RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ST5P78524 1137 aa24.26■■□□□ 1.47
SGCE-207ENST00000447873 R3HDM1Q15032 1099 aaKnown RBP24.26■■□□□ 1.47
SGCE-207ENST00000447873 CASZ1Q86V15 1759 aa24.25■■□□□ 1.47
SGCE-207ENST00000447873 CCDC57Q2TAC2 916 aa24.25■■□□□ 1.47
SGCE-207ENST00000447873 NLRP3Q96P20 1036 aa24.25■■□□□ 1.47
SGCE-207ENST00000447873 SURF6O75683 361 aaKnown RBP24.25■■□□□ 1.47
SGCE-207ENST00000447873 FAM161AQ3B820 660 aa24.25■■□□□ 1.47
SGCE-207ENST00000447873 CCDC152Q4G0S7 254 aa24.25■■□□□ 1.47
SGCE-207ENST00000447873 IFIT5Q13325 482 aaKnown RBP24.24■■□□□ 1.47
SGCE-207ENST00000447873 GREM2Q9H772 168 aa24.24■■□□□ 1.47
SGCE-207ENST00000447873 EXOC6BQ9Y2D4 811 aa24.24■■□□□ 1.47
SGCE-207ENST00000447873 NRXN2Q9P2S2 1712 aa24.23■■□□□ 1.47
SGCE-207ENST00000447873 RFX5P48382 616 aaPredicted RBP24.23■■□□□ 1.47
SGCE-207ENST00000447873 ITGA6P23229 1130 aa24.22■■□□□ 1.47
SGCE-207ENST00000447873 KLHDC4Q8TBB5 520 aa24.22■■□□□ 1.47
SGCE-207ENST00000447873 COPRSQ9NQ92 184 aa24.22■■□□□ 1.47
SGCE-207ENST00000447873 PA2G4Q9UQ80 394 aaKnown RBP24.22■■□□□ 1.47
SGCE-207ENST00000447873 ANKRD18BA2A2Z9 1011 aa24.21■■□□□ 1.47
SGCE-207ENST00000447873 SF3B3Q15393 1217 aaKnown RBP24.21■■□□□ 1.47
SGCE-207ENST00000447873 HSP90AB4PQ58FF6 505 aa24.21■■□□□ 1.47
SGCE-207ENST00000447873 C3orf67Q6ZVT6 689 aa24.21■■□□□ 1.47
SGCE-207ENST00000447873 NOP58Q9Y2X3 529 aaKnown RBP24.21■■□□□ 1.47
SGCE-207ENST00000447873 RIC1Q4ADV7 1423 aa24.21■■□□□ 1.47
SGCE-207ENST00000447873 APBB1O00213 710 aa24.2■■□□□ 1.47
SGCE-207ENST00000447873 PTPN12Q05209 780 aaKnown RBP24.2■■□□□ 1.47
SGCE-207ENST00000447873 OS9Q13438 667 aaPredicted RBP24.2■■□□□ 1.47
SGCE-207ENST00000447873 TAF7LQ5H9L4 462 aa24.2■■□□□ 1.47
SGCE-207ENST00000447873 TNRC6CQ9HCJ0 1690 aaKnown RBP24.2■■□□□ 1.47
SGCE-207ENST00000447873 PSDA5PKW4 1024 aaPredicted RBP24.2■■□□□ 1.46
SGCE-207ENST00000447873 G3BP1Q13283 466 aaKnown RBP eCLIP24.2■■□□□ 1.46
SGCE-207ENST00000447873 ANKRD45Q5TZF3 282 aa24.2■■□□□ 1.46
SGCE-207ENST00000447873 SIL1Q9H173 461 aa24.2■■□□□ 1.46
SGCE-207ENST00000447873 RTL9Q8NET4 1388 aa24.19■■□□□ 1.46
SGCE-207ENST00000447873 ZBTB7AO95365 584 aa24.19■■□□□ 1.46
SGCE-207ENST00000447873 ZBTB47Q9UFB7 747 aaPredicted RBP24.19■■□□□ 1.46
SGCE-207ENST00000447873 RAB11FIP3O75154 756 aa24.18■■□□□ 1.46
SGCE-207ENST00000447873 ZNF594Q96JF6 807 aaPredicted RBP24.18■■□□□ 1.46
SGCE-207ENST00000447873 PDZRN3Q9UPQ7 1066 aa24.18■■□□□ 1.46
SGCE-207ENST00000447873 BRIP1Q9BX63 1249 aa24.17■■□□□ 1.46
SGCE-207ENST00000447873 MTFR1LQ9H019 292 aa24.17■■□□□ 1.46
SGCE-207ENST00000447873 NUCB1Q02818 461 aa24.16■■□□□ 1.46
SGCE-207ENST00000447873 ERC1Q8IUD2 1116 aa24.16■■□□□ 1.46
SGCE-207ENST00000447873 LRRCC1Q9C099 1032 aa24.16■■□□□ 1.46
SGCE-207ENST00000447873 SEC31BQ9NQW1 1179 aa24.16■■□□□ 1.46
SGCE-207ENST00000447873 ANKRD31Q8N7Z5 1873 aa24.15■■□□□ 1.46
SGCE-207ENST00000447873 CHD1LQ86WJ1 897 aa24.15■■□□□ 1.46
SGCE-207ENST00000447873 DDX46Q7L014 1031 aaKnown RBP24.14■■□□□ 1.45
SGCE-207ENST00000447873 KIF1BPQ96EK5 621 aa24.14■■□□□ 1.45
SGCE-207ENST00000447873 CDC5LQ99459 802 aaKnown RBP24.14■■□□□ 1.45
SGCE-207ENST00000447873 LNPKQ9C0E8 428 aa24.14■■□□□ 1.45
SGCE-207ENST00000447873 BCL11AQ9H165 835 aa24.14■■□□□ 1.45
SGCE-207ENST00000447873 FBXO3Q9UK99 471 aa24.14■■□□□ 1.45
SGCE-207ENST00000447873 ATF5Q9Y2D1 282 aaPredicted RBP24.14■■□□□ 1.45
SGCE-207ENST00000447873 TAF1P21675 1872 aa24.13■■□□□ 1.45
SGCE-207ENST00000447873 EYA2O00167 538 aa24.13■■□□□ 1.45
SGCE-207ENST00000447873 CIAO1O76071 339 aa24.13■■□□□ 1.45
SGCE-207ENST00000447873 POLD1P28340 1107 aa24.13■■□□□ 1.45
SGCE-207ENST00000447873 PDE6BP35913 854 aa24.13■■□□□ 1.45
SGCE-207ENST00000447873 IGHMBP2P38935 993 aaKnown RBP24.13■■□□□ 1.45
SGCE-207ENST00000447873 LDHAL6AQ6ZMR3 332 aa24.13■■□□□ 1.45
SGCE-207ENST00000447873 RHPN1Q8TCX5 695 aa24.13■■□□□ 1.45
SGCE-207ENST00000447873 RPGRQ92834 1020 aaKnown RBP24.13■■□□□ 1.45
SGCE-207ENST00000447873 SPEF2Q9C093 1822 aa24.13■■□□□ 1.45
SGCE-207ENST00000447873 SMARCA5O60264 1052 aaPredicted RBP24.12■■□□□ 1.45
SGCE-207ENST00000447873 CRY2Q49AN0 593 aa24.12■■□□□ 1.45
SGCE-207ENST00000447873 MPHOSPH8Q99549 860 aa24.12■■□□□ 1.45
SGCE-207ENST00000447873 KLRG2A4D1S0 409 aaPredicted RBP24.12■■□□□ 1.45
SGCE-207ENST00000447873 IL15P40933 162 aaPredicted RBP24.12■■□□□ 1.45
SGCE-207ENST00000447873 LRRC24Q50LG9 513 aa24.12■■□□□ 1.45
SGCE-207ENST00000447873 PUS3Q9BZE2 481 aaKnown RBP24.12■■□□□ 1.45
SGCE-207ENST00000447873 CNNM1Q9NRU3 951 aa24.12■■□□□ 1.45
SGCE-207ENST00000447873 ATG9AQ7Z3C6 839 aa24.11■■□□□ 1.45
SGCE-207ENST00000447873 ANKRD18AQ8IVF6 992 aa24.11■■□□□ 1.45
SGCE-207ENST00000447873 SASH1O94885 1247 aa24.1■■□□□ 1.45
SGCE-207ENST00000447873 IL1RAPL2Q9NP60 686 aa24.1■■□□□ 1.45
SGCE-207ENST00000447873 SKAP1Q86WV1 359 aa24.09■■□□□ 1.45
SGCE-207ENST00000447873 RBM17Q96I25 401 aaKnown RBP24.09■■□□□ 1.45
SGCE-207ENST00000447873 LRP5O75197 1615 aa24.09■■□□□ 1.45
SGCE-207ENST00000447873 RPS8P62241 208 aaKnown RBP24.08■■□□□ 1.45
SGCE-207ENST00000447873 CELF1Q92879 486 aaKnown RBP24.08■■□□□ 1.45
SGCE-207ENST00000447873 RIPOR2Q9Y4F9 1068 aa24.08■■□□□ 1.44
SGCE-207ENST00000447873 COL4A1P02462 1669 aa24.07■■□□□ 1.44
SGCE-207ENST00000447873 HOXA10P31260 410 aaPredicted RBP24.07■■□□□ 1.44
SGCE-207ENST00000447873 RGS3P49796 1198 aa24.07■■□□□ 1.44
SGCE-207ENST00000447873 TFCP2Q12800 502 aa24.07■■□□□ 1.44
SGCE-207ENST00000447873 GRAPQ13588 217 aa24.07■■□□□ 1.44
SGCE-207ENST00000447873 CLASRPQ8N2M8 674 aaKnown RBP24.07■■□□□ 1.44
SGCE-207ENST00000447873 GRAPLQ8TC17 118 aaPredicted RBP24.07■■□□□ 1.44
SGCE-207ENST00000447873 C10orf71Q711Q0 1435 aa24.06■■□□□ 1.44
SGCE-207ENST00000447873 SRGNP10124 158 aa24.06■■□□□ 1.44
SGCE-207ENST00000447873 CEP126Q9P2H0 1117 aa24.06■■□□□ 1.44
SGCE-207ENST00000447873 H0YIN7 160 aa24.05■■□□□ 1.44
SGCE-207ENST00000447873 NPR1P16066 1061 aa24.05■■□□□ 1.44
SGCE-207ENST00000447873 PDE4AP27815 886 aa24.05■■□□□ 1.44
SGCE-207ENST00000447873 METTL24Q5JXM2 366 aa24.05■■□□□ 1.44
SGCE-207ENST00000447873 C2CD5Q86YS7 1000 aa24.05■■□□□ 1.44
SGCE-207ENST00000447873 BSDC1Q9NW68 430 aaPredicted RBP24.05■■□□□ 1.44
SGCE-207ENST00000447873 COL11A2P13942 1736 aaPredicted RBP24.05■■□□□ 1.44
SGCE-207ENST00000447873 MROH5Q6ZUA9 1318 aa24.05■■□□□ 1.44
SGCE-207ENST00000447873 C16orf71Q8IYS4 520 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms