RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ATP2B1P20020 1258 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 EMILIN1Q9Y6C2 1016 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 IL13P35225 146 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 NBPF11Q86T75 865 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 GPR161Q8N6U8 529 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 ANKRD26Q9UPS8 1709 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 EIF3CLB5ME19 914 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 ZKSCAN1P17029 563 aaPredicted RBP10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 ARMCX5Q6P1M9 558 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 EIF3CQ99613 913 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 TM6SF1Q9BZW5 370 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 NAT10Q9H0A0 1025 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 CEBPZQ03701 1054 aaKnown RBP10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 PPM1EQ8WY54 764 aa10.98□□□□□ -0.65
SYNPO2-204ENST00000448416 ABCC1P33527 1531 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 RAB11FIP3O75154 756 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 BRD2P25440 801 aaKnown RBP10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 E2F4Q16254 413 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 FUT8Q9BYC5 575 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 VPS18Q9P253 973 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 CDK12Q9NYV4 1490 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 CHL1O00533 1208 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 PRR29P0C7W0 189 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 KCNJ6P48051 423 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 RUFY2Q8WXA3 655 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 PTH1RQ03431 593 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 XPO4Q9C0E2 1151 aaKnown RBP10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 TTC41PQ6P2S7 1318 aa10.97□□□□□ -0.65
SYNPO2-204ENST00000448416 H3BQF6 201 aa10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 KINO60870 393 aaKnown RBP10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 CCDC73Q6ZRK6 1079 aa10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 IFNKQ9P0W0 207 aa10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 DLG5Q8TDM6 1919 aa10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 YTHDC2Q9H6S0 1430 aaKnown RBP10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 CCAR1Q8IX12 1150 aaKnown RBP10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 BANK1Q8NDB2 785 aa10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 PARD6BQ9BYG5 372 aa10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 CABP1Q9NZU7 370 aa10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 CFAP45Q9UL16 551 aa10.96□□□□□ -0.65
SYNPO2-204ENST00000448416 CD163L1Q9NR16 1453 aa10.96□□□□□ -0.66
SYNPO2-204ENST00000448416 ABCA9Q8IUA7 1624 aa10.96□□□□□ -0.66
SYNPO2-204ENST00000448416 DHX8Q14562 1220 aaKnown RBP10.96□□□□□ -0.66
SYNPO2-204ENST00000448416 CCDC91Q7Z6B0 441 aa10.96□□□□□ -0.66
SYNPO2-204ENST00000448416 PI4K2BQ8TCG2 481 aa10.96□□□□□ -0.66
SYNPO2-204ENST00000448416 ADGRB3O60242 1522 aa10.96□□□□□ -0.66
SYNPO2-204ENST00000448416 ZRSR1Q15695 479 aaKnown RBP10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 FOXR1Q6PIV2 292 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 MCM10Q7L590 875 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 PARP3Q9Y6F1 533 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 SURF6O75683 361 aaKnown RBP10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 IFIT2P09913 472 aaKnown RBP10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 STK3Q13188 491 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 LONRF2Q1L5Z9 754 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 RPGRIP1LQ68CZ1 1315 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 TRIM65Q6PJ69 517 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 ZFYVE16Q7Z3T8 1539 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 ANKRD65E5RJM6 399 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 TSGA10IPQ3SY00 556 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 CT47A1Q5JQC4 288 aaPredicted RBP10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 ERCC4Q92889 916 aaPredicted RBP10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 TCEANC2Q96MN5 208 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 H3BQV1 296 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 IFFO2Q5TF58 517 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 ZNF622Q969S3 477 aaKnown RBP eCLIP10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 PRAM1Q96QH2 718 aa10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
SYNPO2-204ENST00000448416 CCDC172P0C7W6 258 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 MCM6Q14566 821 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 DDX11Q96FC9 970 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 CEP83Q9Y592 693 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 ABCC3O15438 1527 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 CFAP65Q6ZU64 1925 aaKnown RBP10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 PPP2R3AQ06190 1150 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 FMNL2Q96PY5 1086 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 PSMA5P28066 241 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 CORO7P57737 925 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 PDE11AQ9HCR9 933 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 MIS18AQ9NYP9 233 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 PPLO60437 1756 aa10.94□□□□□ -0.66
SYNPO2-204ENST00000448416 SOS1Q07889 1333 aaPredicted RBP10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 GIGYF1O75420 1035 aaPredicted RBP10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 JAKMIP3Q5VZ66 844 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 RABGGTAQ92696 567 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 ADGRL3Q9HAR2 1447 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 ANKRD1Q15327 319 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 EP400NLQ6ZTU2 488 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 RHPN1Q8TCX5 695 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 UTP14AQ9BVJ6 771 aaKnown RBP10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 STK31Q9BXU1 1019 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 CXorf56Q9H5V9 222 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 EFCAB6Q5THR3 1501 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 APOBRQ0VD83 1088 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 MCTP2Q6DN12 878 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 BLOC1S2Q6QNY1 142 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 MPHOSPH8Q99549 860 aa10.93□□□□□ -0.66
SYNPO2-204ENST00000448416 SDF4Q9BRK5 362 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms