RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 KIF2AO00139 706 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-204ENST00000449510 CCDC144BQ3MJ40 725 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 LRRC8AQ8IWT6 810 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 ERO1AQ96HE7 468 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 ZCCHC17Q9NP64 241 aaKnown RBP14.39□□□□□ -0.11
UBE3B-204ENST00000449510 CEP170Q5SW79 1584 aa14.39□□□□□ -0.11
UBE3B-204ENST00000449510 PTPDC1A2A3K4 754 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 ANKRD65E5RJM6 399 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 FKBP15Q5T1M5 1219 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 UTP14CQ5TAP6 766 aaKnown RBP14.38□□□□□ -0.11
UBE3B-204ENST00000449510 FBXO38Q6PIJ6 1188 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 C11orf57Q6ZUT1 292 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-204ENST00000449510 HINFPQ9BQA5 517 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 CAPN2P17655 700 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 MICU3Q86XE3 530 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 CNNM3Q8NE01 707 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 XPO4Q9C0E2 1151 aaKnown RBP14.38□□□□□ -0.11
UBE3B-204ENST00000449510 VPS18Q9P253 973 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 HOOK1Q9UJC3 728 aaKnown RBP14.38□□□□□ -0.11
UBE3B-204ENST00000449510 CTAGE5O15320 804 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 MRPS27Q92552 414 aaKnown RBP14.38□□□□□ -0.11
UBE3B-204ENST00000449510 CENPHQ9H3R5 247 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 FANCAO15360 1455 aa14.38□□□□□ -0.11
UBE3B-204ENST00000449510 KCNQ3O43525 872 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 ZC3H6P61129 1189 aaKnown RBP14.37□□□□□ -0.11
UBE3B-204ENST00000449510 ESCO1Q5FWF5 840 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 A0A0D9SFI3 127 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 AP5Z1O43299 807 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 RAPGEF4Q8WZA2 1011 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 GDAP1L1Q96MZ0 367 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 EIF4G3O43432 1585 aaKnown RBP14.37□□□□□ -0.11
UBE3B-204ENST00000449510 MAP3K19Q56UN5 1328 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 CCP110O43303 1012 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
UBE3B-204ENST00000449510 STX17P56962 302 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
UBE3B-204ENST00000449510 IDH1O75874 414 aaKnown RBP14.36□□□□□ -0.11
UBE3B-204ENST00000449510 TSPYL1Q9H0U9 437 aa14.36□□□□□ -0.11
UBE3B-204ENST00000449510 LGR6Q9HBX8 967 aa14.36□□□□□ -0.11
UBE3B-204ENST00000449510 ATP10AO60312 1499 aa14.36□□□□□ -0.11
UBE3B-204ENST00000449510 ZSCAN12O43309 604 aa14.36□□□□□ -0.11
UBE3B-204ENST00000449510 GABPB1Q06547 395 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-204ENST00000449510 USP28Q96RU2 1077 aa14.36□□□□□ -0.11
UBE3B-204ENST00000449510 LSG1Q9H089 658 aaKnown RBP14.36□□□□□ -0.11
UBE3B-204ENST00000449510 PLEKHO1Q53GL0 409 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-204ENST00000449510 DBF4Q9UBU7 674 aaPredicted RBP14.36□□□□□ -0.11
UBE3B-204ENST00000449510 A0A087WZG4 1122 aa14.35□□□□□ -0.11
UBE3B-204ENST00000449510 LRRC59Q96AG4 307 aaKnown RBP14.35□□□□□ -0.11
UBE3B-204ENST00000449510 KLF18A0A0U1RQI7 1052 aa14.35□□□□□ -0.11
UBE3B-204ENST00000449510 EPB41L2O43491 1005 aaKnown RBP14.35□□□□□ -0.11
UBE3B-204ENST00000449510 SYKP43405 635 aa14.35□□□□□ -0.11
UBE3B-204ENST00000449510 RUFY1Q96T51 708 aa14.35□□□□□ -0.11
UBE3B-204ENST00000449510 CBFA2T2O43439 604 aa14.35□□□□□ -0.11
UBE3B-204ENST00000449510 ZNF853P0CG23 659 aa14.35□□□□□ -0.11
UBE3B-204ENST00000449510 KMT5BQ4FZB7 885 aa14.35□□□□□ -0.11
UBE3B-204ENST00000449510 ZSCAN16Q9H4T2 348 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-204ENST00000449510 U3KPZ7 1027 aaPredicted RBP14.35□□□□□ -0.11
UBE3B-204ENST00000449510 IFIT1P09914 478 aaKnown RBP14.34□□□□□ -0.11
UBE3B-204ENST00000449510 RPS6KB1P23443 525 aa14.34□□□□□ -0.11
UBE3B-204ENST00000449510 TIMM10P62072 90 aa14.34□□□□□ -0.11
UBE3B-204ENST00000449510 DNAJC21Q5F1R6 531 aaKnown RBP14.34□□□□□ -0.11
UBE3B-204ENST00000449510 GPIHBP1Q8IV16 184 aa14.34□□□□□ -0.11
UBE3B-204ENST00000449510 JMYQ8N9B5 988 aa14.34□□□□□ -0.11
UBE3B-204ENST00000449510 MATR3P43243 847 aaKnown RBP eCLIP14.34□□□□□ -0.11
UBE3B-204ENST00000449510 TTC39AQ5SRH9 613 aa14.34□□□□□ -0.11
UBE3B-204ENST00000449510 DESI2Q9BSY9 194 aa14.34□□□□□ -0.11
UBE3B-204ENST00000449510 BICC1Q9H694 974 aaKnown RBP14.34□□□□□ -0.11
UBE3B-204ENST00000449510 ANKRD20A12PQ8NF67 263 aa14.34□□□□□ -0.11
UBE3B-204ENST00000449510 TRPM1Q7Z4N2 1603 aa14.34□□□□□ -0.11
UBE3B-204ENST00000449510 ERLIN1O75477 346 aa14.33□□□□□ -0.11
UBE3B-204ENST00000449510 AFMP43652 599 aa14.33□□□□□ -0.11
UBE3B-204ENST00000449510 FILIP1LQ4L180 1135 aa14.33□□□□□ -0.11
UBE3B-204ENST00000449510 TLR7Q9NYK1 1049 aaKnown RBP14.33□□□□□ -0.11
UBE3B-204ENST00000449510 RGS12O14924 1447 aa14.33□□□□□ -0.11
UBE3B-204ENST00000449510 PIK3R4Q99570 1358 aa14.33□□□□□ -0.12
UBE3B-204ENST00000449510 SPTLC2O15270 562 aa14.33□□□□□ -0.12
UBE3B-204ENST00000449510 LONRF3Q496Y0 759 aa14.33□□□□□ -0.12
UBE3B-204ENST00000449510 SLFNL1Q499Z3 407 aa14.33□□□□□ -0.12
UBE3B-204ENST00000449510 EAF2Q96CJ1 260 aaPredicted RBP14.33□□□□□ -0.12
UBE3B-204ENST00000449510 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
UBE3B-204ENST00000449510 EIF3JO75822 258 aaKnown RBP14.33□□□□□ -0.12
UBE3B-204ENST00000449510 TERF2Q15554 542 aa14.33□□□□□ -0.12
UBE3B-204ENST00000449510 ACBD3Q9H3P7 528 aa14.33□□□□□ -0.12
UBE3B-204ENST00000449510 NCOA3Q9Y6Q9 1424 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 KIF5CO60282 957 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 OAS2P29728 719 aaKnown RBP14.32□□□□□ -0.12
UBE3B-204ENST00000449510 CEBPAP49715 358 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-204ENST00000449510 CCDC150Q8NCX0 1101 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 FAM107BQ9H098 131 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 DEF6Q9H4E7 631 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 GRM8O00222 908 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 ADKP55263 362 aaKnown RBP14.32□□□□□ -0.12
UBE3B-204ENST00000449510 HNRNPH2P55795 449 aaKnown RBP14.32□□□□□ -0.12
UBE3B-204ENST00000449510 SETQ01105 290 aaPredicted RBP14.32□□□□□ -0.12
UBE3B-204ENST00000449510 FAM160A1Q05DH4 1040 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 COPS6Q7L5N1 327 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 GJB4Q9NTQ9 266 aa14.32□□□□□ -0.12
UBE3B-204ENST00000449510 CEP126Q9P2H0 1117 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms