RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PPP1R13BQ96KQ4 1090 aa10.09□□□□□ -0.79
LSM5-208ENST00000450169 CHMLP26374 656 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 KRT85P78386 507 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 CLSTN2Q9H4D0 955 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 LIMCH1Q9UPQ0 1083 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 UGGT1Q9NYU2 1555 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 VPS37CA5D8V6 355 aaPredicted RBP10.08□□□□□ -0.8
LSM5-208ENST00000450169 EFCAB8A8MWE9 144 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 FECHP22830 423 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 GJB2P29033 226 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 HSPA4P34932 840 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 AK2P54819 239 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 GSDMDP57764 484 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 SATB1Q01826 763 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 E4F1Q66K89 784 aaPredicted RBP10.08□□□□□ -0.8
LSM5-208ENST00000450169 MLH3Q9UHC1 1453 aa10.08□□□□□ -0.8
LSM5-208ENST00000450169 GOLGA6L4A6NEF3 574 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 PATL2C9JE40 543 aaKnown RBP10.07□□□□□ -0.8
LSM5-208ENST00000450169 ONECUT3O60422 494 aaPredicted RBP10.07□□□□□ -0.8
LSM5-208ENST00000450169 TADA3O75528 432 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 RAPGEF3O95398 923 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 CORO7P57737 925 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 MMS22LQ6ZRQ5 1243 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 RUFY3Q7L099 469 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 SYTL4Q96C24 671 aaPredicted RBP10.07□□□□□ -0.8
LSM5-208ENST00000450169 TTC14Q96N46 770 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 SRRTQ9BXP5 876 aaKnown RBP10.07□□□□□ -0.8
LSM5-208ENST00000450169 MED4Q9NPJ6 270 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 SUFUQ9UMX1 484 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 RICTORQ6R327 1708 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 EFCAB6Q5THR3 1501 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 NEO1Q92859 1461 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 PSDA5PKW4 1024 aaPredicted RBP10.07□□□□□ -0.8
LSM5-208ENST00000450169 RPS6KA5O75582 802 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 IQCB1Q15051 598 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 TWISTNBQ3B726 338 aaPredicted RBP10.07□□□□□ -0.8
LSM5-208ENST00000450169 TSHZ3Q63HK5 1081 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 CEP89Q96ST8 783 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 ARFGAP3Q9NP61 516 aa10.07□□□□□ -0.8
LSM5-208ENST00000450169 EPB41L2O43491 1005 aaKnown RBP10.06□□□□□ -0.8
LSM5-208ENST00000450169 MAP2K2P36507 400 aa10.06□□□□□ -0.8
LSM5-208ENST00000450169 ATP6V1AP38606 617 aa10.06□□□□□ -0.8
LSM5-208ENST00000450169 CEP120Q8N960 986 aa10.06□□□□□ -0.8
LSM5-208ENST00000450169 ANKRD20A12PQ8NF67 263 aa10.06□□□□□ -0.8
LSM5-208ENST00000450169 RILPL2Q969X0 211 aa10.06□□□□□ -0.8
LSM5-208ENST00000450169 ZSCAN16Q9H4T2 348 aaPredicted RBP10.06□□□□□ -0.8
LSM5-208ENST00000450169 PHLPP2Q6ZVD8 1323 aa10.06□□□□□ -0.8
LSM5-208ENST00000450169 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
LSM5-208ENST00000450169 TTC21AQ8NDW8 1320 aa10.06□□□□□ -0.8
LSM5-208ENST00000450169 H3BQF6 201 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 CPP00450 1065 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 HOMER1Q86YM7 354 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 FUT8Q9BYC5 575 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 YTHDC2Q9H6S0 1430 aaKnown RBP10.05□□□□□ -0.8
LSM5-208ENST00000450169 HMMRO75330 724 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 TDO2P48775 406 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 EVCP57679 992 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 ETF1P62495 437 aaKnown RBP10.05□□□□□ -0.8
LSM5-208ENST00000450169 GNAI1P63096 354 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 LRRFIP1Q32MZ4 808 aaKnown RBP10.05□□□□□ -0.8
LSM5-208ENST00000450169 FOXR1Q6PIV2 292 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 EGFL6Q8IUX8 553 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 CCDC83Q8IWF9 413 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 PDRG1Q9NUG6 133 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 MKRN1Q9UHC7 482 aaKnown RBP10.05□□□□□ -0.8
LSM5-208ENST00000450169 DNAI1Q9UI46 699 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 ADGRF5Q8IZF2 1346 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 TUBGCP6Q96RT7 1819 aa10.05□□□□□ -0.8
LSM5-208ENST00000450169 ZC3H13Q5T200 1668 aaKnown RBP10.05□□□□□ -0.8
LSM5-208ENST00000450169 DIP2CQ9Y2E4 1556 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 NUTM2FA1L443 756 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 GRXCR2A6NFK2 248 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 KCNJ6P48051 423 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 PDIA6Q15084 440 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 ZRSR1Q15695 479 aaKnown RBP10.04□□□□□ -0.8
LSM5-208ENST00000450169 EFCAB13Q8IY85 973 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 GPR161Q8N6U8 529 aaKnown RBP10.04□□□□□ -0.8
LSM5-208ENST00000450169 THUMPD2Q9BTF0 503 aaKnown RBP10.04□□□□□ -0.8
LSM5-208ENST00000450169 CARD6Q9BX69 1037 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 SCAND2PQ9GZW5 306 aaPredicted RBP10.04□□□□□ -0.8
LSM5-208ENST00000450169 MBIPQ9NS73 344 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 MSH6P52701 1360 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 DIP2BQ9P265 1576 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 QRICH2Q9H0J4 1663 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 BECN2A8MW95 431 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 NR1I2O75469 434 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 SMC2O95347 1197 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 LARGE1O95461 756 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 GNAI3P08754 354 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 PRKAR2AP13861 404 aaKnown RBP10.04□□□□□ -0.8
LSM5-208ENST00000450169 C11orf57Q6ZUT1 292 aaPredicted RBP10.04□□□□□ -0.8
LSM5-208ENST00000450169 SPATA32Q96LK8 384 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
LSM5-208ENST00000450169 VPS18Q9P253 973 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 IMPACTQ9P2X3 320 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 SNX14Q9Y5W7 946 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 LRRC7Q96NW7 1537 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 TTC41PQ6P2S7 1318 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 SALL3Q9BXA9 1300 aa10.04□□□□□ -0.8
LSM5-208ENST00000450169 GLI2P10070 1586 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms