RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 XAGE3Q8WTP9 111 aa22.41■■□□□ 1.18
PMPCB-204ENST00000444457 STRCP1A6NGW2 1772 aa22.41■■□□□ 1.18
PMPCB-204ENST00000444457 EAF2Q96CJ1 260 aaPredicted RBP22.41■■□□□ 1.18
PMPCB-204ENST00000444457 ZNF496Q96IT1 587 aaPredicted RBP22.41■■□□□ 1.18
PMPCB-204ENST00000444457 PKD1L3Q7Z443 1732 aa22.41■■□□□ 1.18
PMPCB-204ENST00000444457 TMEM94Q12767 1356 aa22.41■■□□□ 1.18
PMPCB-204ENST00000444457 DCCP43146 1447 aa22.4■■□□□ 1.18
PMPCB-204ENST00000444457 STX6O43752 255 aa22.4■■□□□ 1.18
PMPCB-204ENST00000444457 F13A1P00488 732 aa22.4■■□□□ 1.18
PMPCB-204ENST00000444457 PTGS1P23219 599 aa22.4■■□□□ 1.18
PMPCB-204ENST00000444457 ATP6V1DQ9Y5K8 247 aa22.4■■□□□ 1.18
PMPCB-204ENST00000444457 RUFY3Q7L099 469 aa22.4■■□□□ 1.18
PMPCB-204ENST00000444457 COPS6Q7L5N1 327 aa22.4■■□□□ 1.18
PMPCB-204ENST00000444457 LIMCH1Q9UPQ0 1083 aa22.4■■□□□ 1.18
PMPCB-204ENST00000444457 CSB-PGBD3P0DP91 1061 aa22.39■■□□□ 1.18
PMPCB-204ENST00000444457 CASTP20810 708 aaKnown RBP22.39■■□□□ 1.18
PMPCB-204ENST00000444457 GCKRQ14397 625 aa22.39■■□□□ 1.18
PMPCB-204ENST00000444457 METTL22Q9BUU2 404 aaPredicted RBP22.39■■□□□ 1.18
PMPCB-204ENST00000444457 PLEKHG2Q9H7P9 1386 aa22.39■■□□□ 1.17
PMPCB-204ENST00000444457 AFDNP55196 1824 aaKnown RBP22.39■■□□□ 1.17
PMPCB-204ENST00000444457 FIBPO43427 364 aa22.39■■□□□ 1.17
PMPCB-204ENST00000444457 CCDC192P0DO97 292 aa22.39■■□□□ 1.17
PMPCB-204ENST00000444457 KIF18AQ8NI77 898 aa22.39■■□□□ 1.17
PMPCB-204ENST00000444457 MYD88Q99836 296 aa22.39■■□□□ 1.17
PMPCB-204ENST00000444457 CCDC8Q9H0W5 538 aaPredicted RBP22.39■■□□□ 1.17
PMPCB-204ENST00000444457 SYT1P21579 422 aa22.38■■□□□ 1.17
PMPCB-204ENST00000444457 KCNB2Q92953 911 aa22.38■■□□□ 1.17
PMPCB-204ENST00000444457 SIL1Q9H173 461 aa22.38■■□□□ 1.17
PMPCB-204ENST00000444457 PAXBP1Q9Y5B6 917 aa22.38■■□□□ 1.17
PMPCB-204ENST00000444457 TERF2Q15554 542 aa22.38■■□□□ 1.17
PMPCB-204ENST00000444457 PRPF40BQ6NWY9 871 aaKnown RBP22.38■■□□□ 1.17
PMPCB-204ENST00000444457 LRP10Q7Z4F1 713 aa22.38■■□□□ 1.17
PMPCB-204ENST00000444457 FAM200AQ8TCP9 573 aa22.38■■□□□ 1.17
PMPCB-204ENST00000444457 TNS3Q68CZ2 1445 aa22.37■■□□□ 1.17
PMPCB-204ENST00000444457 CCDC171Q6TFL3 1326 aa22.37■■□□□ 1.17
PMPCB-204ENST00000444457 CABLES1Q8TDN4 633 aa22.37■■□□□ 1.17
PMPCB-204ENST00000444457 DCAF5Q96JK2 942 aa22.37■■□□□ 1.17
PMPCB-204ENST00000444457 TLR7Q9NYK1 1049 aaKnown RBP22.37■■□□□ 1.17
PMPCB-204ENST00000444457 HIP1O00291 1037 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 SNRPA1P09661 255 aaKnown RBP22.36■■□□□ 1.17
PMPCB-204ENST00000444457 CPA1P15085 419 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 TTC5Q8N0Z6 440 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 C16orf45Q96MC5 204 aaPredicted RBP22.36■■□□□ 1.17
PMPCB-204ENST00000444457 CCDC66A2RUB6 948 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 CYP27B1O15528 508 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 TPRNQ4KMQ1 711 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 EPHA10Q5JZY3 1008 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 KLHDC4Q8TBB5 520 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 LARP6Q9BRS8 491 aaKnown RBP22.36■■□□□ 1.17
PMPCB-204ENST00000444457 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.36■■□□□ 1.17
PMPCB-204ENST00000444457 USP16Q9Y5T5 823 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 ARFGEF2Q9Y6D5 1785 aa22.36■■□□□ 1.17
PMPCB-204ENST00000444457 CHRNA2Q15822 529 aa22.35■■□□□ 1.17
PMPCB-204ENST00000444457 ADCK5Q3MIX3 580 aa22.35■■□□□ 1.17
PMPCB-204ENST00000444457 JAKMIP1Q96N16 626 aaKnown RBP22.35■■□□□ 1.17
PMPCB-204ENST00000444457 TM6SF1Q9BZW5 370 aa22.35■■□□□ 1.17
PMPCB-204ENST00000444457 TNNT1P13805 278 aa22.35■■□□□ 1.17
PMPCB-204ENST00000444457 NECTIN1Q15223 517 aa22.35■■□□□ 1.17
PMPCB-204ENST00000444457 ANKRD13DQ6ZTN6 518 aa22.35■■□□□ 1.17
PMPCB-204ENST00000444457 FAM227BQ96M60 508 aa22.35■■□□□ 1.17
PMPCB-204ENST00000444457 NMIQ13287 307 aaPredicted RBP22.34■■□□□ 1.17
PMPCB-204ENST00000444457 VPS53Q5VIR6 699 aa22.34■■□□□ 1.17
PMPCB-204ENST00000444457 CCDC112Q8NEF3 446 aa22.34■■□□□ 1.17
PMPCB-204ENST00000444457 NAP1L2Q9ULW6 460 aaPredicted RBP22.34■■□□□ 1.17
PMPCB-204ENST00000444457 LAMB4A4D0S4 1761 aa22.34■■□□□ 1.17
PMPCB-204ENST00000444457 CCDC186Q7Z3E2 898 aa22.34■■□□□ 1.17
PMPCB-204ENST00000444457 FMNL2Q96PY5 1086 aa22.34■■□□□ 1.17
PMPCB-204ENST00000444457 ZSWIM6Q9HCJ5 1215 aa22.34■■□□□ 1.17
PMPCB-204ENST00000444457 GLI3P10071 1580 aa22.33■■□□□ 1.17
PMPCB-204ENST00000444457 LARGE1O95461 756 aa22.33■■□□□ 1.17
PMPCB-204ENST00000444457 KRT222Q8N1A0 295 aa22.33■■□□□ 1.17
PMPCB-204ENST00000444457 BOLA2Q9H3K6 86 aa22.33■■□□□ 1.17
PMPCB-204ENST00000444457 SNRKQ9NRH2 765 aa22.33■■□□□ 1.17
PMPCB-204ENST00000444457 PDRG1Q9NUG6 133 aa22.33■■□□□ 1.17
PMPCB-204ENST00000444457 STRCQ7RTU9 1775 aa22.33■■□□□ 1.17
PMPCB-204ENST00000444457 PARP4Q9UKK3 1724 aaKnown RBP22.33■■□□□ 1.16
PMPCB-204ENST00000444457 ZBTB22O15209 634 aa22.33■■□□□ 1.16
PMPCB-204ENST00000444457 PIP4K2AP48426 406 aaPredicted RBP22.33■■□□□ 1.16
PMPCB-204ENST00000444457 NAA30Q147X3 362 aaPredicted RBP22.33■■□□□ 1.16
PMPCB-204ENST00000444457 RBM8AQ9Y5S9 174 aaKnown RBP22.33■■□□□ 1.16
PMPCB-204ENST00000444457 CYP46A1Q9Y6A2 500 aa22.33■■□□□ 1.16
PMPCB-204ENST00000444457 LRMPQ12912 555 aa22.32■■□□□ 1.16
PMPCB-204ENST00000444457 FAM53CQ9NYF3 392 aa22.32■■□□□ 1.16
PMPCB-204ENST00000444457 SMC3Q9UQE7 1217 aa22.32■■□□□ 1.16
PMPCB-204ENST00000444457 ZKSCAN1P17029 563 aaPredicted RBP22.32■■□□□ 1.16
PMPCB-204ENST00000444457 IRX5P78411 483 aaPredicted RBP22.32■■□□□ 1.16
PMPCB-204ENST00000444457 MAP4K1Q92918 833 aa22.32■■□□□ 1.16
PMPCB-204ENST00000444457 DNM1Q05193 864 aaKnown RBP22.31■■□□□ 1.16
PMPCB-204ENST00000444457 CREB3L3Q68CJ9 461 aa22.31■■□□□ 1.16
PMPCB-204ENST00000444457 ZSCAN25Q6NSZ9 544 aa22.31■■□□□ 1.16
PMPCB-204ENST00000444457 FSD1Q9BTV5 496 aa22.31■■□□□ 1.16
PMPCB-204ENST00000444457 COPRSQ9NQ92 184 aa22.31■■□□□ 1.16
PMPCB-204ENST00000444457 MRVI1Q9Y6F6 885 aa22.31■■□□□ 1.16
PMPCB-204ENST00000444457 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.31■■□□□ 1.16
PMPCB-204ENST00000444457 CADPS2Q86UW7 1296 aa22.31■■□□□ 1.16
PMPCB-204ENST00000444457 ZNF397Q8NF99 534 aaPredicted RBP22.31■■□□□ 1.16
PMPCB-204ENST00000444457 ZSCAN31Q96LW9 406 aaPredicted RBP22.31■■□□□ 1.16
PMPCB-204ENST00000444457 A0A0D9SFI3 127 aa22.3■■□□□ 1.16
PMPCB-204ENST00000444457 IPO4Q8TEX9 1081 aaKnown RBP22.3■■□□□ 1.16
PMPCB-204ENST00000444457 SH2B1Q9NRF2 756 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms