RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 UTYO14607 1347 aa23.01■■□□□ 1.27
PHTF1-207ENST00000446739 CTSWP56202 376 aa23■■□□□ 1.27
PHTF1-207ENST00000446739 CCDC152Q4G0S7 254 aa23■■□□□ 1.27
PHTF1-207ENST00000446739 INTS3Q68E01 1043 aaKnown RBP23■■□□□ 1.27
PHTF1-207ENST00000446739 FER1L6Q2WGJ9 1857 aa22.99■■□□□ 1.27
PHTF1-207ENST00000446739 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
PHTF1-207ENST00000446739 GRAPQ13588 217 aa22.97■■□□□ 1.27
PHTF1-207ENST00000446739 SOGA3Q5TF21 947 aa22.97■■□□□ 1.27
PHTF1-207ENST00000446739 GRAPLQ8TC17 118 aaPredicted RBP22.97■■□□□ 1.27
PHTF1-207ENST00000446739 USP44Q9H0E7 712 aa22.97■■□□□ 1.27
PHTF1-207ENST00000446739 TNNQ9UQP3 1299 aa22.97■■□□□ 1.27
PHTF1-207ENST00000446739 C21orf2O43822 256 aa22.96■■□□□ 1.27
PHTF1-207ENST00000446739 NBPF7P0C2Y1 421 aaPredicted RBP22.96■■□□□ 1.27
PHTF1-207ENST00000446739 FTSJ3Q8IY81 847 aaKnown RBP22.96■■□□□ 1.27
PHTF1-207ENST00000446739 DZIP1LQ8IYY4 767 aaKnown RBP22.96■■□□□ 1.27
PHTF1-207ENST00000446739 TTLL11Q8NHH1 800 aa22.96■■□□□ 1.27
PHTF1-207ENST00000446739 C7orf43Q8WVR3 580 aa22.96■■□□□ 1.27
PHTF1-207ENST00000446739 PPEF1O14829 653 aaPredicted RBP22.95■■□□□ 1.26
PHTF1-207ENST00000446739 BBOX1O75936 387 aa22.95■■□□□ 1.26
PHTF1-207ENST00000446739 SBF1O95248 1867 aa22.95■■□□□ 1.26
PHTF1-207ENST00000446739 MS4A1P11836 297 aa22.95■■□□□ 1.26
PHTF1-207ENST00000446739 CCDC88AQ3V6T2 1871 aa22.95■■□□□ 1.26
PHTF1-207ENST00000446739 RTL9Q8NET4 1388 aa22.95■■□□□ 1.26
PHTF1-207ENST00000446739 CSF1RP07333 972 aa22.94■■□□□ 1.26
PHTF1-207ENST00000446739 ARHGAP27Q6ZUM4 889 aa22.94■■□□□ 1.26
PHTF1-207ENST00000446739 TMC4Q7Z404 712 aa22.94■■□□□ 1.26
PHTF1-207ENST00000446739 SUCLG2Q96I99 432 aa22.94■■□□□ 1.26
PHTF1-207ENST00000446739 ZNF219Q9P2Y4 722 aaPredicted RBP22.94■■□□□ 1.26
PHTF1-207ENST00000446739 SPEF2Q9C093 1822 aa22.94■■□□□ 1.26
PHTF1-207ENST00000446739 FOXO4P98177 505 aa22.93■■□□□ 1.26
PHTF1-207ENST00000446739 CCDC93Q567U6 631 aa22.93■■□□□ 1.26
PHTF1-207ENST00000446739 CC2D2BQ6DHV5 1058 aa22.93■■□□□ 1.26
PHTF1-207ENST00000446739 TMEM57Q8N5G2 664 aa22.93■■□□□ 1.26
PHTF1-207ENST00000446739 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.93■■□□□ 1.26
PHTF1-207ENST00000446739 CCDC85AQ96PX6 553 aaPredicted RBP22.93■■□□□ 1.26
PHTF1-207ENST00000446739 HDAC5Q9UQL6 1122 aa22.93■■□□□ 1.26
PHTF1-207ENST00000446739 LRRC37AA6NMS7 1700 aa22.93■■□□□ 1.26
PHTF1-207ENST00000446739 UBTFL1P0CB47 393 aaPredicted RBP22.92■■□□□ 1.26
PHTF1-207ENST00000446739 TMX4Q9H1E5 349 aaPredicted RBP22.92■■□□□ 1.26
PHTF1-207ENST00000446739 GREM2Q9H772 168 aa22.92■■□□□ 1.26
PHTF1-207ENST00000446739 SEC31BQ9NQW1 1179 aa22.92■■□□□ 1.26
PHTF1-207ENST00000446739 RPS8P62241 208 aaKnown RBP22.91■■□□□ 1.26
PHTF1-207ENST00000446739 EPHA10Q5JZY3 1008 aa22.91■■□□□ 1.26
PHTF1-207ENST00000446739 CELF1Q92879 486 aaKnown RBP22.91■■□□□ 1.26
PHTF1-207ENST00000446739 CDC5LQ99459 802 aaKnown RBP22.91■■□□□ 1.26
PHTF1-207ENST00000446739 ATP6V0A2Q9Y487 856 aa22.91■■□□□ 1.26
PHTF1-207ENST00000446739 COL4A1P02462 1669 aa22.9■■□□□ 1.26
PHTF1-207ENST00000446739 GNAI3P08754 354 aa22.9■■□□□ 1.26
PHTF1-207ENST00000446739 RLBP1P12271 317 aa22.9■■□□□ 1.26
PHTF1-207ENST00000446739 GRIPAP1Q4V328 841 aa22.9■■□□□ 1.26
PHTF1-207ENST00000446739 LMBR1LQ6UX01 489 aa22.9■■□□□ 1.26
PHTF1-207ENST00000446739 KAZALD1Q96I82 304 aa22.9■■□□□ 1.26
PHTF1-207ENST00000446739 DICER1Q9UPY3 1922 aaKnown RBP22.89■■□□□ 1.25
PHTF1-207ENST00000446739 ITGA6P23229 1130 aa22.89■■□□□ 1.25
PHTF1-207ENST00000446739 FAM161AQ3B820 660 aa22.89■■□□□ 1.25
PHTF1-207ENST00000446739 ANKRD18AQ8IVF6 992 aa22.89■■□□□ 1.25
PHTF1-207ENST00000446739 SP8Q8IXZ3 490 aa22.89■■□□□ 1.25
PHTF1-207ENST00000446739 RTKN2Q8IZC4 609 aa22.89■■□□□ 1.25
PHTF1-207ENST00000446739 MEIS3Q99687 375 aa22.89■■□□□ 1.25
PHTF1-207ENST00000446739 BICC1Q9H694 974 aaKnown RBP22.89■■□□□ 1.25
PHTF1-207ENST00000446739 LTBP3Q9NS15 1303 aa22.88■■□□□ 1.25
PHTF1-207ENST00000446739 PLIN1O60240 522 aa22.88■■□□□ 1.25
PHTF1-207ENST00000446739 RABL6Q3YEC7 729 aaPredicted RBP22.88■■□□□ 1.25
PHTF1-207ENST00000446739 OLFM4Q6UX06 510 aa22.88■■□□□ 1.25
PHTF1-207ENST00000446739 CHMP3Q9Y3E7 222 aa22.88■■□□□ 1.25
PHTF1-207ENST00000446739 SNED1Q8TER0 1413 aa22.88■■□□□ 1.25
PHTF1-207ENST00000446739 ANKRD18BA2A2Z9 1011 aa22.87■■□□□ 1.25
PHTF1-207ENST00000446739 NFKBIEO00221 500 aa22.87■■□□□ 1.25
PHTF1-207ENST00000446739 IFIT5Q13325 482 aaKnown RBP22.87■■□□□ 1.25
PHTF1-207ENST00000446739 ITPRIPQ8IWB1 547 aa22.87■■□□□ 1.25
PHTF1-207ENST00000446739 CCDC57Q2TAC2 916 aa22.86■■□□□ 1.25
PHTF1-207ENST00000446739 ANKRD44Q8N8A2 993 aa22.86■■□□□ 1.25
PHTF1-207ENST00000446739 PANK1Q8TE04 598 aa22.86■■□□□ 1.25
PHTF1-207ENST00000446739 TAOK3Q9H2K8 898 aa22.86■■□□□ 1.25
PHTF1-207ENST00000446739 IGHMBP2P38935 993 aaKnown RBP22.85■■□□□ 1.25
PHTF1-207ENST00000446739 FKBP4Q02790 459 aaKnown RBP eCLIP22.85■■□□□ 1.25
PHTF1-207ENST00000446739 RASSF7Q02833 373 aa22.85■■□□□ 1.25
PHTF1-207ENST00000446739 PDE3AQ14432 1141 aa22.85■■□□□ 1.25
PHTF1-207ENST00000446739 PSMD1Q99460 953 aa22.84■■□□□ 1.25
PHTF1-207ENST00000446739 BSDC1Q9NW68 430 aaPredicted RBP22.84■■□□□ 1.25
PHTF1-207ENST00000446739 LRRFIP2Q9Y608 721 aaKnown RBP22.84■■□□□ 1.25
PHTF1-207ENST00000446739 MPHOSPH8Q99549 860 aa22.83■■□□□ 1.25
PHTF1-207ENST00000446739 LTBP1Q14766 1721 aa22.82■■□□□ 1.24
PHTF1-207ENST00000446739 GNAI2P04899 355 aa22.82■■□□□ 1.24
PHTF1-207ENST00000446739 LMNB1P20700 586 aa22.82■■□□□ 1.24
PHTF1-207ENST00000446739 MVPQ14764 893 aaKnown RBP22.82■■□□□ 1.24
PHTF1-207ENST00000446739 TAF7LQ5H9L4 462 aa22.82■■□□□ 1.24
PHTF1-207ENST00000446739 SLC51AQ86UW1 340 aa22.82■■□□□ 1.24
PHTF1-207ENST00000446739 MPNDQ8N594 471 aa22.82■■□□□ 1.24
PHTF1-207ENST00000446739 ZBTB7BO15156 539 aaPredicted RBP22.81■■□□□ 1.24
PHTF1-207ENST00000446739 RRP1P56182 461 aaKnown RBP22.81■■□□□ 1.24
PHTF1-207ENST00000446739 DPP8Q6V1X1 898 aaPredicted RBP22.81■■□□□ 1.24
PHTF1-207ENST00000446739 A0A1B0GUL6 1792 aa22.81■■□□□ 1.24
PHTF1-207ENST00000446739 C9orf131Q5VYM1 1079 aa22.8■■□□□ 1.24
PHTF1-207ENST00000446739 SUPT20HQ8NEM7 779 aa22.8■■□□□ 1.24
PHTF1-207ENST00000446739 RTFDC1Q9BY42 306 aaPredicted RBP22.8■■□□□ 1.24
PHTF1-207ENST00000446739 DDX19BQ9UMR2 479 aa22.8■■□□□ 1.24
PHTF1-207ENST00000446739 COG6Q9Y2V7 657 aa22.8■■□□□ 1.24
PHTF1-207ENST00000446739 TIAM2Q8IVF5 1701 aa22.79■■□□□ 1.24
PHTF1-207ENST00000446739 RNF181Q9P0P0 153 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms