RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TRMT112Q9UI30 125 aaKnown RBP31.95■■■□□ 2.71
PMS1-214ENST00000446877 XAGE3Q8WTP9 111 aa31.94■■■□□ 2.7
PMS1-214ENST00000446877 NECTIN2Q92692 538 aa31.94■■■□□ 2.7
PMS1-214ENST00000446877 CELF2O95319 508 aaKnown RBP31.93■■■□□ 2.7
PMS1-214ENST00000446877 MAP2K2P36507 400 aa31.93■■■□□ 2.7
PMS1-214ENST00000446877 KIAA2012Q0VF49 1180 aa31.93■■■□□ 2.7
PMS1-214ENST00000446877 RAD17O75943 681 aa31.92■■■□□ 2.7
PMS1-214ENST00000446877 TCIRG1Q13488 830 aa31.92■■■□□ 2.7
PMS1-214ENST00000446877 SH3TC1Q8TE82 1336 aa31.92■■■□□ 2.7
PMS1-214ENST00000446877 GRAPQ13588 217 aa31.91■■■□□ 2.7
PMS1-214ENST00000446877 GRAPLQ8TC17 118 aaPredicted RBP31.91■■■□□ 2.7
PMS1-214ENST00000446877 GLIS2Q9BZE0 524 aaPredicted RBP31.91■■■□□ 2.7
PMS1-214ENST00000446877 CDHR2Q9BYE9 1310 aa31.91■■■□□ 2.7
PMS1-214ENST00000446877 TMPOP42166 694 aaKnown RBP31.9■■■□□ 2.7
PMS1-214ENST00000446877 SAPCD2Q86UD0 394 aa31.9■■■□□ 2.7
PMS1-214ENST00000446877 ZC3H15Q8WU90 426 aaKnown RBP31.9■■■□□ 2.7
PMS1-214ENST00000446877 AOC2O75106 756 aa31.89■■■□□ 2.7
PMS1-214ENST00000446877 TMC4Q7Z404 712 aa31.89■■■□□ 2.7
PMS1-214ENST00000446877 PGAP2Q9UHJ9 254 aa31.89■■■□□ 2.7
PMS1-214ENST00000446877 H7C1D1 291 aa31.87■■■□□ 2.69
PMS1-214ENST00000446877 CDC37L1Q7L3B6 337 aa31.87■■■□□ 2.69
PMS1-214ENST00000446877 ZNF408Q9H9D4 720 aa31.87■■■□□ 2.69
PMS1-214ENST00000446877 CA12O43570 354 aa31.86■■■□□ 2.69
PMS1-214ENST00000446877 HHIPL1Q96JK4 782 aa31.86■■■□□ 2.69
PMS1-214ENST00000446877 CNOT7Q9UIV1 285 aaKnown RBP31.86■■■□□ 2.69
PMS1-214ENST00000446877 HIRAP54198 1017 aaPredicted RBP31.84■■■□□ 2.69
PMS1-214ENST00000446877 RALBP1Q15311 655 aa31.84■■■□□ 2.69
PMS1-214ENST00000446877 TSKSQ9UJT2 592 aa31.84■■■□□ 2.69
PMS1-214ENST00000446877 CCDC85CA6NKD9 419 aa31.83■■■□□ 2.69
PMS1-214ENST00000446877 NEUROD2Q15784 382 aa31.83■■■□□ 2.69
PMS1-214ENST00000446877 LAS1LQ9Y4W2 734 aaKnown RBP31.83■■■□□ 2.69
PMS1-214ENST00000446877 TRPM4Q8TD43 1214 aa31.82■■■□□ 2.68
PMS1-214ENST00000446877 CHL1O00533 1208 aa31.81■■■□□ 2.68
PMS1-214ENST00000446877 WASHC4Q2M389 1173 aa31.81■■■□□ 2.68
PMS1-214ENST00000446877 ZNF428Q96B54 188 aa31.81■■■□□ 2.68
PMS1-214ENST00000446877 NSFL1CQ9UNZ2 370 aaKnown RBP31.81■■■□□ 2.68
PMS1-214ENST00000446877 YDJCA8MPS7 323 aa31.8■■■□□ 2.68
PMS1-214ENST00000446877 BRPF1P55201 1214 aaPredicted RBP31.8■■■□□ 2.68
PMS1-214ENST00000446877 MICALL2Q8IY33 904 aa31.8■■■□□ 2.68
PMS1-214ENST00000446877 CHPF2Q9P2E5 772 aa31.8■■■□□ 2.68
PMS1-214ENST00000446877 THSD7BQ9C0I4 1608 aa31.79■■■□□ 2.68
PMS1-214ENST00000446877 KRT24Q2M2I5 525 aa31.79■■■□□ 2.68
PMS1-214ENST00000446877 FAM161AQ3B820 660 aa31.79■■■□□ 2.68
PMS1-214ENST00000446877 ANKRD13DQ6ZTN6 518 aa31.79■■■□□ 2.68
PMS1-214ENST00000446877 PLBD2Q8NHP8 589 aa31.79■■■□□ 2.68
PMS1-214ENST00000446877 TRPM7Q96QT4 1865 aa31.78■■■□□ 2.68
PMS1-214ENST00000446877 HDGFL1Q5TGJ6 251 aa31.78■■■□□ 2.68
PMS1-214ENST00000446877 USP48Q86UV5 1035 aa31.78■■■□□ 2.68
PMS1-214ENST00000446877 DPF2Q92785 391 aa31.78■■■□□ 2.68
PMS1-214ENST00000446877 C6orf229H3BNL8 230 aa31.77■■■□□ 2.68
PMS1-214ENST00000446877 CCDC146Q8IYE0 955 aa31.77■■■□□ 2.68
PMS1-214ENST00000446877 FAM89AQ96GI7 184 aa31.77■■■□□ 2.68
PMS1-214ENST00000446877 ZBTB12Q9Y330 459 aaPredicted RBP31.77■■■□□ 2.68
PMS1-214ENST00000446877 SHTN1A0MZ66 631 aa31.76■■■□□ 2.67
PMS1-214ENST00000446877 SF3B3Q15393 1217 aaKnown RBP31.76■■■□□ 2.67
PMS1-214ENST00000446877 DBF4Q9UBU7 674 aaPredicted RBP31.76■■■□□ 2.67
PMS1-214ENST00000446877 RIMBP2O15034 1052 aa31.75■■■□□ 2.67
PMS1-214ENST00000446877 NOGQ13253 232 aa31.75■■■□□ 2.67
PMS1-214ENST00000446877 CELF1Q92879 486 aaKnown RBP31.75■■■□□ 2.67
PMS1-214ENST00000446877 ATP5J2-PTCD1G3V325 749 aa31.74■■■□□ 2.67
PMS1-214ENST00000446877 PSMD14O00487 310 aa31.74■■■□□ 2.67
PMS1-214ENST00000446877 HUNKP57058 714 aa31.74■■■□□ 2.67
PMS1-214ENST00000446877 ISCA1Q9BUE6 129 aa31.74■■■□□ 2.67
PMS1-214ENST00000446877 DBNDD1Q9H9R9 158 aa31.74■■■□□ 2.67
PMS1-214ENST00000446877 HOXB7P09629 217 aa31.73■■■□□ 2.67
PMS1-214ENST00000446877 MLLT1Q03111 559 aaPredicted RBP31.73■■■□□ 2.67
PMS1-214ENST00000446877 SAMD7Q7Z3H4 446 aa31.73■■■□□ 2.67
PMS1-214ENST00000446877 EYA3Q99504 573 aa31.73■■■□□ 2.67
PMS1-214ENST00000446877 TBC1D10BQ4KMP7 808 aaPredicted RBP31.72■■■□□ 2.67
PMS1-214ENST00000446877 HYPKQ9NX55 129 aa31.72■■■□□ 2.67
PMS1-214ENST00000446877 ANKRD36CQ5JPF3 1778 aa31.71■■■□□ 2.67
PMS1-214ENST00000446877 RPS12P25398 132 aaKnown RBP31.71■■■□□ 2.67
PMS1-214ENST00000446877 GPSM2P81274 684 aa31.71■■■□□ 2.67
PMS1-214ENST00000446877 RTL5Q5HYW3 569 aaPredicted RBP31.71■■■□□ 2.67
PMS1-214ENST00000446877 KRT26Q7Z3Y9 468 aa31.71■■■□□ 2.67
PMS1-214ENST00000446877 RUNDC1Q96C34 613 aa31.71■■■□□ 2.67
PMS1-214ENST00000446877 POLLQ9UGP5 575 aa31.71■■■□□ 2.67
PMS1-214ENST00000446877 WDR43Q15061 677 aaKnown RBP eCLIP31.7■■■□□ 2.67
PMS1-214ENST00000446877 RBM26Q5T8P6 1007 aaKnown RBP31.7■■■□□ 2.67
PMS1-214ENST00000446877 DCPSQ96C86 337 aaKnown RBP31.7■■■□□ 2.67
PMS1-214ENST00000446877 CFAP44Q96MT7 982 aa31.7■■■□□ 2.67
PMS1-214ENST00000446877 TRIM35Q9UPQ4 493 aa31.7■■■□□ 2.67
PMS1-214ENST00000446877 DOK7Q18PE1 504 aa31.69■■■□□ 2.66
PMS1-214ENST00000446877 MCOLN1Q9GZU1 580 aa31.69■■■□□ 2.66
PMS1-214ENST00000446877 IRS4O14654 1257 aaPredicted RBP31.68■■■□□ 2.66
PMS1-214ENST00000446877 ECE2O60344 883 aa31.68■■■□□ 2.66
PMS1-214ENST00000446877 RPS8P62241 208 aaKnown RBP31.68■■■□□ 2.66
PMS1-214ENST00000446877 C2orf69Q8N8R5 385 aa31.68■■■□□ 2.66
PMS1-214ENST00000446877 LAMB2P55268 1798 aa31.68■■■□□ 2.66
PMS1-214ENST00000446877 RGS19P49795 217 aa31.67■■■□□ 2.66
PMS1-214ENST00000446877 TRIM28Q13263 835 aaKnown RBP31.67■■■□□ 2.66
PMS1-214ENST00000446877 DLK2Q6UY11 383 aa31.67■■■□□ 2.66
PMS1-214ENST00000446877 ZC3H12CQ9C0D7 883 aaKnown RBP31.67■■■□□ 2.66
PMS1-214ENST00000446877 DUOX1Q9NRD9 1551 aa31.66■■■□□ 2.66
PMS1-214ENST00000446877 G3V3G9 751 aa31.66■■■□□ 2.66
PMS1-214ENST00000446877 HSP90B1P14625 803 aaKnown RBP31.66■■■□□ 2.66
PMS1-214ENST00000446877 DCAF8Q5TAQ9 597 aa31.66■■■□□ 2.66
PMS1-214ENST00000446877 RGMBQ6NW40 437 aa31.66■■■□□ 2.66
PMS1-214ENST00000446877 TBC1D16Q8TBP0 767 aa31.66■■■□□ 2.66
PMS1-214ENST00000446877 GBA2Q9HCG7 927 aaPredicted RBP31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms