RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 GOLGA6L6A8MZA4 724 aa25.75■■□□□ 1.71
SKIDA1-201ENST00000444772 KRT28Q7Z3Y7 464 aa25.75■■□□□ 1.71
SKIDA1-201ENST00000444772 MYD88Q99836 296 aa25.75■■□□□ 1.71
SKIDA1-201ENST00000444772 DNTTIP2Q5QJE6 756 aaKnown RBP25.75■■□□□ 1.71
SKIDA1-201ENST00000444772 ANKRD13DQ6ZTN6 518 aa25.75■■□□□ 1.71
SKIDA1-201ENST00000444772 ZNF589Q86UQ0 364 aaPredicted RBP25.75■■□□□ 1.71
SKIDA1-201ENST00000444772 FAM200AQ8TCP9 573 aa25.75■■□□□ 1.71
SKIDA1-201ENST00000444772 KDM6AO15550 1401 aaPredicted RBP25.75■■□□□ 1.71
SKIDA1-201ENST00000444772 FAM13BQ9NYF5 915 aa25.74■■□□□ 1.71
SKIDA1-201ENST00000444772 MYL6BP14649 208 aa25.74■■□□□ 1.71
SKIDA1-201ENST00000444772 RABL6Q3YEC7 729 aaPredicted RBP25.74■■□□□ 1.71
SKIDA1-201ENST00000444772 TNNI3KQ59H18 835 aa25.74■■□□□ 1.71
SKIDA1-201ENST00000444772 MYRIPQ8NFW9 859 aa25.74■■□□□ 1.71
SKIDA1-201ENST00000444772 DDX19AQ9NUU7 478 aaKnown RBP25.74■■□□□ 1.71
SKIDA1-201ENST00000444772 U3KPZ7 1027 aaPredicted RBP25.74■■□□□ 1.71
SKIDA1-201ENST00000444772 FPGT-TNNI3KV9GXZ4 949 aa25.74■■□□□ 1.71
SKIDA1-201ENST00000444772 TICAM2Q86XR7 235 aa25.73■■□□□ 1.71
SKIDA1-201ENST00000444772 TTC12Q9H892 705 aaPredicted RBP25.73■■□□□ 1.71
SKIDA1-201ENST00000444772 GOLGA6L4A6NEF3 574 aa25.73■■□□□ 1.71
SKIDA1-201ENST00000444772 TATP17735 454 aaPredicted RBP25.73■■□□□ 1.71
SKIDA1-201ENST00000444772 RFX5P48382 616 aaPredicted RBP25.73■■□□□ 1.71
SKIDA1-201ENST00000444772 SLC39A6Q13433 755 aa25.73■■□□□ 1.71
SKIDA1-201ENST00000444772 EPHA10Q5JZY3 1008 aa25.73■■□□□ 1.71
SKIDA1-201ENST00000444772 KLHDC4Q8TBB5 520 aa25.73■■□□□ 1.71
SKIDA1-201ENST00000444772 SNRPA1P09661 255 aaKnown RBP25.72■■□□□ 1.71
SKIDA1-201ENST00000444772 PHKG2P15735 406 aa25.72■■□□□ 1.71
SKIDA1-201ENST00000444772 RBM10P98175 930 aaKnown RBP25.72■■□□□ 1.71
SKIDA1-201ENST00000444772 SPATA32Q96LK8 384 aa25.72■■□□□ 1.71
SKIDA1-201ENST00000444772 FERMT3Q86UX7 667 aa25.72■■□□□ 1.71
SKIDA1-201ENST00000444772 ZNF830Q96NB3 372 aaPredicted RBP25.72■■□□□ 1.71
SKIDA1-201ENST00000444772 DBNLQ9UJU6 430 aaKnown RBP25.72■■□□□ 1.71
SKIDA1-201ENST00000444772 PTPN12Q05209 780 aaKnown RBP25.71■■□□□ 1.71
SKIDA1-201ENST00000444772 GTF3C6Q969F1 213 aa25.71■■□□□ 1.71
SKIDA1-201ENST00000444772 NEK1Q96PY6 1258 aa25.71■■□□□ 1.71
SKIDA1-201ENST00000444772 LRP10Q7Z4F1 713 aa25.71■■□□□ 1.71
SKIDA1-201ENST00000444772 RGPD5Q99666 1765 aa25.71■■□□□ 1.71
SKIDA1-201ENST00000444772 NFATC2IPQ8NCF5 419 aa25.71■■□□□ 1.71
SKIDA1-201ENST00000444772 RBM43Q6ZSC3 357 aaKnown RBP25.7■■□□□ 1.7
SKIDA1-201ENST00000444772 IFNL2Q8IZJ0 200 aa25.7■■□□□ 1.7
SKIDA1-201ENST00000444772 TYRO3Q06418 890 aa25.7■■□□□ 1.7
SKIDA1-201ENST00000444772 ZNF496Q96IT1 587 aaPredicted RBP25.7■■□□□ 1.7
SKIDA1-201ENST00000444772 TNMDQ9H2S6 317 aa25.7■■□□□ 1.7
SKIDA1-201ENST00000444772 TAF6LQ9Y6J9 622 aa25.7■■□□□ 1.7
SKIDA1-201ENST00000444772 LIG1P18858 919 aa25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 PLCB2Q00722 1185 aa25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 LEO1Q8WVC0 666 aaPredicted RBP25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 TCEANC2Q96MN5 208 aa25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 HAUS7Q99871 368 aa25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 COL9A3Q14050 684 aaPredicted RBP25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 MCMDC2Q4G0Z9 681 aa25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 TTC5Q8N0Z6 440 aa25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 ZSCAN16Q9H4T2 348 aaPredicted RBP25.69■■□□□ 1.7
SKIDA1-201ENST00000444772 GTF2F1P35269 517 aaKnown RBP eCLIP25.68■■□□□ 1.7
SKIDA1-201ENST00000444772 TFCP2Q12800 502 aa25.68■■□□□ 1.7
SKIDA1-201ENST00000444772 MRVI1Q9Y6F6 885 aa25.68■■□□□ 1.7
SKIDA1-201ENST00000444772 HMGB1P09429 215 aaKnown RBP25.68■■□□□ 1.7
SKIDA1-201ENST00000444772 AP5Z1O43299 807 aa25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 DTNBO60941 627 aa25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 KIAA1524Q8TCG1 905 aa25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 DCAF5Q96JK2 942 aa25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 FMNL2Q96PY5 1086 aa25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 NLRP2Q9NX02 1062 aa25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 DACT1Q9NYF0 836 aa25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 LLPHQ9BRT6 129 aaKnown RBP25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 CLSTN2Q9H4D0 955 aa25.67■■□□□ 1.7
SKIDA1-201ENST00000444772 C1orf167Q5SNV9 1468 aa25.66■■□□□ 1.7
SKIDA1-201ENST00000444772 CAVIN2O95810 425 aa25.66■■□□□ 1.7
SKIDA1-201ENST00000444772 MPNDQ8N594 471 aa25.66■■□□□ 1.7
SKIDA1-201ENST00000444772 ALS2Q96Q42 1657 aa25.66■■□□□ 1.7
SKIDA1-201ENST00000444772 FAM173BQ6P4H8 233 aa25.66■■□□□ 1.7
SKIDA1-201ENST00000444772 STK3Q13188 491 aa25.65■■□□□ 1.7
SKIDA1-201ENST00000444772 EDC3Q96F86 508 aaKnown RBP25.65■■□□□ 1.7
SKIDA1-201ENST00000444772 CFAP45Q9UL16 551 aa25.65■■□□□ 1.7
SKIDA1-201ENST00000444772 SH3TC1Q8TE82 1336 aa25.65■■□□□ 1.7
SKIDA1-201ENST00000444772 ZNF609O15014 1411 aa25.65■■□□□ 1.7
SKIDA1-201ENST00000444772 UBE3BQ7Z3V4 1068 aa25.65■■□□□ 1.7
SKIDA1-201ENST00000444772 AFDNP55196 1824 aaKnown RBP25.64■■□□□ 1.7
SKIDA1-201ENST00000444772 ZC3H6P61129 1189 aaKnown RBP25.64■■□□□ 1.69
SKIDA1-201ENST00000444772 Q6ZUG5 572 aa25.64■■□□□ 1.69
SKIDA1-201ENST00000444772 USP16Q9Y5T5 823 aa25.64■■□□□ 1.69
SKIDA1-201ENST00000444772 RESTQ13127 1097 aa25.63■■□□□ 1.69
SKIDA1-201ENST00000444772 CAMK4Q16566 473 aa25.63■■□□□ 1.69
SKIDA1-201ENST00000444772 KBTBD3Q8NAB2 608 aa25.63■■□□□ 1.69
SKIDA1-201ENST00000444772 TFIP11Q9UBB9 837 aaKnown RBP25.63■■□□□ 1.69
SKIDA1-201ENST00000444772 VSIG10Q8N0Z9 540 aa25.63■■□□□ 1.69
SKIDA1-201ENST00000444772 PLBD2Q8NHP8 589 aa25.63■■□□□ 1.69
SKIDA1-201ENST00000444772 A0A087WZG4 1122 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 H3BQV1 296 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 IFFO2Q5TF58 517 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 CHMP3Q9Y3E7 222 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 MEGF6O75095 1541 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 PALLDQ8WX93 1383 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 ARFGEF2Q9Y6D5 1785 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 CYP21A2P08686 494 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 SMARCC2Q8TAQ2 1214 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 BRF1Q92994 677 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 DNAJC2Q99543 621 aaKnown RBP25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 DBNDD2Q9BQY9 259 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 KIF3AQ9Y496 699 aa25.62■■□□□ 1.69
SKIDA1-201ENST00000444772 HSP90B1P14625 803 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms