RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 DMRTB1Q96MA1 342 aa8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 NIF3L1Q9GZT8 377 aa8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 ELP3Q9H9T3 547 aa8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 MBIPQ9NS73 344 aa8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 CCDC9Q9Y3X0 531 aaKnown RBP8.01□□□□□ -1.13
HMGB3P6-201ENST00000444896 BMP4P12644 408 aa8□□□□□ -1.13
HMGB3P6-201ENST00000444896 EHHADHQ08426 723 aa8□□□□□ -1.13
HMGB3P6-201ENST00000444896 NPAS4Q8IUM7 802 aa8□□□□□ -1.13
HMGB3P6-201ENST00000444896 ZSCAN29Q8IWY8 852 aaPredicted RBP8□□□□□ -1.13
HMGB3P6-201ENST00000444896 BHMTQ93088 406 aa8□□□□□ -1.13
HMGB3P6-201ENST00000444896 CNTN3Q9P232 1028 aa8□□□□□ -1.13
HMGB3P6-201ENST00000444896 GTF3C5Q9Y5Q8 519 aaPredicted RBP8□□□□□ -1.13
HMGB3P6-201ENST00000444896 NFKB1P19838 968 aa7.99□□□□□ -1.13
HMGB3P6-201ENST00000444896 ZNF438Q7Z4V0 828 aa7.99□□□□□ -1.13
HMGB3P6-201ENST00000444896 EFCC1Q9HA90 598 aa7.99□□□□□ -1.13
HMGB3P6-201ENST00000444896 FOXD3Q9UJU5 478 aaPredicted RBP7.99□□□□□ -1.13
HMGB3P6-201ENST00000444896 IGF1RP08069 1367 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 FAM181BA6NEQ2 426 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 WIPF1O43516 503 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 MMP20O60882 483 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 TNFRSF21O75509 655 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 PLCB3Q01970 1234 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 ZNF468Q5VIY5 522 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 SYT9Q86SS6 491 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 C1orf127Q8N9H9 656 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 TTC16Q8NEE8 873 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 CHRDQ9H2X0 955 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 ABI2Q9NYB9 513 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 PRR12Q9ULL5 1215 aa7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.98□□□□□ -1.13
HMGB3P6-201ENST00000444896 MAP3K6O95382 1288 aa7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 RARAP10276 462 aa7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 ERCC3P19447 782 aa7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 PCBP4P57723 403 aaKnown RBP7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 MAP3K10Q02779 954 aa7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 FMR1Q06787 632 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 ORC1Q13415 861 aa7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 PNMA5Q96PV4 448 aa7.97□□□□□ -1.13
HMGB3P6-201ENST00000444896 ZBTB42B2RXF5 422 aa7.96□□□□□ -1.14
HMGB3P6-201ENST00000444896 CYP2E1P05181 493 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P6-201ENST00000444896 MAP2K3P46734 347 aa7.96□□□□□ -1.14
HMGB3P6-201ENST00000444896 SRSF11Q05519 484 aaKnown RBP7.96□□□□□ -1.14
HMGB3P6-201ENST00000444896 MDFIQ99750 246 aa7.96□□□□□ -1.14
HMGB3P6-201ENST00000444896 ZFYVE28Q9HCC9 887 aa7.96□□□□□ -1.14
HMGB3P6-201ENST00000444896 AVENQ9NQS1 362 aaPredicted RBP7.96□□□□□ -1.14
HMGB3P6-201ENST00000444896 TLR7Q9NYK1 1049 aaKnown RBP7.96□□□□□ -1.14
HMGB3P6-201ENST00000444896 SIN3BO75182 1162 aa7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 ADAMTS2O95450 1211 aa7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 P4HBP07237 508 aaKnown RBP7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 ARAFP10398 606 aa7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 TTC39BQ5VTQ0 682 aaPredicted RBP7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 USPL1Q5W0Q7 1092 aa7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 DHX32Q7L7V1 743 aaKnown RBP7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 FBXO33Q7Z6M2 555 aa7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 FCHSD1Q86WN1 690 aa7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 SVOPQ8N4V2 548 aa7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 OR13H1Q8NG92 308 aa7.95□□□□□ -1.14
HMGB3P6-201ENST00000444896 EREGO14944 169 aa7.94□□□□□ -1.14
HMGB3P6-201ENST00000444896 COL19A1Q14993 1142 aa7.94□□□□□ -1.14
HMGB3P6-201ENST00000444896 COL13A1Q5TAT6 717 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P6-201ENST00000444896 SNX29Q8TEQ0 813 aa7.94□□□□□ -1.14
HMGB3P6-201ENST00000444896 FOXD4L4Q8WXT5 416 aaPredicted RBP7.94□□□□□ -1.14
HMGB3P6-201ENST00000444896 TNFRSF25Q93038 417 aa7.94□□□□□ -1.14
HMGB3P6-201ENST00000444896 ACDQ96AP0 544 aa7.94□□□□□ -1.14
HMGB3P6-201ENST00000444896 CSRNP1Q96S65 589 aa7.94□□□□□ -1.14
HMGB3P6-201ENST00000444896 EIF1AYO14602 144 aaKnown RBP7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 PHACTR2O75167 634 aa7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 SLURP2P0DP57 97 aa7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 TAGLNQ01995 201 aaKnown RBP7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 NEUROD1Q13562 356 aa7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 ENOX2Q16206 610 aaKnown RBP7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 C1orf229Q6ZS94 237 aaPredicted RBP7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 SETDB2Q96T68 719 aa7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 GGA1Q9UJY5 639 aa7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 WWC3Q9ULE0 1092 aa7.93□□□□□ -1.14
HMGB3P6-201ENST00000444896 NEURL1BA8MQ27 555 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 NEFLP07196 543 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 HOXD8P13378 290 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 ADH6P28332 368 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 SOX18P35713 384 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 MAPK8P45983 427 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 TRPM4Q8TD43 1214 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 OXCT2Q9BYC2 517 aaPredicted RBP7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 DNAJC25Q9H1X3 360 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 ENAMQ9NRM1 1142 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 SALL4Q9UJQ4 1053 aa7.92□□□□□ -1.14
HMGB3P6-201ENST00000444896 ADARB2-AS1A8MUL3 147 aa7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 CPNE3O75131 537 aaKnown RBP7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 KIF4AO95239 1232 aa7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 POLR3DP05423 398 aaPredicted RBP7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 PSAPP07602 524 aa7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 CES1P23141 567 aa7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 NRLP54845 237 aa7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 PLAURQ03405 335 aa7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 IGFLR1Q9H665 355 aa7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 DNAJB12Q9NXW2 375 aaKnown RBP7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 KANSL3Q9P2N6 904 aa7.91□□□□□ -1.14
HMGB3P6-201ENST00000444896 PNMA6FA0A0J9YX94 578 aa7.9□□□□□ -1.14
HMGB3P6-201ENST00000444896 GPLD1P80108 840 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms