RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 SCN4AP35499 1836 aa23.38■■□□□ 1.33
VCX3B-203ENST00000444481 ZNF541Q9H0D2 1346 aa23.37■■□□□ 1.33
VCX3B-203ENST00000444481 SLC4A2P04920 1241 aa23.37■■□□□ 1.33
VCX3B-203ENST00000444481 PCCAP05165 728 aaPredicted RBP23.37■■□□□ 1.33
VCX3B-203ENST00000444481 GPC2Q8N158 579 aa23.37■■□□□ 1.33
VCX3B-203ENST00000444481 PI4KAP2A4QPH2 592 aa23.36■■□□□ 1.33
VCX3B-203ENST00000444481 EIF6P56537 245 aaKnown RBP23.36■■□□□ 1.33
VCX3B-203ENST00000444481 RTL5Q5HYW3 569 aaPredicted RBP23.36■■□□□ 1.33
VCX3B-203ENST00000444481 DPP8Q6V1X1 898 aaPredicted RBP23.36■■□□□ 1.33
VCX3B-203ENST00000444481 MPNDQ8N594 471 aa23.36■■□□□ 1.33
VCX3B-203ENST00000444481 PI4KAP1Q8N8J0 262 aa23.36■■□□□ 1.33
VCX3B-203ENST00000444481 NEXNQ0ZGT2 675 aa23.35■■□□□ 1.33
VCX3B-203ENST00000444481 MYH16Q9H6N6 1097 aa23.35■■□□□ 1.33
VCX3B-203ENST00000444481 CACNA1FO60840 1977 aa23.34■■□□□ 1.33
VCX3B-203ENST00000444481 PPIP5K2O43314 1243 aa23.34■■□□□ 1.33
VCX3B-203ENST00000444481 VAMP4O75379 141 aa23.34■■□□□ 1.33
VCX3B-203ENST00000444481 EXOSC9Q06265 439 aaKnown RBP23.33■■□□□ 1.33
VCX3B-203ENST00000444481 SLC51AQ86UW1 340 aa23.33■■□□□ 1.33
VCX3B-203ENST00000444481 NIM1KQ8IY84 436 aa23.33■■□□□ 1.33
VCX3B-203ENST00000444481 TAF1DQ9H5J8 278 aaPredicted RBP23.33■■□□□ 1.33
VCX3B-203ENST00000444481 HACL1Q9UJ83 578 aa23.33■■□□□ 1.33
VCX3B-203ENST00000444481 PDE8AO60658 829 aa23.32■■□□□ 1.32
VCX3B-203ENST00000444481 CHADLQ6NUI6 762 aa23.32■■□□□ 1.32
VCX3B-203ENST00000444481 G2E3Q7L622 706 aa23.32■■□□□ 1.32
VCX3B-203ENST00000444481 CELF1Q92879 486 aaKnown RBP23.32■■□□□ 1.32
VCX3B-203ENST00000444481 CDHR2Q9BYE9 1310 aa23.32■■□□□ 1.32
VCX3B-203ENST00000444481 COL4A5P29400 1685 aa23.32■■□□□ 1.32
VCX3B-203ENST00000444481 TAF1P21675 1872 aa23.31■■□□□ 1.32
VCX3B-203ENST00000444481 IGKV5-2P06315 115 aa23.31■■□□□ 1.32
VCX3B-203ENST00000444481 KIAA2012Q0VF49 1180 aa23.31■■□□□ 1.32
VCX3B-203ENST00000444481 FLIIQ13045 1269 aa23.31■■□□□ 1.32
VCX3B-203ENST00000444481 AOC3Q16853 763 aa23.31■■□□□ 1.32
VCX3B-203ENST00000444481 CCDC152Q4G0S7 254 aa23.31■■□□□ 1.32
VCX3B-203ENST00000444481 LRRC37AA6NMS7 1700 aa23.3■■□□□ 1.32
VCX3B-203ENST00000444481 RPS8P62241 208 aaKnown RBP23.3■■□□□ 1.32
VCX3B-203ENST00000444481 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
VCX3B-203ENST00000444481 LDHDQ86WU2 507 aa23.3■■□□□ 1.32
VCX3B-203ENST00000444481 DNAJC5GQ8N7S2 189 aa23.3■■□□□ 1.32
VCX3B-203ENST00000444481 SPINK5Q9NQ38 1064 aaPredicted RBP23.3■■□□□ 1.32
VCX3B-203ENST00000444481 EPHX2P34913 555 aa23.29■■□□□ 1.32
VCX3B-203ENST00000444481 ZNRF3Q9ULT6 936 aa23.29■■□□□ 1.32
VCX3B-203ENST00000444481 GJA3Q9Y6H8 435 aa23.29■■□□□ 1.32
VCX3B-203ENST00000444481 FKBP5Q13451 457 aaPredicted RBP23.28■■□□□ 1.32
VCX3B-203ENST00000444481 ZNF521Q96K83 1311 aa23.28■■□□□ 1.32
VCX3B-203ENST00000444481 NEURL1BA8MQ27 555 aa23.27■■□□□ 1.32
VCX3B-203ENST00000444481 NSFL1CQ9UNZ2 370 aaKnown RBP23.27■■□□□ 1.32
VCX3B-203ENST00000444481 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
VCX3B-203ENST00000444481 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
VCX3B-203ENST00000444481 LMOD1P29536 600 aaPredicted RBP23.26■■□□□ 1.31
VCX3B-203ENST00000444481 DNAAF4Q8WXU2 420 aa23.26■■□□□ 1.31
VCX3B-203ENST00000444481 CWF19L2Q2TBE0 894 aaKnown RBP23.25■■□□□ 1.31
VCX3B-203ENST00000444481 JARID2Q92833 1246 aaPredicted RBP23.25■■□□□ 1.31
VCX3B-203ENST00000444481 SEC31BQ9NQW1 1179 aa23.25■■□□□ 1.31
VCX3B-203ENST00000444481 DUOX1Q9NRD9 1551 aa23.24■■□□□ 1.31
VCX3B-203ENST00000444481 H7C1W4 665 aa23.24■■□□□ 1.31
VCX3B-203ENST00000444481 WASHC4Q2M389 1173 aa23.24■■□□□ 1.31
VCX3B-203ENST00000444481 EAPPQ56P03 285 aaPredicted RBP23.24■■□□□ 1.31
VCX3B-203ENST00000444481 LINS1Q8NG48 757 aa23.24■■□□□ 1.31
VCX3B-203ENST00000444481 SCNN1DP51172 638 aa23.23■■□□□ 1.31
VCX3B-203ENST00000444481 CTSWP56202 376 aa23.23■■□□□ 1.31
VCX3B-203ENST00000444481 GPSM2P81274 684 aa23.23■■□□□ 1.31
VCX3B-203ENST00000444481 CXCL9Q07325 125 aa23.23■■□□□ 1.31
VCX3B-203ENST00000444481 GCKRQ14397 625 aa23.23■■□□□ 1.31
VCX3B-203ENST00000444481 KLRG1Q96E93 195 aa23.23■■□□□ 1.31
VCX3B-203ENST00000444481 EYA3Q99504 573 aa23.23■■□□□ 1.31
VCX3B-203ENST00000444481 PODXL2Q9NZ53 605 aa23.23■■□□□ 1.31
VCX3B-203ENST00000444481 C6orf229H3BNL8 230 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 CCER2I3L3R5 266 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 HTRA3P83110 453 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 TNIP1Q15025 636 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 CIAPIN1Q6FI81 312 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 ANKRD18AQ8IVF6 992 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 TTLL11Q8NHH1 800 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 CDC5LQ99459 802 aaKnown RBP23.22■■□□□ 1.31
VCX3B-203ENST00000444481 CLEC11AQ9Y240 323 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 COL4A1P02462 1669 aa23.22■■□□□ 1.31
VCX3B-203ENST00000444481 POLLQ9UGP5 575 aa23.21■■□□□ 1.31
VCX3B-203ENST00000444481 RTL9Q8NET4 1388 aa23.21■■□□□ 1.31
VCX3B-203ENST00000444481 ADAMTSL1Q8N6G6 1762 aa23.21■■□□□ 1.31
VCX3B-203ENST00000444481 USP50Q70EL3 339 aaPredicted RBP23.2■■□□□ 1.3
VCX3B-203ENST00000444481 UBE3BQ7Z3V4 1068 aa23.2■■□□□ 1.3
VCX3B-203ENST00000444481 TBC1D16Q8TBP0 767 aa23.2■■□□□ 1.3
VCX3B-203ENST00000444481 CCDC85AQ96PX6 553 aaPredicted RBP23.2■■□□□ 1.3
VCX3B-203ENST00000444481 PLA2G12BQ9BX93 195 aa23.2■■□□□ 1.3
VCX3B-203ENST00000444481 MYH3P11055 1940 aa23.2■■□□□ 1.3
VCX3B-203ENST00000444481 LTBP1Q14766 1721 aa23.19■■□□□ 1.3
VCX3B-203ENST00000444481 PASKQ96RG2 1323 aa23.19■■□□□ 1.3
VCX3B-203ENST00000444481 E9PSI1 815 aa23.19■■□□□ 1.3
VCX3B-203ENST00000444481 EPS15P42566 896 aa23.19■■□□□ 1.3
VCX3B-203ENST00000444481 GPRC5DQ9NZD1 345 aa23.19■■□□□ 1.3
VCX3B-203ENST00000444481 ANKIB1Q9P2G1 1089 aa23.19■■□□□ 1.3
VCX3B-203ENST00000444481 ITGBL1O95965 494 aaPredicted RBP23.18■■□□□ 1.3
VCX3B-203ENST00000444481 ZC3H12CQ9C0D7 883 aaKnown RBP23.18■■□□□ 1.3
VCX3B-203ENST00000444481 CREBZFQ9NS37 354 aa23.18■■□□□ 1.3
VCX3B-203ENST00000444481 YDJCA8MPS7 323 aa23.17■■□□□ 1.3
VCX3B-203ENST00000444481 RIMBP2O15034 1052 aa23.17■■□□□ 1.3
VCX3B-203ENST00000444481 CASP7P55210 303 aa23.17■■□□□ 1.3
VCX3B-203ENST00000444481 JMYQ8N9B5 988 aa23.17■■□□□ 1.3
VCX3B-203ENST00000444481 GREM2Q9H772 168 aa23.17■■□□□ 1.3
VCX3B-203ENST00000444481 ADARB2Q9NS39 739 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms