RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 CEP85Q6P2H3 762 aa16.8■□□□□ 0.28
SF1-210ENST00000443908 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
SF1-210ENST00000443908 C1orf115Q9H7X2 142 aa16.8■□□□□ 0.28
SF1-210ENST00000443908 VEGFAP15692 232 aaPredicted RBP16.79■□□□□ 0.28
SF1-210ENST00000443908 MTX1Q13505 466 aa16.79■□□□□ 0.28
SF1-210ENST00000443908 NLRP10Q86W26 655 aa16.79■□□□□ 0.28
SF1-210ENST00000443908 LRRFIP2Q9Y608 721 aaKnown RBP16.79■□□□□ 0.28
SF1-210ENST00000443908 GLTPD2A6NH11 291 aa16.78■□□□□ 0.28
SF1-210ENST00000443908 HMMRO75330 724 aa16.78■□□□□ 0.28
SF1-210ENST00000443908 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
SF1-210ENST00000443908 DPY19L2Q6NUT2 758 aa16.78■□□□□ 0.28
SF1-210ENST00000443908 SIRT2Q8IXJ6 389 aa16.78■□□□□ 0.28
SF1-210ENST00000443908 CCDC24Q8N4L8 307 aa16.78■□□□□ 0.28
SF1-210ENST00000443908 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
SF1-210ENST00000443908 CDHR2Q9BYE9 1310 aa16.77■□□□□ 0.28
SF1-210ENST00000443908 IGHDP01880 384 aa16.77■□□□□ 0.28
SF1-210ENST00000443908 PDE6BP35913 854 aa16.77■□□□□ 0.28
SF1-210ENST00000443908 TBC1D9BQ66K14 1250 aa16.77■□□□□ 0.28
SF1-210ENST00000443908 ZBTB38Q8NAP3 1195 aaPredicted RBP16.77■□□□□ 0.28
SF1-210ENST00000443908 C21orf2O43822 256 aa16.76■□□□□ 0.27
SF1-210ENST00000443908 ATP8B2P98198 1209 aa16.76■□□□□ 0.27
SF1-210ENST00000443908 UBE3BQ7Z3V4 1068 aa16.76■□□□□ 0.27
SF1-210ENST00000443908 SUCLG2Q96I99 432 aa16.76■□□□□ 0.27
SF1-210ENST00000443908 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
SF1-210ENST00000443908 GPTP24298 496 aa16.75■□□□□ 0.27
SF1-210ENST00000443908 RABL6Q3YEC7 729 aaPredicted RBP16.75■□□□□ 0.27
SF1-210ENST00000443908 SMC5Q8IY18 1101 aa16.75■□□□□ 0.27
SF1-210ENST00000443908 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
SF1-210ENST00000443908 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
SF1-210ENST00000443908 BRIP1Q9BX63 1249 aa16.75■□□□□ 0.27
SF1-210ENST00000443908 PLA2G12BQ9BX93 195 aa16.75■□□□□ 0.27
SF1-210ENST00000443908 NIP7Q9Y221 180 aaKnown RBP eCLIP16.75■□□□□ 0.27
SF1-210ENST00000443908 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
SF1-210ENST00000443908 BRCA1P38398 1863 aaKnown RBP16.74■□□□□ 0.27
SF1-210ENST00000443908 PRELPP51888 382 aa16.74■□□□□ 0.27
SF1-210ENST00000443908 PPP1R42Q7Z4L9 355 aa16.74■□□□□ 0.27
SF1-210ENST00000443908 SSH3Q8TE77 659 aa16.74■□□□□ 0.27
SF1-210ENST00000443908 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
SF1-210ENST00000443908 PDZRN3Q9UPQ7 1066 aa16.74■□□□□ 0.27
SF1-210ENST00000443908 LAMB2P55268 1798 aa16.74■□□□□ 0.27
SF1-210ENST00000443908 POLA2Q14181 598 aa16.73■□□□□ 0.27
SF1-210ENST00000443908 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
SF1-210ENST00000443908 UTP14AQ9BVJ6 771 aaKnown RBP16.73■□□□□ 0.27
SF1-210ENST00000443908 BICC1Q9H694 974 aaKnown RBP16.73■□□□□ 0.27
SF1-210ENST00000443908 SH3TC1Q8TE82 1336 aa16.72■□□□□ 0.27
SF1-210ENST00000443908 NFKBIEO00221 500 aa16.72■□□□□ 0.27
SF1-210ENST00000443908 NTSR2O95665 410 aa16.72■□□□□ 0.27
SF1-210ENST00000443908 HSP90B1P14625 803 aaKnown RBP16.72■□□□□ 0.27
SF1-210ENST00000443908 COL13A1Q5TAT6 717 aaPredicted RBP16.72■□□□□ 0.27
SF1-210ENST00000443908 SUSD4Q5VX71 490 aa16.72■□□□□ 0.27
SF1-210ENST00000443908 PRR5LQ6MZQ0 368 aa16.72■□□□□ 0.27
SF1-210ENST00000443908 JMYQ8N9B5 988 aa16.72■□□□□ 0.27
SF1-210ENST00000443908 DCTPP1Q9H773 170 aa16.72■□□□□ 0.27
SF1-210ENST00000443908 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
SF1-210ENST00000443908 PNMA6EA0A0J9YXQ4 647 aa16.71■□□□□ 0.27
SF1-210ENST00000443908 ST5P78524 1137 aa16.71■□□□□ 0.27
SF1-210ENST00000443908 FOXO4P98177 505 aa16.71■□□□□ 0.27
SF1-210ENST00000443908 CNBD1Q8NA66 436 aa16.71■□□□□ 0.27
SF1-210ENST00000443908 NYXQ9GZU5 481 aa16.71■□□□□ 0.27
SF1-210ENST00000443908 CARMIL3Q8ND23 1372 aa16.71■□□□□ 0.27
SF1-210ENST00000443908 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
SF1-210ENST00000443908 CAPN15O75808 1086 aa16.7■□□□□ 0.26
SF1-210ENST00000443908 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
SF1-210ENST00000443908 CNKSR1Q969H4 720 aa16.7■□□□□ 0.26
SF1-210ENST00000443908 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
SF1-210ENST00000443908 RIC1Q4ADV7 1423 aa16.7■□□□□ 0.26
SF1-210ENST00000443908 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
SF1-210ENST00000443908 PDE8AO60658 829 aa16.69■□□□□ 0.26
SF1-210ENST00000443908 SBF1O95248 1867 aa16.69■□□□□ 0.26
SF1-210ENST00000443908 CSF1RP07333 972 aa16.68■□□□□ 0.26
SF1-210ENST00000443908 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
SF1-210ENST00000443908 JARID2Q92833 1246 aaPredicted RBP16.68■□□□□ 0.26
SF1-210ENST00000443908 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
SF1-210ENST00000443908 NOP58Q9Y2X3 529 aaKnown RBP16.68■□□□□ 0.26
SF1-210ENST00000443908 DDX60Q8IY21 1712 aaKnown RBP16.67■□□□□ 0.26
SF1-210ENST00000443908 WDR90Q96KV7 1748 aa16.67■□□□□ 0.26
SF1-210ENST00000443908 POTECB2RU33 542 aa16.67■□□□□ 0.26
SF1-210ENST00000443908 CTSWP56202 376 aa16.67■□□□□ 0.26
SF1-210ENST00000443908 HSP90AB4PQ58FF6 505 aa16.67■□□□□ 0.26
SF1-210ENST00000443908 SLC10A5Q5PT55 438 aa16.67■□□□□ 0.26
SF1-210ENST00000443908 LMBR1LQ6UX01 489 aa16.67■□□□□ 0.26
SF1-210ENST00000443908 TNS4Q8IZW8 715 aa16.67■□□□□ 0.26
SF1-210ENST00000443908 MASTLQ96GX5 879 aa16.67■□□□□ 0.26
SF1-210ENST00000443908 MYH3P11055 1940 aa16.66■□□□□ 0.26
SF1-210ENST00000443908 RTL9Q8NET4 1388 aa16.66■□□□□ 0.26
SF1-210ENST00000443908 DDNO94850 711 aaPredicted RBP16.66■□□□□ 0.26
SF1-210ENST00000443908 NUCB1Q02818 461 aa16.66■□□□□ 0.26
SF1-210ENST00000443908 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
SF1-210ENST00000443908 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
SF1-210ENST00000443908 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
SF1-210ENST00000443908 COPRSQ9NQ92 184 aa16.66■□□□□ 0.26
SF1-210ENST00000443908 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
SF1-210ENST00000443908 RAB11FIP3O75154 756 aa16.65■□□□□ 0.26
SF1-210ENST00000443908 SRGNP10124 158 aa16.65■□□□□ 0.26
SF1-210ENST00000443908 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
SF1-210ENST00000443908 SOGA3Q5TF21 947 aa16.65■□□□□ 0.26
SF1-210ENST00000443908 PRPF40BQ6NWY9 871 aaKnown RBP16.65■□□□□ 0.26
SF1-210ENST00000443908 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
SF1-210ENST00000443908 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
SF1-210ENST00000443908 SYNE4Q8N205 404 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms