RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 RTKN2Q8IZC4 609 aa15.24■□□□□ 0.03
LSP1P3-201ENST00000449530 JMYQ8N9B5 988 aa15.24■□□□□ 0.03
LSP1P3-201ENST00000449530 PCCAP05165 728 aaPredicted RBP15.23■□□□□ 0.03
LSP1P3-201ENST00000449530 C16orf71Q8IYS4 520 aaPredicted RBP15.23■□□□□ 0.03
LSP1P3-201ENST00000449530 DNAAF4Q8WXU2 420 aa15.23■□□□□ 0.03
LSP1P3-201ENST00000449530 NMRK2Q9NPI5 230 aa15.23■□□□□ 0.03
LSP1P3-201ENST00000449530 ZNF277Q9NRM2 450 aaPredicted RBP15.23■□□□□ 0.03
LSP1P3-201ENST00000449530 KDM2BQ8NHM5 1336 aa15.22■□□□□ 0.03
LSP1P3-201ENST00000449530 NEURL1BA8MQ27 555 aa15.22■□□□□ 0.03
LSP1P3-201ENST00000449530 HTRA3P83110 453 aa15.22■□□□□ 0.03
LSP1P3-201ENST00000449530 GRAPQ13588 217 aa15.22■□□□□ 0.03
LSP1P3-201ENST00000449530 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
LSP1P3-201ENST00000449530 RBM46Q8TBY0 533 aaKnown RBP15.22■□□□□ 0.03
LSP1P3-201ENST00000449530 GRAPLQ8TC17 118 aaPredicted RBP15.22■□□□□ 0.03
LSP1P3-201ENST00000449530 CDHR2Q9BYE9 1310 aa15.21■□□□□ 0.03
LSP1P3-201ENST00000449530 DUOX1Q9NRD9 1551 aa15.21■□□□□ 0.03
LSP1P3-201ENST00000449530 F6X3S4 739 aa15.21■□□□□ 0.03
LSP1P3-201ENST00000449530 HSP90B1P14625 803 aaKnown RBP15.21■□□□□ 0.03
LSP1P3-201ENST00000449530 SF3B3Q15393 1217 aaKnown RBP15.21■□□□□ 0.03
LSP1P3-201ENST00000449530 PSMD1Q99460 953 aa15.21■□□□□ 0.03
LSP1P3-201ENST00000449530 ATP6V0A2Q9Y487 856 aa15.21■□□□□ 0.03
LSP1P3-201ENST00000449530 COL4A5P29400 1685 aa15.21■□□□□ 0.03
LSP1P3-201ENST00000449530 WDR90Q96KV7 1748 aa15.2■□□□□ 0.02
LSP1P3-201ENST00000449530 IARSP41252 1262 aaKnown RBP15.2■□□□□ 0.02
LSP1P3-201ENST00000449530 UBE3BQ7Z3V4 1068 aa15.2■□□□□ 0.02
LSP1P3-201ENST00000449530 CELF1Q92879 486 aaKnown RBP15.2■□□□□ 0.02
LSP1P3-201ENST00000449530 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
LSP1P3-201ENST00000449530 TMX4Q9H1E5 349 aaPredicted RBP15.2■□□□□ 0.02
LSP1P3-201ENST00000449530 LTBP1Q14766 1721 aa15.2■□□□□ 0.02
LSP1P3-201ENST00000449530 PDE8AO60658 829 aa15.19■□□□□ 0.02
LSP1P3-201ENST00000449530 BBOX1O75936 387 aa15.19■□□□□ 0.02
LSP1P3-201ENST00000449530 GCKRQ14397 625 aa15.19■□□□□ 0.02
LSP1P3-201ENST00000449530 LINS1Q8NG48 757 aa15.19■□□□□ 0.02
LSP1P3-201ENST00000449530 BCL2L13Q9BXK5 485 aa15.19■□□□□ 0.02
LSP1P3-201ENST00000449530 GLTPD2A6NH11 291 aa15.18■□□□□ 0.02
LSP1P3-201ENST00000449530 CTSWP56202 376 aa15.18■□□□□ 0.02
LSP1P3-201ENST00000449530 HNRNPUQ00839 825 aaKnown RBP eCLIP15.18■□□□□ 0.02
LSP1P3-201ENST00000449530 FSTL1Q12841 308 aa15.18■□□□□ 0.02
LSP1P3-201ENST00000449530 CCDC152Q4G0S7 254 aa15.18■□□□□ 0.02
LSP1P3-201ENST00000449530 GRIPAP1Q4V328 841 aa15.18■□□□□ 0.02
LSP1P3-201ENST00000449530 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
LSP1P3-201ENST00000449530 SSH1Q8WYL5 1049 aa15.18■□□□□ 0.02
LSP1P3-201ENST00000449530 DPP8Q6V1X1 898 aaPredicted RBP15.17■□□□□ 0.02
LSP1P3-201ENST00000449530 TMC4Q7Z404 712 aa15.17■□□□□ 0.02
LSP1P3-201ENST00000449530 SP8Q8IXZ3 490 aa15.17■□□□□ 0.02
LSP1P3-201ENST00000449530 MRPL50Q8N5N7 158 aaKnown RBP15.17■□□□□ 0.02
LSP1P3-201ENST00000449530 SEC31BQ9NQW1 1179 aa15.17■□□□□ 0.02
LSP1P3-201ENST00000449530 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
LSP1P3-201ENST00000449530 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
LSP1P3-201ENST00000449530 SLC4A10Q6U841 1118 aa15.16■□□□□ 0.02
LSP1P3-201ENST00000449530 MPNDQ8N594 471 aa15.16■□□□□ 0.02
LSP1P3-201ENST00000449530 RRAGCQ9HB90 399 aa15.16■□□□□ 0.02
LSP1P3-201ENST00000449530 SMC4Q9NTJ3 1288 aa15.16■□□□□ 0.02
LSP1P3-201ENST00000449530 H7C1W4 665 aa15.15■□□□□ 0.02
LSP1P3-201ENST00000449530 PPIP5K2O43314 1243 aa15.15■□□□□ 0.02
LSP1P3-201ENST00000449530 AOC3Q16853 763 aa15.15■□□□□ 0.02
LSP1P3-201ENST00000449530 DPY19L2Q6NUT2 758 aa15.15■□□□□ 0.02
LSP1P3-201ENST00000449530 LARGE2Q8N3Y3 721 aa15.15■□□□□ 0.02
LSP1P3-201ENST00000449530 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
LSP1P3-201ENST00000449530 DDNO94850 711 aaPredicted RBP15.14■□□□□ 0.01
LSP1P3-201ENST00000449530 CASP7P55210 303 aa15.14■□□□□ 0.01
LSP1P3-201ENST00000449530 RPS8P62241 208 aaKnown RBP15.14■□□□□ 0.01
LSP1P3-201ENST00000449530 ALDH1L2Q3SY69 923 aa15.14■□□□□ 0.01
LSP1P3-201ENST00000449530 SUPT20HQ8NEM7 779 aa15.14■□□□□ 0.01
LSP1P3-201ENST00000449530 GREM2Q9H772 168 aa15.14■□□□□ 0.01
LSP1P3-201ENST00000449530 SCN4AP35499 1836 aa15.14■□□□□ 0.01
LSP1P3-201ENST00000449530 PTPRCP08575 1304 aa15.14■□□□□ 0.01
LSP1P3-201ENST00000449530 A0A1B0GUL6 1792 aa15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 RTL9Q8NET4 1388 aa15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 GPSM2P81274 684 aa15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 NIM1KQ8IY84 436 aa15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 TTLL11Q8NHH1 800 aa15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 RTFDC1Q9BY42 306 aaPredicted RBP15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 SRCIN1Q9C0H9 1055 aa15.13■□□□□ 0.01
LSP1P3-201ENST00000449530 FZD9O00144 591 aa15.12■□□□□ 0.01
LSP1P3-201ENST00000449530 ALDH1L1O75891 902 aa15.12■□□□□ 0.01
LSP1P3-201ENST00000449530 ANKRD18AQ8IVF6 992 aa15.12■□□□□ 0.01
LSP1P3-201ENST00000449530 CDC5LQ99459 802 aaKnown RBP15.12■□□□□ 0.01
LSP1P3-201ENST00000449530 PLA2G12BQ9BX93 195 aa15.12■□□□□ 0.01
LSP1P3-201ENST00000449530 NSFL1CQ9UNZ2 370 aaKnown RBP15.12■□□□□ 0.01
LSP1P3-201ENST00000449530 GRM8O00222 908 aa15.11■□□□□ 0.01
LSP1P3-201ENST00000449530 VEGFAP15692 232 aaPredicted RBP15.11■□□□□ 0.01
LSP1P3-201ENST00000449530 EIF6P56537 245 aaKnown RBP15.11■□□□□ 0.01
LSP1P3-201ENST00000449530 C9orf78Q9NZ63 289 aaPredicted RBP15.11■□□□□ 0.01
LSP1P3-201ENST00000449530 C6orf229H3BNL8 230 aa15.1■□□□□ 0.01
LSP1P3-201ENST00000449530 HSPA1AP0DMV8 641 aaKnown RBP15.1■□□□□ 0.01
LSP1P3-201ENST00000449530 HSPA1BP0DMV9 641 aaKnown RBP15.1■□□□□ 0.01
LSP1P3-201ENST00000449530 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
LSP1P3-201ENST00000449530 GPR101Q96P66 508 aaPredicted RBP15.1■□□□□ 0.01
LSP1P3-201ENST00000449530 CHMP3Q9Y3E7 222 aa15.1■□□□□ 0.01
LSP1P3-201ENST00000449530 POTECB2RU33 542 aa15.09■□□□□ 0.01
LSP1P3-201ENST00000449530 ITGA6P23229 1130 aa15.09■□□□□ 0.01
LSP1P3-201ENST00000449530 SMC1BQ8NDV3 1235 aa15.09■□□□□ 0.01
LSP1P3-201ENST00000449530 L3MBTL3Q96JM7 780 aaPredicted RBP15.09■□□□□ 0.01
LSP1P3-201ENST00000449530 VPS33BQ9H267 617 aa15.09■□□□□ 0.01
LSP1P3-201ENST00000449530 ANKIB1Q9P2G1 1089 aa15.09■□□□□ 0.01
LSP1P3-201ENST00000449530 POLLQ9UGP5 575 aa15.09■□□□□ 0.01
LSP1P3-201ENST00000449530 GJA3Q9Y6H8 435 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms