000452128 PDE8AO60658 829 aa20.59■□□□□ 0.89
SCAMP4-205ENST00000452128 DDX46Q7L014 1031 aaKnown RBP20.59■□□□□ 0.89
SCAMP4-205ENST00000452128 SSH1Q8WYL5 1049 aa20.59■□□□□ 0.89
SCAMP4-205ENST00000452128 CELF1Q92879 486 aaKnown RBP20.59■□□□□ 0.89
SCAMP4-205ENST00000452128 NMRK2Q9NPI5 230 aa20.59■□□□□ 0.89
SCAMP4-205ENST00000452128 POTECB2RU33 542 aa20.58■□□□□ 0.89
SCAMP4-205ENST00000452128 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
SCAMP4-205ENST00000452128 PLA2G12BQ9BX93 195 aa20.58■□□□□ 0.89
SCAMP4-205ENST00000452128 C1QTNF8P60827 252 aa20.57■□□□□ 0.88
SCAMP4-205ENST00000452128 CACNA1SQ13698 1873 aa20.57■□□□□ 0.88
SCAMP4-205ENST00000452128 HSP90B1P14625 803 aaKnown RBP20.56■□□□□ 0.88
SCAMP4-205ENST00000452128 IARSP41252 1262 aaKnown RBP20.56■□□□□ 0.88
SCAMP4-205ENST00000452128 TMC4Q7Z404 712 aa20.56■□□□□ 0.88
SCAMP4-205ENST00000452128 TTLL11Q8NHH1 800 aa20.56■□□□□ 0.88
SCAMP4-205ENST00000452128 SEC31BQ9NQW1 1179 aa20.56■□□□□ 0.88
SCAMP4-205ENST00000452128 COL4A5P29400 1685 aa20.55■□□□□ 0.88
SCAMP4-205ENST00000452128 FZD9O00144 591 aa20.55■□□□□ 0.88
SCAMP4-205ENST00000452128 CT47B1P0C2W7 299 aaPredicted RBP20.55■□□□□ 0.88
SCAMP4-205ENST00000452128 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
SCAMP4-205ENST00000452128 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-205ENST00000452128 ALDH1L2Q3SY69 923 aa20.55■□□□□ 0.88
SCAMP4-205ENST00000452128 CCDC88AQ3V6T2 1871 aa20.55■□□□□ 0.88
SCAMP4-205ENST00000452128 DICER1Q9UPY3 1922 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-205ENST00000452128 CSF1RP07333 972 aa20.54■□□□□ 0.88
SCAMP4-205ENST00000452128 VPS33BQ9H267 617 aa20.54■□□□□ 0.88
SCAMP4-205ENST00000452128 KDM2BQ8NHM5 1336 aa20.53■□□□□ 0.88
SCAMP4-205ENST00000452128 CTSWP56202 376 aa20.53■□□□□ 0.88
SCAMP4-205ENST00000452128 UBE3BQ7Z3V4 1068 aa20.53■□□□□ 0.88
SCAMP4-205ENST00000452128 RRAGCQ9HB90 399 aa20.53■□□□□ 0.88
SCAMP4-205ENST00000452128 RTL9Q8NET4 1388 aa20.53■□□□□ 0.88
SCAMP4-205ENST00000452128 TAF1P21675 1872 aa20.53■□□□□ 0.88
SCAMP4-205ENST00000452128 CCDC152Q4G0S7 254 aa20.52■□□□□ 0.88
SCAMP4-205ENST00000452128 ALDH1L1O75891 902 aa20.51■□□□□ 0.87
SCAMP4-205ENST00000452128 MPNDQ8N594 471 aa20.51■□□□□ 0.87
SCAMP4-205ENST00000452128 PTPRCP08575 1304 aa20.51■□□□□ 0.87
SCAMP4-205ENST00000452128 DDNO94850 711 aaPredicted RBP20.5■□□□□ 0.87
SCAMP4-205ENST00000452128 FOXO4P98177 505 aa20.5■□□□□ 0.87
SCAMP4-205ENST00000452128 L3MBTL3Q96JM7 780 aaPredicted RBP20.5■□□□□ 0.87
SCAMP4-205ENST00000452128 GREM2Q9H772 168 aa20.5■□□□□ 0.87
SCAMP4-205ENST00000452128 ZNF541Q9H0D2 1346 aa20.5■□□□□ 0.87
SCAMP4-205ENST00000452128 RARSP54136 660 aaKnown RBP20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 GPSM2P81274 684 aa20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 DPY19L2Q6NUT2 758 aa20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 DPP8Q6V1X1 898 aaPredicted RBP20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 PODXL2Q9NZ53 605 aa20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 POLLQ9UGP5 575 aa20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 DUOX1Q9NRD9 1551 aa20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 LRRC37AA6NMS7 1700 aa20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 UTYO14607 1347 aa20.49■□□□□ 0.87
SCAMP4-205ENST00000452128 TOMM70O94826 608 aa20.48■□□□□ 0.87
SCAMP4-205ENST00000452128 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
SCAMP4-205ENST00000452128 KIAA2012Q0VF49 1180 aa20.48■□□□□ 0.87
SCAMP4-205ENST00000452128 EPHA10Q5JZY3 1008 aa20.48■□□□□ 0.87
SCAMP4-205ENST00000452128 KAZALD1Q96I82 304 aa20.48■□□□□ 0.87
SCAMP4-205ENST00000452128 CCDC85AQ96PX6 553 aaPredicted RBP20.48■□□□□ 0.87
SCAMP4-205ENST00000452128 BCL2L13Q9BXK5 485 aa20.48■□□□□ 0.87
SCAMP4-205ENST00000452128 TIAM2Q8IVF5 1701 aa20.47■□□□□ 0.87
SCAMP4-205ENST00000452128 GRM8O00222 908 aa20.47■□□□□ 0.87
SCAMP4-205ENST00000452128 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
SCAMP4-205ENST00000452128 SUPT20HQ8NEM7 779 aa20.47■□□□□ 0.87
SCAMP4-205ENST00000452128 SRCIN1Q9C0H9 1055 aa20.47■□□□□ 0.87
SCAMP4-205ENST00000452128 WDR90Q96KV7 1748 aa20.47■□□□□ 0.87
SCAMP4-205ENST00000452128 AOC3Q16853 763 aa20.46■□□□□ 0.87
SCAMP4-205ENST00000452128 LARGE2Q8N3Y3 721 aa20.46■□□□□ 0.87
SCAMP4-205ENST00000452128 BSDC1Q9NW68 430 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-205ENST00000452128 LTBP1Q14766 1721 aa20.45■□□□□ 0.86
SCAMP4-205ENST00000452128 PPIP5K2O43314 1243 aa20.45■□□□□ 0.86
SCAMP4-205ENST00000452128 TBC1D16Q8TBP0 767 aa20.45■□□□□ 0.86
SCAMP4-205ENST00000452128 RBM46Q8TBY0 533 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-205ENST00000452128 TMX4Q9H1E5 349 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-205ENST00000452128 NSFL1CQ9UNZ2 370 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-205ENST00000452128 SLC4A10Q6U841 1118 aa20.44■□□□□ 0.86
SCAMP4-205ENST00000452128 ANKRD18AQ8IVF6 992 aa20.44■□□□□ 0.86
SCAMP4-205ENST00000452128 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
SCAMP4-205ENST00000452128 SMC4Q9NTJ3 1288 aa20.44■□□□□ 0.86
SCAMP4-205ENST00000452128 MINPP1Q9UNW1 487 aa20.44■□□□□ 0.86
SCAMP4-205ENST00000452128 WTIPA6NIX2 430 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-205ENST00000452128 NBPF7P0C2Y1 421 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-205ENST00000452128 GPC2Q8N158 579 aa20.43■□□□□ 0.86
SCAMP4-205ENST00000452128 CDC5LQ99459 802 aaKnown RBP20.43■□□□□ 0.86
SCAMP4-205ENST00000452128 USP44Q9H0E7 712 aa20.43■□□□□ 0.86
SCAMP4-205ENST00000452128 ZNRF3Q9ULT6 936 aa20.43■□□□□ 0.86
SCAMP4-205ENST00000452128 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
SCAMP4-205ENST00000452128 YDJCA8MPS7 323 aa20.42■□□□□ 0.86
SCAMP4-205ENST00000452128 ITGA6P23229 1130 aa20.42■□□□□ 0.86
SCAMP4-205ENST00000452128 CXCL9Q07325 125 aa20.42■□□□□ 0.86
SCAMP4-205ENST00000452128 FAM161AQ3B820 660 aa20.42■□□□□ 0.86
SCAMP4-205ENST00000452128 ZBED9Q6R2W3 1325 aa20.42■□□□□ 0.86
SCAMP4-205ENST00000452128 NIM1KQ8IY84 436 aa20.41■□□□□ 0.86
SCAMP4-205ENST00000452128 ARHGAP45Q92619 1136 aa20.41■□□□□ 0.86
SCAMP4-205ENST00000452128 SUCLG2Q96I99 432 aa20.41■□□□□ 0.86
SCAMP4-205ENST00000452128 CEP350Q5VT06 3117 aa20.41■□□□□ 0.86
SCAMP4-205ENST00000452128 WASHC4Q2M389 1173 aa20.4■□□□□ 0.86
SCAMP4-205ENST00000452128 RABL6Q3YEC7 729 aaPredicted RBP20.4■□□□□ 0.86
SCAMP4-205ENST00000452128 LMBR1LQ6UX01 489 aa20.4■□□□□ 0.86
SCAMP4-205ENST00000452128 TAF1DQ9H5J8 278 aaPredicted RBP20.4■□□□□ 0.86
SCAMP4-205ENST00000452128 C9orf78Q9NZ63 289 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms