RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 LAMB4A4D0S4 1761 aa13.74□□□□□ -0.21
GNE-203ENST00000447283 RPAP1Q9BWH6 1393 aaPredicted RBP13.74□□□□□ -0.21
GNE-203ENST00000447283 SGSM2O43147 1006 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 NEXNQ0ZGT2 675 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 POTEAQ6S8J7 498 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 USP48Q86UV5 1035 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 RNF214Q8ND24 703 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 PLBD2Q8NHP8 589 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 TTC14Q96N46 770 aa13.73□□□□□ -0.21
GNE-203ENST00000447283 R3HCC1Q9Y3T6 440 aaKnown RBP13.73□□□□□ -0.21
GNE-203ENST00000447283 GADD45BO75293 160 aaPredicted RBP13.72□□□□□ -0.21
GNE-203ENST00000447283 ITPK1Q13572 414 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 UVSSAQ2YD98 709 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 PPP1R42Q7Z4L9 355 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 LINS1Q8NG48 757 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 KIF1BPQ96EK5 621 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
GNE-203ENST00000447283 SURF6O75683 361 aaKnown RBP13.72□□□□□ -0.21
GNE-203ENST00000447283 ALDH1L1O75891 902 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 METTL22Q9BUU2 404 aaPredicted RBP13.72□□□□□ -0.21
GNE-203ENST00000447283 SNX14Q9Y5W7 946 aa13.72□□□□□ -0.21
GNE-203ENST00000447283 USP42Q9H9J4 1324 aaKnown RBP13.71□□□□□ -0.21
GNE-203ENST00000447283 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.21
GNE-203ENST00000447283 LSG1Q9H089 658 aaKnown RBP13.71□□□□□ -0.21
GNE-203ENST00000447283 ZBTB1Q9Y2K1 713 aa13.71□□□□□ -0.21
GNE-203ENST00000447283 CRKLP46109 303 aaKnown RBP13.71□□□□□ -0.22
GNE-203ENST00000447283 CNTROBQ8N137 903 aa13.71□□□□□ -0.22
GNE-203ENST00000447283 CCDC87Q9NVE4 849 aa13.71□□□□□ -0.22
GNE-203ENST00000447283 NHSQ6T4R5 1651 aa13.7□□□□□ -0.22
GNE-203ENST00000447283 ZSCAN22P10073 491 aaPredicted RBP13.7□□□□□ -0.22
GNE-203ENST00000447283 CCDC183Q5T5S1 534 aa13.7□□□□□ -0.22
GNE-203ENST00000447283 INTS5Q6P9B9 1019 aaKnown RBP13.7□□□□□ -0.22
GNE-203ENST00000447283 GDPD2Q9HCC8 539 aa13.7□□□□□ -0.22
GNE-203ENST00000447283 TRIM37O94972 964 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 LETM1O95202 739 aaPredicted RBP13.69□□□□□ -0.22
GNE-203ENST00000447283 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
GNE-203ENST00000447283 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 MYD88Q99836 296 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 LIMCH1Q9UPQ0 1083 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 IGKV5-2P06315 115 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 AK2P54819 239 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 KIF6Q6ZMV9 814 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 MAP7D2Q96T17 732 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
GNE-203ENST00000447283 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
GNE-203ENST00000447283 CCNL1Q9UK58 526 aaPredicted RBP13.69□□□□□ -0.22
GNE-203ENST00000447283 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
GNE-203ENST00000447283 TTC41PQ6P2S7 1318 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 BRWD3Q6RI45 1802 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 KCNQ4P56696 695 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 RUFY3Q7L099 469 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 UQCRHLA0A096LP55 91 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 STX6O43752 255 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 MAP4K4O95819 1239 aaPredicted RBP13.68□□□□□ -0.22
GNE-203ENST00000447283 UQCRHP07919 91 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 EIF5P55010 431 aaKnown RBP13.68□□□□□ -0.22
GNE-203ENST00000447283 UBE2HP62256 183 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 SASS6Q6UVJ0 657 aa13.68□□□□□ -0.22
GNE-203ENST00000447283 BTAF1O14981 1849 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 SBF2Q86WG5 1849 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 NEURL1BA8MQ27 555 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 PTMAP06454 111 aaKnown RBP13.67□□□□□ -0.22
GNE-203ENST00000447283 NBPF7P0C2Y1 421 aaPredicted RBP13.67□□□□□ -0.22
GNE-203ENST00000447283 SYT1P21579 422 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 KIAA2012Q0VF49 1180 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 FOXD4L6Q3SYB3 417 aaPredicted RBP13.67□□□□□ -0.22
GNE-203ENST00000447283 FOXD4L3Q6VB84 417 aaPredicted RBP13.67□□□□□ -0.22
GNE-203ENST00000447283 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 HDAC5Q9UQL6 1122 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.67□□□□□ -0.22
GNE-203ENST00000447283 TJP1Q07157 1748 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 EP400Q96L91 3159 aa13.67□□□□□ -0.22
GNE-203ENST00000447283 ATP5J2-PTCD1G3V325 749 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 F13A1P00488 732 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 MTX1Q13505 466 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 GCKRQ14397 625 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 GRM8O00222 908 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 GLRX3O76003 335 aaKnown RBP13.66□□□□□ -0.22
GNE-203ENST00000447283 RC3H1Q5TC82 1133 aaKnown RBP13.66□□□□□ -0.22
GNE-203ENST00000447283 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
GNE-203ENST00000447283 KCNB2Q92953 911 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 PODXL2Q9NZ53 605 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 SMC3Q9UQE7 1217 aa13.66□□□□□ -0.22
GNE-203ENST00000447283 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
GNE-203ENST00000447283 TCIRG1Q13488 830 aa13.65□□□□□ -0.22
GNE-203ENST00000447283 RUFY2Q8WXA3 655 aa13.65□□□□□ -0.22
GNE-203ENST00000447283 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
GNE-203ENST00000447283 CNTNAP4Q9C0A0 1308 aa13.65□□□□□ -0.22
GNE-203ENST00000447283 ZNF831Q5JPB2 1677 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms