RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
SSBP3-208ENST00000444533 ZNF219Q9P2Y4 722 aaPredicted RBP17.72■□□□□ 0.43
SSBP3-208ENST00000444533 CHMP3Q9Y3E7 222 aa17.72■□□□□ 0.43
SSBP3-208ENST00000444533 KIAA1551Q9HCM1 1747 aa17.72■□□□□ 0.43
SSBP3-208ENST00000444533 PPEF1O14829 653 aaPredicted RBP17.71■□□□□ 0.43
SSBP3-208ENST00000444533 C21orf2O43822 256 aa17.71■□□□□ 0.43
SSBP3-208ENST00000444533 GNAI3P08754 354 aa17.71■□□□□ 0.43
SSBP3-208ENST00000444533 GRAPQ13588 217 aa17.71■□□□□ 0.43
SSBP3-208ENST00000444533 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
SSBP3-208ENST00000444533 C3orf67Q6ZVT6 689 aa17.71■□□□□ 0.43
SSBP3-208ENST00000444533 GRAPLQ8TC17 118 aaPredicted RBP17.71■□□□□ 0.43
SSBP3-208ENST00000444533 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.42
SSBP3-208ENST00000444533 COL11A2P13942 1736 aaPredicted RBP17.7■□□□□ 0.42
SSBP3-208ENST00000444533 CCDC93Q567U6 631 aa17.7■□□□□ 0.42
SSBP3-208ENST00000444533 ANKRD18AQ8IVF6 992 aa17.7■□□□□ 0.42
SSBP3-208ENST00000444533 ITPRIPQ8IWB1 547 aa17.7■□□□□ 0.42
SSBP3-208ENST00000444533 CHMP4BQ9H444 224 aaKnown RBP17.7■□□□□ 0.42
SSBP3-208ENST00000444533 LAMB2P55268 1798 aa17.7■□□□□ 0.42
SSBP3-208ENST00000444533 CASP7P55210 303 aa17.69■□□□□ 0.42
SSBP3-208ENST00000444533 CCDC57Q2TAC2 916 aa17.69■□□□□ 0.42
SSBP3-208ENST00000444533 TAF7LQ5H9L4 462 aa17.69■□□□□ 0.42
SSBP3-208ENST00000444533 RTKN2Q8IZC4 609 aa17.69■□□□□ 0.42
SSBP3-208ENST00000444533 TTLL11Q8NHH1 800 aa17.69■□□□□ 0.42
SSBP3-208ENST00000444533 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
SSBP3-208ENST00000444533 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
SSBP3-208ENST00000444533 UTYO14607 1347 aa17.69■□□□□ 0.42
SSBP3-208ENST00000444533 ANKRD18BA2A2Z9 1011 aa17.68■□□□□ 0.42
SSBP3-208ENST00000444533 NBPF7P0C2Y1 421 aaPredicted RBP17.68■□□□□ 0.42
SSBP3-208ENST00000444533 BRCA1P38398 1863 aaKnown RBP17.68■□□□□ 0.42
SSBP3-208ENST00000444533 IGHMBP2P38935 993 aaKnown RBP17.68■□□□□ 0.42
SSBP3-208ENST00000444533 RPS8P62241 208 aaKnown RBP17.68■□□□□ 0.42
SSBP3-208ENST00000444533 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
SSBP3-208ENST00000444533 USP44Q9H0E7 712 aa17.68■□□□□ 0.42
SSBP3-208ENST00000444533 LMBR1LQ6UX01 489 aa17.67■□□□□ 0.42
SSBP3-208ENST00000444533 TMEM57Q8N5G2 664 aa17.67■□□□□ 0.42
SSBP3-208ENST00000444533 MPHOSPH8Q99549 860 aa17.67■□□□□ 0.42
SSBP3-208ENST00000444533 RTL9Q8NET4 1388 aa17.66■□□□□ 0.42
SSBP3-208ENST00000444533 ARFGEF1Q9Y6D6 1849 aa17.66■□□□□ 0.42
SSBP3-208ENST00000444533 ITGA6P23229 1130 aa17.66■□□□□ 0.42
SSBP3-208ENST00000444533 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
SSBP3-208ENST00000444533 GREM2Q9H772 168 aa17.66■□□□□ 0.42
SSBP3-208ENST00000444533 ATP6V0A2Q9Y487 856 aa17.66■□□□□ 0.42
SSBP3-208ENST00000444533 MYH3P11055 1940 aa17.65■□□□□ 0.42
SSBP3-208ENST00000444533 CSF1RP07333 972 aa17.65■□□□□ 0.42
SSBP3-208ENST00000444533 FOXO4P98177 505 aa17.65■□□□□ 0.42
SSBP3-208ENST00000444533 SP8Q8IXZ3 490 aa17.65■□□□□ 0.42
SSBP3-208ENST00000444533 TAOK3Q9H2K8 898 aa17.65■□□□□ 0.42
SSBP3-208ENST00000444533 BICC1Q9H694 974 aaKnown RBP17.65■□□□□ 0.42
SSBP3-208ENST00000444533 CACNA1SQ13698 1873 aa17.65■□□□□ 0.42
SSBP3-208ENST00000444533 PLIN1O60240 522 aa17.64■□□□□ 0.41
SSBP3-208ENST00000444533 GNAI2P04899 355 aa17.64■□□□□ 0.41
SSBP3-208ENST00000444533 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
SSBP3-208ENST00000444533 FAM161AQ3B820 660 aa17.64■□□□□ 0.41
SSBP3-208ENST00000444533 SUPT20HQ8NEM7 779 aa17.64■□□□□ 0.41
SSBP3-208ENST00000444533 CELF1Q92879 486 aaKnown RBP17.64■□□□□ 0.41
SSBP3-208ENST00000444533 SEC31BQ9NQW1 1179 aa17.64■□□□□ 0.41
SSBP3-208ENST00000444533 SLX4Q8IY92 1834 aa17.63■□□□□ 0.41
SSBP3-208ENST00000444533 DPP8Q6V1X1 898 aaPredicted RBP17.63■□□□□ 0.41
SSBP3-208ENST00000444533 PANK1Q8TE04 598 aa17.63■□□□□ 0.41
SSBP3-208ENST00000444533 MEIS3Q99687 375 aa17.63■□□□□ 0.41
SSBP3-208ENST00000444533 DDX19BQ9UMR2 479 aa17.63■□□□□ 0.41
SSBP3-208ENST00000444533 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
SSBP3-208ENST00000444533 FKBP4Q02790 459 aaKnown RBP eCLIP17.62■□□□□ 0.41
SSBP3-208ENST00000444533 MPNDQ8N594 471 aa17.62■□□□□ 0.41
SSBP3-208ENST00000444533 C7orf43Q8WVR3 580 aa17.62■□□□□ 0.41
SSBP3-208ENST00000444533 BSDC1Q9NW68 430 aaPredicted RBP17.62■□□□□ 0.41
SSBP3-208ENST00000444533 ANKIB1Q9P2G1 1089 aa17.62■□□□□ 0.41
SSBP3-208ENST00000444533 LMNB1P20700 586 aa17.61■□□□□ 0.41
SSBP3-208ENST00000444533 MVPQ14764 893 aaKnown RBP17.61■□□□□ 0.41
SSBP3-208ENST00000444533 NSFL1CQ9UNZ2 370 aaKnown RBP17.61■□□□□ 0.41
SSBP3-208ENST00000444533 LRRFIP2Q9Y608 721 aaKnown RBP17.61■□□□□ 0.41
SSBP3-208ENST00000444533 LTBP3Q9NS15 1303 aa17.61■□□□□ 0.41
SSBP3-208ENST00000444533 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
SSBP3-208ENST00000444533 RLBP1P12271 317 aa17.6■□□□□ 0.41
SSBP3-208ENST00000444533 RRP1P56182 461 aaKnown RBP17.6■□□□□ 0.41
SSBP3-208ENST00000444533 RABL6Q3YEC7 729 aaPredicted RBP17.6■□□□□ 0.41
SSBP3-208ENST00000444533 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
SSBP3-208ENST00000444533 LDHAL6AQ6ZMR3 332 aa17.6■□□□□ 0.41
SSBP3-208ENST00000444533 PSMD1Q99460 953 aa17.6■□□□□ 0.41
SSBP3-208ENST00000444533 CNNM1Q9NRU3 951 aa17.6■□□□□ 0.41
SSBP3-208ENST00000444533 RASSF7Q02833 373 aa17.59■□□□□ 0.41
SSBP3-208ENST00000444533 EYA3Q99504 573 aa17.59■□□□□ 0.41
SSBP3-208ENST00000444533 ANKRD2Q9GZV1 360 aa17.59■□□□□ 0.41
SSBP3-208ENST00000444533 RNF181Q9P0P0 153 aa17.59■□□□□ 0.41
SSBP3-208ENST00000444533 COG6Q9Y2V7 657 aa17.59■□□□□ 0.41
SSBP3-208ENST00000444533 C6orf229H3BNL8 230 aa17.58■□□□□ 0.4
SSBP3-208ENST00000444533 KCNJ4P48050 445 aa17.58■□□□□ 0.4
SSBP3-208ENST00000444533 OLFM4Q6UX06 510 aa17.58■□□□□ 0.4
SSBP3-208ENST00000444533 KAZALD1Q96I82 304 aa17.58■□□□□ 0.4
SSBP3-208ENST00000444533 VPS33BQ9H267 617 aa17.58■□□□□ 0.4
SSBP3-208ENST00000444533 XDHP47989 1333 aa17.57■□□□□ 0.4
SSBP3-208ENST00000444533 G3V3G9 751 aa17.57■□□□□ 0.4
SSBP3-208ENST00000444533 NFKBIEO00221 500 aa17.57■□□□□ 0.4
SSBP3-208ENST00000444533 ZBTB7BO15156 539 aaPredicted RBP17.57■□□□□ 0.4
SSBP3-208ENST00000444533 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
SSBP3-208ENST00000444533 C9orf131Q5VYM1 1079 aa17.57■□□□□ 0.4
SSBP3-208ENST00000444533 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
SSBP3-208ENST00000444533 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
SSBP3-208ENST00000444533 GGA1Q9UJY5 639 aa17.57■□□□□ 0.4
SSBP3-208ENST00000444533 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms