RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 CTAGE5O15320 804 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 NBPF7P0C2Y1 421 aaPredicted RBP11.78□□□□□ -0.52
CASP4-203ENST00000444739 PNMA6AP0CW24 399 aaPredicted RBP11.78□□□□□ -0.52
CASP4-203ENST00000444739 RPS6KB1P23443 525 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 SNW1Q13573 536 aaKnown RBP11.78□□□□□ -0.52
CASP4-203ENST00000444739 E4F1Q66K89 784 aaPredicted RBP11.78□□□□□ -0.52
CASP4-203ENST00000444739 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 TCEANC2Q96MN5 208 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 OSBPL5Q9H0X9 879 aaPredicted RBP11.78□□□□□ -0.52
CASP4-203ENST00000444739 PHAXQ9H814 394 aaKnown RBP11.78□□□□□ -0.52
CASP4-203ENST00000444739 SNRKQ9NRH2 765 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 ECHDC1Q9NTX5 307 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 TOPAZ1Q8N9V7 1692 aa11.78□□□□□ -0.52
CASP4-203ENST00000444739 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.53
CASP4-203ENST00000444739 GSDMDP57764 484 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 NBPF11Q86T75 865 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 EVI5LQ96CN4 794 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 METP08581 1390 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 BECN2A8MW95 431 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 ZRANB2O95218 330 aaKnown RBP eCLIP11.77□□□□□ -0.53
CASP4-203ENST00000444739 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 PPP1R13BQ96KQ4 1090 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 FAM227BQ96M60 508 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 TAF6LQ9Y6J9 622 aa11.77□□□□□ -0.53
CASP4-203ENST00000444739 JAK2O60674 1132 aa11.76□□□□□ -0.53
CASP4-203ENST00000444739 NMIQ13287 307 aaPredicted RBP11.76□□□□□ -0.53
CASP4-203ENST00000444739 CLASRPQ8N2M8 674 aaKnown RBP11.76□□□□□ -0.53
CASP4-203ENST00000444739 BRF1Q92994 677 aa11.76□□□□□ -0.53
CASP4-203ENST00000444739 TSPYL1Q9H0U9 437 aa11.76□□□□□ -0.53
CASP4-203ENST00000444739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.76□□□□□ -0.53
CASP4-203ENST00000444739 IGSF1Q8N6C5 1336 aa11.76□□□□□ -0.53
CASP4-203ENST00000444739 TECPR2O15040 1411 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 A0A087WWV3 80 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
CASP4-203ENST00000444739 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
CASP4-203ENST00000444739 STK3Q13188 491 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 SYT10Q6XYQ8 523 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 GOLPH3LQ9H4A5 285 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 ZSCAN16Q9H4T2 348 aaPredicted RBP11.75□□□□□ -0.53
CASP4-203ENST00000444739 ANO10Q9NW15 660 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 IMPACTQ9P2X3 320 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 CFAP45Q9UL16 551 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 KCNJ6P48051 423 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
CASP4-203ENST00000444739 ARHGAP29Q52LW3 1261 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 BEND3Q5T5X7 828 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
CASP4-203ENST00000444739 AOPEPQ8N6M6 819 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 GPATCH3Q96I76 525 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 FEZ2Q9UHY8 353 aaPredicted RBP11.75□□□□□ -0.53
CASP4-203ENST00000444739 JCADQ9P266 1359 aa11.75□□□□□ -0.53
CASP4-203ENST00000444739 USP6P35125 1406 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 GNAT3A8MTJ3 354 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 HIP1O00291 1037 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 RAD51AP2Q09MP3 1159 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 MTX1Q13505 466 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 DDX11Q96FC9 970 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 EYA1Q99502 592 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 MED23Q9ULK4 1368 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 TUBB4AP04350 444 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 TSGA10IPQ3SY00 556 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 ARMCX5Q6P1M9 558 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 CEP57L1Q8IYX8 460 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 ENGASEQ8NFI3 743 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 SIRT1Q96EB6 747 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 TRERF1Q96PN7 1200 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 UBXN6Q9BZV1 441 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 BABAM1Q9NWV8 329 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 ORC3Q9UBD5 711 aaPredicted RBP11.74□□□□□ -0.53
CASP4-203ENST00000444739 FLT4P35916 1363 aa11.74□□□□□ -0.53
CASP4-203ENST00000444739 ACEP12821 1306 aa11.73□□□□□ -0.53
CASP4-203ENST00000444739 SBNO1A3KN83 1393 aa11.73□□□□□ -0.53
CASP4-203ENST00000444739 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
CASP4-203ENST00000444739 SOX12O15370 315 aa11.73□□□□□ -0.53
CASP4-203ENST00000444739 IFIT2P09913 472 aaKnown RBP11.73□□□□□ -0.53
CASP4-203ENST00000444739 CCDC150Q8NCX0 1101 aa11.73□□□□□ -0.53
CASP4-203ENST00000444739 IL17REQ8NFR9 667 aa11.73□□□□□ -0.53
CASP4-203ENST00000444739 SYTL4Q96C24 671 aaPredicted RBP11.73□□□□□ -0.53
CASP4-203ENST00000444739 TRIM34Q9BYJ4 488 aa11.73□□□□□ -0.53
CASP4-203ENST00000444739 H3BQV1 296 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 CEBPZQ03701 1054 aaKnown RBP11.72□□□□□ -0.53
CASP4-203ENST00000444739 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
CASP4-203ENST00000444739 MUM1L1Q5H9M0 696 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.72□□□□□ -0.53
CASP4-203ENST00000444739 KINO60870 393 aaKnown RBP11.72□□□□□ -0.53
CASP4-203ENST00000444739 TPM4P67936 248 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 FAM160A1Q05DH4 1040 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 TEX35Q5T0J7 233 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 TMCO3Q6UWJ1 677 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 CCDC73Q6ZRK6 1079 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 NEK11Q8NG66 645 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 DNAAF4Q8WXU2 420 aa11.72□□□□□ -0.53
CASP4-203ENST00000444739 FTOQ9C0B1 505 aaKnown RBP eCLIP11.72□□□□□ -0.53
CASP4-203ENST00000444739 ARGLU1Q9NWB6 273 aaPredicted RBP11.72□□□□□ -0.53
CASP4-203ENST00000444739 AACSQ86V21 672 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms