RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PI4KAP1Q8N8J0 262 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 GTPBP4Q9BZE4 634 aaKnown RBP8.91□□□□□ -0.98
NEDD9-204ENST00000448183 LRRC27Q9C0I9 530 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 DNAI2Q9GZS0 605 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 TMOD3Q9NYL9 352 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 RSPH14Q9UHP6 348 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 TRMT112Q9UI30 125 aaKnown RBP8.91□□□□□ -0.98
NEDD9-204ENST00000448183 MAP3K2Q9Y2U5 619 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 KLF18A0A0U1RQI7 1052 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 PPFIA3O75145 1194 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 RAPGEF3O95398 923 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 NBPF7P0C2Y1 421 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-204ENST00000448183 MFSD6Q6ZSS7 791 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 AOPEPQ8N6M6 819 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 SNRKQ9NRH2 765 aa8.91□□□□□ -0.98
NEDD9-204ENST00000448183 SCAF11Q99590 1463 aaKnown RBP8.9□□□□□ -0.98
NEDD9-204ENST00000448183 KIAA0753Q2KHM9 967 aa8.9□□□□□ -0.98
NEDD9-204ENST00000448183 CUL5Q93034 780 aa8.9□□□□□ -0.98
NEDD9-204ENST00000448183 SYT1P21579 422 aa8.9□□□□□ -0.98
NEDD9-204ENST00000448183 TUBB4BP68371 445 aa8.9□□□□□ -0.98
NEDD9-204ENST00000448183 DNM1Q05193 864 aaKnown RBP8.9□□□□□ -0.98
NEDD9-204ENST00000448183 C6orf163Q5TEZ5 329 aa8.9□□□□□ -0.98
NEDD9-204ENST00000448183 SPTY2D1Q68D10 685 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-204ENST00000448183 PPP4R3AQ6IN85 833 aa8.9□□□□□ -0.98
NEDD9-204ENST00000448183 RBM8AQ9Y5S9 174 aaKnown RBP8.9□□□□□ -0.98
NEDD9-204ENST00000448183 NPHP3Q7Z494 1330 aa8.9□□□□□ -0.98
NEDD9-204ENST00000448183 TYRO3Q06418 890 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 STXBP4Q6ZWJ1 553 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC155Q8N6L0 562 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 MEIS3Q99687 375 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC94Q9BW85 323 aaPredicted RBP8.9□□□□□ -0.99
NEDD9-204ENST00000448183 ABCC5O15440 1437 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 POGZQ7Z3K3 1410 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 ADGRF5Q8IZF2 1346 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 CDK13Q14004 1512 aaKnown RBP8.9□□□□□ -0.99
NEDD9-204ENST00000448183 OPA1O60313 960 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 RRAGBQ5VZM2 374 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 LDHAL6AQ6ZMR3 332 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 RAB11FIP4Q86YS3 637 aa8.9□□□□□ -0.99
NEDD9-204ENST00000448183 UBE3BQ7Z3V4 1068 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 FBF1Q8TES7 1133 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 GOLGA1Q92805 767 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 ZFP91Q96JP5 570 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-204ENST00000448183 TCEANC2Q96MN5 208 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 SPAG5Q96R06 1193 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 WASLO00401 505 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-204ENST00000448183 CAPN2P17655 700 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 ALG1Q9BT22 464 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 PLVAPQ9BX97 442 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 EXOC1Q9NV70 894 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 ZBTB43O43298 467 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 ZFYP08048 801 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-204ENST00000448183 CCDC172P0C7W6 258 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 PIP4K2BP78356 416 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 ATRIPQ8WXE1 791 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 CEP63Q96MT8 703 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 HOMER2Q9NSB8 354 aa8.89□□□□□ -0.99
NEDD9-204ENST00000448183 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.89□□□□□ -0.995e-7■■■□□ 17.2
NEDD9-204ENST00000448183 V9GYY5 206 aaPredicted RBP8.89□□□□□ -0.99
NEDD9-204ENST00000448183 PCF11O94913 1555 aaKnown RBP8.89□□□□□ -0.99
NEDD9-204ENST00000448183 FAM83GA6ND36 823 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 TSPY2A6NKD2 308 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 PRC1O43663 620 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 TACC1O75410 805 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 GTF2A1P52655 376 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-204ENST00000448183 PDE4BQ07343 736 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 DDX12PQ92771 950 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 TTC21AQ8NDW8 1320 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 CTAGE9A4FU28 777 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 ATP2C2O75185 946 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 LMOD1P29536 600 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-204ENST00000448183 DDX46Q7L014 1031 aaKnown RBP8.88□□□□□ -0.99
NEDD9-204ENST00000448183 SLF2Q8IX21 1173 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 NSRP1Q9H0G5 558 aaKnown RBP8.88□□□□□ -0.99
NEDD9-204ENST00000448183 KAT14Q9H8E8 782 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 CAMSAP2Q08AD1 1489 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 TUBBP07437 444 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 AFMP43652 599 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 FEZ1Q99689 392 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 ZBTB3Q9H5J0 574 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 EHMT1Q9H9B1 1298 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 CWC25Q9NXE8 425 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-204ENST00000448183 ANKRD36BQ8N2N9 1353 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 DISP3Q9P2K9 1392 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 RALGAPBQ86X10 1494 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 PSMA7O14818 248 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 WTAPQ15007 396 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 HSP90AA4PQ58FG1 418 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 TMTC2Q8N394 836 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 ANKRD24Q8TF21 1146 aa8.88□□□□□ -0.99
NEDD9-204ENST00000448183 INTS4Q96HW7 963 aaKnown RBP8.88□□□□□ -0.99
NEDD9-204ENST00000448183 EBAG9O00559 213 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 LDHCP07864 332 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 SELENOOQ9BVL4 669 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 LRRC2Q9BYS8 371 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 SPTLC2O15270 562 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 KRT86O43790 486 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 PTGS1P23219 599 aa8.87□□□□□ -0.99
NEDD9-204ENST00000448183 KRT83P78385 493 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms