RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 PTPN12Q05209 780 aaKnown RBP11.8□□□□□ -0.52
NPHP1-207ENST00000445609 FAM161AQ3B820 660 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 KLHDC4Q8TBB5 520 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 NLRP3Q96P20 1036 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 GREM2Q9H772 168 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 MMP10P09238 476 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 G3BP1Q13283 466 aaKnown RBP eCLIP11.8□□□□□ -0.52
NPHP1-207ENST00000445609 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
NPHP1-207ENST00000445609 CCDC152Q4G0S7 254 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 MSL1Q68DK7 614 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 ILDR2Q71H61 639 aa11.8□□□□□ -0.52
NPHP1-207ENST00000445609 ANKRD18BA2A2Z9 1011 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 ITGA6P23229 1130 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 ST5P78524 1137 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 SF3B3Q15393 1217 aaKnown RBP11.79□□□□□ -0.52
NPHP1-207ENST00000445609 CCDC24Q8N4L8 307 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 SLC16A10Q8TF71 515 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 TUBGCP6Q96RT7 1819 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 COL24A1Q17RW2 1714 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 ERC1Q8IUD2 1116 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 LNPKQ9C0E8 428 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 PDGFDQ9GZP0 370 aaPredicted RBP11.79□□□□□ -0.52
NPHP1-207ENST00000445609 SIL1Q9H173 461 aa11.79□□□□□ -0.52
NPHP1-207ENST00000445609 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
NPHP1-207ENST00000445609 KIF1BPQ96EK5 621 aa11.78□□□□□ -0.52
NPHP1-207ENST00000445609 RTL9Q8NET4 1388 aa11.78□□□□□ -0.52
NPHP1-207ENST00000445609 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
NPHP1-207ENST00000445609 SKAP1Q86WV1 359 aa11.78□□□□□ -0.52
NPHP1-207ENST00000445609 RHPN1Q8TCX5 695 aa11.78□□□□□ -0.52
NPHP1-207ENST00000445609 ZNF594Q96JF6 807 aaPredicted RBP11.78□□□□□ -0.52
NPHP1-207ENST00000445609 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
NPHP1-207ENST00000445609 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.53
NPHP1-207ENST00000445609 EYA2O00167 538 aa11.77□□□□□ -0.53
NPHP1-207ENST00000445609 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.53
NPHP1-207ENST00000445609 CIAO1O76071 339 aa11.76□□□□□ -0.53
NPHP1-207ENST00000445609 RGS3P49796 1198 aa11.76□□□□□ -0.53
NPHP1-207ENST00000445609 BCL11AQ9H165 835 aa11.76□□□□□ -0.53
NPHP1-207ENST00000445609 RIC1Q4ADV7 1423 aa11.76□□□□□ -0.53
NPHP1-207ENST00000445609 SASH1O94885 1247 aa11.76□□□□□ -0.53
NPHP1-207ENST00000445609 IL15P40933 162 aaPredicted RBP11.76□□□□□ -0.53
NPHP1-207ENST00000445609 R3HDM1Q15032 1099 aaKnown RBP11.76□□□□□ -0.53
NPHP1-207ENST00000445609 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
NPHP1-207ENST00000445609 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
NPHP1-207ENST00000445609 PDE4AP27815 886 aa11.75□□□□□ -0.53
NPHP1-207ENST00000445609 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
NPHP1-207ENST00000445609 ATG9AQ7Z3C6 839 aa11.75□□□□□ -0.53
NPHP1-207ENST00000445609 CDC5LQ99459 802 aaKnown RBP11.75□□□□□ -0.53
NPHP1-207ENST00000445609 BRIP1Q9BX63 1249 aa11.75□□□□□ -0.53
NPHP1-207ENST00000445609 IL1RAPL2Q9NP60 686 aa11.75□□□□□ -0.53
NPHP1-207ENST00000445609 DDX60Q8IY21 1712 aaKnown RBP11.75□□□□□ -0.53
NPHP1-207ENST00000445609 C16orf71Q8IYS4 520 aaPredicted RBP11.75□□□□□ -0.53
NPHP1-207ENST00000445609 CLASRPQ8N2M8 674 aaKnown RBP11.75□□□□□ -0.53
NPHP1-207ENST00000445609 PUS3Q9BZE2 481 aaKnown RBP11.75□□□□□ -0.53
NPHP1-207ENST00000445609 IGHMBP2P38935 993 aaKnown RBP11.74□□□□□ -0.53
NPHP1-207ENST00000445609 CRY2Q49AN0 593 aa11.74□□□□□ -0.53
NPHP1-207ENST00000445609 DDX46Q7L014 1031 aaKnown RBP11.74□□□□□ -0.53
NPHP1-207ENST00000445609 MPHOSPH8Q99549 860 aa11.74□□□□□ -0.53
NPHP1-207ENST00000445609 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
NPHP1-207ENST00000445609 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
NPHP1-207ENST00000445609 TFCP2Q12800 502 aa11.74□□□□□ -0.53
NPHP1-207ENST00000445609 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
NPHP1-207ENST00000445609 RIPOR2Q9Y4F9 1068 aa11.74□□□□□ -0.53
NPHP1-207ENST00000445609 LAMB2P55268 1798 aa11.73□□□□□ -0.53
NPHP1-207ENST00000445609 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
NPHP1-207ENST00000445609 RPGRQ92834 1020 aaKnown RBP11.73□□□□□ -0.53
NPHP1-207ENST00000445609 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
NPHP1-207ENST00000445609 ZBTB7AO95365 584 aa11.73□□□□□ -0.53
NPHP1-207ENST00000445609 PDE6BP35913 854 aa11.73□□□□□ -0.53
NPHP1-207ENST00000445609 RPS8P62241 208 aaKnown RBP11.73□□□□□ -0.53
NPHP1-207ENST00000445609 MTFR1LQ9H019 292 aa11.73□□□□□ -0.53
NPHP1-207ENST00000445609 PLEKHM2Q8IWE5 1019 aa11.72□□□□□ -0.53
NPHP1-207ENST00000445609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.72□□□□□ -0.53
NPHP1-207ENST00000445609 MYH3P11055 1940 aa11.72□□□□□ -0.53
NPHP1-207ENST00000445609 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
NPHP1-207ENST00000445609 HOXA10P31260 410 aaPredicted RBP11.71□□□□□ -0.53
NPHP1-207ENST00000445609 METTL24Q5JXM2 366 aa11.71□□□□□ -0.53
NPHP1-207ENST00000445609 AACSQ86V21 672 aa11.71□□□□□ -0.53
NPHP1-207ENST00000445609 OTUD7AQ8TE49 926 aaPredicted RBP11.71□□□□□ -0.53
NPHP1-207ENST00000445609 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.53
NPHP1-207ENST00000445609 RBM17Q96I25 401 aaKnown RBP11.71□□□□□ -0.53
NPHP1-207ENST00000445609 GPR108Q9NPR9 543 aa11.71□□□□□ -0.53
NPHP1-207ENST00000445609 BSDC1Q9NW68 430 aaPredicted RBP11.71□□□□□ -0.53
NPHP1-207ENST00000445609 MROH5Q6ZUA9 1318 aa11.71□□□□□ -0.53
NPHP1-207ENST00000445609 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
NPHP1-207ENST00000445609 EAF2Q96CJ1 260 aaPredicted RBP11.71□□□□□ -0.53
NPHP1-207ENST00000445609 GRAPQ13588 217 aa11.7□□□□□ -0.54
NPHP1-207ENST00000445609 TNNI3KQ59H18 835 aa11.7□□□□□ -0.54
NPHP1-207ENST00000445609 GRAPLQ8TC17 118 aaPredicted RBP11.7□□□□□ -0.54
NPHP1-207ENST00000445609 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
NPHP1-207ENST00000445609 AKAP2Q9Y2D5 859 aa11.7□□□□□ -0.54
NPHP1-207ENST00000445609 FPGT-TNNI3KV9GXZ4 949 aa11.7□□□□□ -0.54
NPHP1-207ENST00000445609 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
NPHP1-207ENST00000445609 MX1P20591 662 aa11.7□□□□□ -0.54
NPHP1-207ENST00000445609 POLD1P28340 1107 aa11.7□□□□□ -0.54
NPHP1-207ENST00000445609 CRAMP1Q96RY5 1269 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms