RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 SCN4AP35499 1836 aa7.82□□□□□ -1.16
LINC01880-201ENST00000446593 DLEC1Q9Y238 1755 aa7.82□□□□□ -1.16
LINC01880-201ENST00000446593 AFDNP55196 1824 aaKnown RBP7.81□□□□□ -1.16
LINC01880-201ENST00000446593 SNRPA1P09661 255 aaKnown RBP7.81□□□□□ -1.16
LINC01880-201ENST00000446593 EIF4G2P78344 907 aaKnown RBP eCLIP7.81□□□□□ -1.16
LINC01880-201ENST00000446593 CRY2Q49AN0 593 aa7.81□□□□□ -1.16
LINC01880-201ENST00000446593 CDC37L1Q7L3B6 337 aa7.81□□□□□ -1.16
LINC01880-201ENST00000446593 ZNF408Q9H9D4 720 aa7.81□□□□□ -1.16
LINC01880-201ENST00000446593 FER1L6Q2WGJ9 1857 aa7.81□□□□□ -1.16
LINC01880-201ENST00000446593 PPIP5K2O43314 1243 aa7.8□□□□□ -1.16
LINC01880-201ENST00000446593 PIP4K2AP48426 406 aaPredicted RBP7.8□□□□□ -1.16
LINC01880-201ENST00000446593 SUPT20HQ8NEM7 779 aa7.8□□□□□ -1.16
LINC01880-201ENST00000446593 CCDC102AQ96A19 550 aa7.8□□□□□ -1.16
LINC01880-201ENST00000446593 RBM17Q96I25 401 aaKnown RBP7.8□□□□□ -1.16
LINC01880-201ENST00000446593 SAGE1Q9NXZ1 904 aa7.8□□□□□ -1.16
LINC01880-201ENST00000446593 PGAP2Q9UHJ9 254 aa7.8□□□□□ -1.16
LINC01880-201ENST00000446593 U2SURPO15042 1029 aaKnown RBP7.79□□□□□ -1.16
LINC01880-201ENST00000446593 KCNQ3O43525 872 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 HOXA10P31260 410 aaPredicted RBP7.79□□□□□ -1.16
LINC01880-201ENST00000446593 SOX10P56693 466 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 HUNKP57058 714 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 CXCL9Q07325 125 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 TNIP1Q15025 636 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 RTF1Q92541 710 aaKnown RBP7.79□□□□□ -1.16
LINC01880-201ENST00000446593 GCC1Q96CN9 775 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 CRAMP1Q96RY5 1269 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 BCL2L13Q9BXK5 485 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 GLIS2Q9BZE0 524 aaPredicted RBP7.79□□□□□ -1.16
LINC01880-201ENST00000446593 ZNRF3Q9ULT6 936 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 SLX4Q8IY92 1834 aa7.79□□□□□ -1.16
LINC01880-201ENST00000446593 KIF7Q2M1P5 1343 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 VIRMAQ69YN4 1812 aaKnown RBP7.78□□□□□ -1.16
LINC01880-201ENST00000446593 ERVV-1B6SEH8 477 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 H7C1D1 291 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 TCERG1O14776 1098 aaKnown RBP7.78□□□□□ -1.16
LINC01880-201ENST00000446593 PPEF1O14829 653 aaPredicted RBP7.78□□□□□ -1.16
LINC01880-201ENST00000446593 GMPSP49915 693 aaPredicted RBP7.78□□□□□ -1.16
LINC01880-201ENST00000446593 HLFQ16534 295 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 AOC3Q16853 763 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 AMER1Q5JTC6 1135 aaPredicted RBP7.78□□□□□ -1.16
LINC01880-201ENST00000446593 NUTM1Q86Y26 1132 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 C2orf69Q8N8R5 385 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 ADAMTSL1Q8N6G6 1762 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 DICER1Q9UPY3 1922 aaKnown RBP7.78□□□□□ -1.16
LINC01880-201ENST00000446593 CDHR2Q9BYE9 1310 aa7.78□□□□□ -1.16
LINC01880-201ENST00000446593 CCDC88AQ3V6T2 1871 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 CEMIPQ8WUJ3 1361 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 NPC1L1Q9UHC9 1359 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 PRAMEF22A3QJZ6 481 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 NBPF26B4DH59 902 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 TRPA1O75762 1119 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 HSPA5P11021 654 aaKnown RBP7.77□□□□□ -1.17
LINC01880-201ENST00000446593 PKN2Q16513 984 aaKnown RBP7.77□□□□□ -1.17
LINC01880-201ENST00000446593 RGMBQ6NW40 437 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 NBPF10Q6P3W6 841 aaKnown RBP7.77□□□□□ -1.17
LINC01880-201ENST00000446593 CTU1Q7Z7A3 348 aaKnown RBP7.77□□□□□ -1.17
LINC01880-201ENST00000446593 USP48Q86UV5 1035 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 NLRP3Q96P20 1036 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 RNF186Q9NXI6 227 aa7.77□□□□□ -1.17
LINC01880-201ENST00000446593 SCN11AQ9UI33 1791 aa7.76□□□□□ -1.17
LINC01880-201ENST00000446593 TNRC18O15417 2968 aaPredicted RBP7.76□□□□□ -1.17
LINC01880-201ENST00000446593 ZNF157P51786 506 aaPredicted RBP7.76□□□□□ -1.17
LINC01880-201ENST00000446593 KIF23Q02241 960 aaPredicted RBP7.76□□□□□ -1.17
LINC01880-201ENST00000446593 DPP8Q6V1X1 898 aaPredicted RBP7.76□□□□□ -1.17
LINC01880-201ENST00000446593 KIF6Q6ZMV9 814 aa7.76□□□□□ -1.17
LINC01880-201ENST00000446593 PPP1R42Q7Z4L9 355 aa7.76□□□□□ -1.17
LINC01880-201ENST00000446593 NGEFQ8N5V2 710 aa7.76□□□□□ -1.17
LINC01880-201ENST00000446593 DCPSQ96C86 337 aaKnown RBP7.76□□□□□ -1.17
LINC01880-201ENST00000446593 ZIC5Q96T25 663 aa7.76□□□□□ -1.17
LINC01880-201ENST00000446593 CNOT7Q9UIV1 285 aaKnown RBP7.76□□□□□ -1.17
LINC01880-201ENST00000446593 ATP6V0A2Q9Y487 856 aa7.76□□□□□ -1.17
LINC01880-201ENST00000446593 ANKRD31Q8N7Z5 1873 aa7.76□□□□□ -1.17
LINC01880-201ENST00000446593 COL11A2P13942 1736 aaPredicted RBP7.75□□□□□ -1.17
LINC01880-201ENST00000446593 BBOX1O75936 387 aa7.75□□□□□ -1.17
LINC01880-201ENST00000446593 RAD17O75943 681 aa7.75□□□□□ -1.17
LINC01880-201ENST00000446593 HOXB1P14653 301 aaPredicted RBP7.75□□□□□ -1.17
LINC01880-201ENST00000446593 HIRAP54198 1017 aaPredicted RBP7.75□□□□□ -1.17
LINC01880-201ENST00000446593 CC2D1BQ5T0F9 858 aaKnown RBP7.75□□□□□ -1.17
LINC01880-201ENST00000446593 KRT26Q7Z3Y9 468 aa7.75□□□□□ -1.17
LINC01880-201ENST00000446593 MPNDQ8N594 471 aa7.75□□□□□ -1.17
LINC01880-201ENST00000446593 DPF2Q92785 391 aa7.75□□□□□ -1.17
LINC01880-201ENST00000446593 RTFDC1Q9BY42 306 aaPredicted RBP7.75□□□□□ -1.17
LINC01880-201ENST00000446593 GBA2Q9HCG7 927 aaPredicted RBP7.75□□□□□ -1.17
LINC01880-201ENST00000446593 SNED1Q8TER0 1413 aa7.75□□□□□ -1.17
LINC01880-201ENST00000446593 THSD7BQ9C0I4 1608 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 SCN7AQ01118 1682 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 FAM155AB1AL88 458 aaPredicted RBP7.74□□□□□ -1.17
LINC01880-201ENST00000446593 HTATSF1O43719 755 aaKnown RBP7.74□□□□□ -1.17
LINC01880-201ENST00000446593 GPTP24298 496 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 KIAA2012Q0VF49 1180 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 TAF7Q15545 349 aaPredicted RBP7.74□□□□□ -1.17
LINC01880-201ENST00000446593 SUSD4Q5VX71 490 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 MCM10Q7L590 875 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 SP8Q8IXZ3 490 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 MICALL2Q8IY33 904 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 PHACTR3Q96KR7 559 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 HDAC9Q9UKV0 1011 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 NUDCQ9Y266 331 aa7.74□□□□□ -1.17
LINC01880-201ENST00000446593 RRP7AQ9Y3A4 280 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms