RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 API5Q9BZZ5 524 aaKnown RBP16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 COL11A2P13942 1736 aaPredicted RBP16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 GRAPQ13588 217 aa16.54■□□□□ 0.24
SNRNP27-203ENST00000450162 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
SNRNP27-203ENST00000450162 TNRC6CQ9HCJ0 1690 aaKnown RBP16.53■□□□□ 0.24
SNRNP27-203ENST00000450162 LMNB1P20700 586 aa16.53■□□□□ 0.24
SNRNP27-203ENST00000450162 UBE3BQ7Z3V4 1068 aa16.53■□□□□ 0.24
SNRNP27-203ENST00000450162 C9orf78Q9NZ63 289 aaPredicted RBP16.53■□□□□ 0.24
SNRNP27-203ENST00000450162 ABCC4O15439 1325 aa16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 GRM8O00222 908 aa16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 PPEF1O14829 653 aaPredicted RBP16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 SP8Q8IXZ3 490 aa16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 TAOK3Q9H2K8 898 aa16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 NOB1Q9ULX3 412 aaKnown RBP16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 ATP6V0A2Q9Y487 856 aa16.52■□□□□ 0.24
SNRNP27-203ENST00000450162 SLX4Q8IY92 1834 aa16.52■□□□□ 0.23
SNRNP27-203ENST00000450162 ZC3H4Q9UPT8 1303 aaKnown RBP16.51■□□□□ 0.23
SNRNP27-203ENST00000450162 NFKBIEO00221 500 aa16.51■□□□□ 0.23
SNRNP27-203ENST00000450162 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
SNRNP27-203ENST00000450162 CASP7P55210 303 aa16.51■□□□□ 0.23
SNRNP27-203ENST00000450162 CTSWP56202 376 aa16.51■□□□□ 0.23
SNRNP27-203ENST00000450162 PSMD1Q99460 953 aa16.51■□□□□ 0.23
SNRNP27-203ENST00000450162 RPS8P62241 208 aaKnown RBP16.5■□□□□ 0.23
SNRNP27-203ENST00000450162 FKBP4Q02790 459 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNRNP27-203ENST00000450162 C9orf131Q5VYM1 1079 aa16.5■□□□□ 0.23
SNRNP27-203ENST00000450162 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
SNRNP27-203ENST00000450162 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
SNRNP27-203ENST00000450162 RTL9Q8NET4 1388 aa16.5■□□□□ 0.23
SNRNP27-203ENST00000450162 UTYO14607 1347 aa16.49■□□□□ 0.23
SNRNP27-203ENST00000450162 CSF1RP07333 972 aa16.49■□□□□ 0.23
SNRNP27-203ENST00000450162 DDX60Q8IY21 1712 aaKnown RBP16.49■□□□□ 0.23
SNRNP27-203ENST00000450162 CDC5LQ99459 802 aaKnown RBP16.49■□□□□ 0.23
SNRNP27-203ENST00000450162 VPS33BQ9H267 617 aa16.49■□□□□ 0.23
SNRNP27-203ENST00000450162 HDAC5Q9UQL6 1122 aa16.49■□□□□ 0.23
SNRNP27-203ENST00000450162 RNF181Q9P0P0 153 aa16.48■□□□□ 0.23
SNRNP27-203ENST00000450162 LAMB2P55268 1798 aa16.48■□□□□ 0.23
SNRNP27-203ENST00000450162 BCAR3O75815 825 aa16.47■□□□□ 0.23
SNRNP27-203ENST00000450162 RASSF7Q02833 373 aa16.47■□□□□ 0.23
SNRNP27-203ENST00000450162 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
SNRNP27-203ENST00000450162 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
SNRNP27-203ENST00000450162 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
SNRNP27-203ENST00000450162 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
SNRNP27-203ENST00000450162 ZKSCAN2Q63HK3 967 aa16.46■□□□□ 0.23
SNRNP27-203ENST00000450162 MPNDQ8N594 471 aa16.46■□□□□ 0.23
SNRNP27-203ENST00000450162 FER1L6Q2WGJ9 1857 aa16.46■□□□□ 0.22
SNRNP27-203ENST00000450162 FOXO4P98177 505 aa16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 INTS3Q68E01 1043 aaKnown RBP16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 DPP8Q6V1X1 898 aaPredicted RBP16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 FRAT1Q92837 279 aaPredicted RBP16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 RTFDC1Q9BY42 306 aaPredicted RBP16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 USP44Q9H0E7 712 aa16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 GREM2Q9H772 168 aa16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 SEC31BQ9NQW1 1179 aa16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
SNRNP27-203ENST00000450162 NBPF7P0C2Y1 421 aaPredicted RBP16.44■□□□□ 0.22
SNRNP27-203ENST00000450162 TRIM27P14373 513 aa16.44■□□□□ 0.22
SNRNP27-203ENST00000450162 ZNF784Q8NCA9 323 aaPredicted RBP16.44■□□□□ 0.22
SNRNP27-203ENST00000450162 BSDC1Q9NW68 430 aaPredicted RBP16.44■□□□□ 0.22
SNRNP27-203ENST00000450162 ANKRD18BA2A2Z9 1011 aa16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 ITGA6P23229 1130 aa16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 IARSP41252 1262 aaKnown RBP16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 PRELPP51888 382 aa16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 JDP2Q8WYK2 163 aa16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 CCDC85AQ96PX6 553 aaPredicted RBP16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 CACNA1SQ13698 1873 aa16.43■□□□□ 0.22
SNRNP27-203ENST00000450162 SBF1O95248 1867 aa16.42■□□□□ 0.22
SNRNP27-203ENST00000450162 MS4A1P11836 297 aa16.42■□□□□ 0.22
SNRNP27-203ENST00000450162 CCDC57Q2TAC2 916 aa16.42■□□□□ 0.22
SNRNP27-203ENST00000450162 LMBR1LQ6UX01 489 aa16.42■□□□□ 0.22
SNRNP27-203ENST00000450162 ZNF277Q9NRM2 450 aaPredicted RBP16.42■□□□□ 0.22
SNRNP27-203ENST00000450162 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
SNRNP27-203ENST00000450162 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
SNRNP27-203ENST00000450162 UBTFL1P0CB47 393 aaPredicted RBP16.41■□□□□ 0.22
SNRNP27-203ENST00000450162 RABL6Q3YEC7 729 aaPredicted RBP16.41■□□□□ 0.22
SNRNP27-203ENST00000450162 SUCLG2Q96I99 432 aa16.41■□□□□ 0.22
SNRNP27-203ENST00000450162 MPHOSPH8Q99549 860 aa16.41■□□□□ 0.22
SNRNP27-203ENST00000450162 MYH3P11055 1940 aa16.41■□□□□ 0.22
SNRNP27-203ENST00000450162 GNAI3P08754 354 aa16.4■□□□□ 0.22
SNRNP27-203ENST00000450162 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
SNRNP27-203ENST00000450162 KAZALD1Q96I82 304 aa16.4■□□□□ 0.22
SNRNP27-203ENST00000450162 EYA3Q99504 573 aa16.4■□□□□ 0.22
SNRNP27-203ENST00000450162 GPBP1L1Q9HC44 474 aaPredicted RBP16.4■□□□□ 0.22
SNRNP27-203ENST00000450162 ANKIB1Q9P2G1 1089 aa16.4■□□□□ 0.22
SNRNP27-203ENST00000450162 RCAN3Q9UKA8 241 aa16.4■□□□□ 0.22
SNRNP27-203ENST00000450162 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
SNRNP27-203ENST00000450162 GLTPD2A6NH11 291 aa16.39■□□□□ 0.21
SNRNP27-203ENST00000450162 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
SNRNP27-203ENST00000450162 EPHA10Q5JZY3 1008 aa16.39■□□□□ 0.21
SNRNP27-203ENST00000450162 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
SNRNP27-203ENST00000450162 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
SNRNP27-203ENST00000450162 ANKRD2Q9GZV1 360 aa16.39■□□□□ 0.21
SNRNP27-203ENST00000450162 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms