RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 LTBP3Q9NS15 1303 aa13.14□□□□□ -0.31
HLA-DQB1-206ENST00000443574 LMNB1P20700 586 aa13.14□□□□□ -0.31
HLA-DQB1-206ENST00000443574 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB1-206ENST00000443574 TMC4Q7Z404 712 aa13.14□□□□□ -0.31
HLA-DQB1-206ENST00000443574 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB1-206ENST00000443574 RTKN2Q8IZC4 609 aa13.14□□□□□ -0.31
HLA-DQB1-206ENST00000443574 RNF181Q9P0P0 153 aa13.14□□□□□ -0.31
HLA-DQB1-206ENST00000443574 ABCC4O15439 1325 aa13.13□□□□□ -0.31
HLA-DQB1-206ENST00000443574 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
HLA-DQB1-206ENST00000443574 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
HLA-DQB1-206ENST00000443574 PDE8AO60658 829 aa13.13□□□□□ -0.31
HLA-DQB1-206ENST00000443574 RASSF7Q02833 373 aa13.13□□□□□ -0.31
HLA-DQB1-206ENST00000443574 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-206ENST00000443574 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
HLA-DQB1-206ENST00000443574 NFKBIEO00221 500 aa13.12□□□□□ -0.31
HLA-DQB1-206ENST00000443574 IGKV5-2P06315 115 aa13.12□□□□□ -0.31
HLA-DQB1-206ENST00000443574 SF3B3Q15393 1217 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB1-206ENST00000443574 C9orf131Q5VYM1 1079 aa13.12□□□□□ -0.31
HLA-DQB1-206ENST00000443574 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
HLA-DQB1-206ENST00000443574 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB1-206ENST00000443574 SSH1Q8WYL5 1049 aa13.12□□□□□ -0.31
HLA-DQB1-206ENST00000443574 BBOX1O75936 387 aa13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 GRAPQ13588 217 aa13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 GCKRQ14397 625 aa13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 MRPL50Q8N5N7 158 aaKnown RBP13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 GRAPLQ8TC17 118 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB1-206ENST00000443574 F6X3S4 739 aa13.1□□□□□ -0.31
HLA-DQB1-206ENST00000443574 ALDH1L1O75891 902 aa13.1□□□□□ -0.31
HLA-DQB1-206ENST00000443574 CTSWP56202 376 aa13.1□□□□□ -0.31
HLA-DQB1-206ENST00000443574 C7orf43Q8WVR3 580 aa13.1□□□□□ -0.31
HLA-DQB1-206ENST00000443574 SRCIN1Q9C0H9 1055 aa13.1□□□□□ -0.31
HLA-DQB1-206ENST00000443574 GPBP1L1Q9HC44 474 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB1-206ENST00000443574 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
HLA-DQB1-206ENST00000443574 KDM2BQ8NHM5 1336 aa13.1□□□□□ -0.31
HLA-DQB1-206ENST00000443574 LTBP1Q14766 1721 aa13.09□□□□□ -0.31
HLA-DQB1-206ENST00000443574 SUPT20HQ8NEM7 779 aa13.09□□□□□ -0.31
HLA-DQB1-206ENST00000443574 SNED1Q8TER0 1413 aa13.09□□□□□ -0.31
HLA-DQB1-206ENST00000443574 CDC5LQ99459 802 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB1-206ENST00000443574 PSMD1Q99460 953 aa13.09□□□□□ -0.31
HLA-DQB1-206ENST00000443574 C9orf78Q9NZ63 289 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-206ENST00000443574 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
HLA-DQB1-206ENST00000443574 RTL9Q8NET4 1388 aa13.08□□□□□ -0.31
HLA-DQB1-206ENST00000443574 GRM8O00222 908 aa13.08□□□□□ -0.32
HLA-DQB1-206ENST00000443574 BEND3Q5T5X7 828 aa13.08□□□□□ -0.32
HLA-DQB1-206ENST00000443574 SP8Q8IXZ3 490 aa13.08□□□□□ -0.32
HLA-DQB1-206ENST00000443574 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-206ENST00000443574 SCN4AP35499 1836 aa13.07□□□□□ -0.32
HLA-DQB1-206ENST00000443574 H7C1W4 665 aa13.07□□□□□ -0.32
HLA-DQB1-206ENST00000443574 IARSP41252 1262 aaKnown RBP13.07□□□□□ -0.32
HLA-DQB1-206ENST00000443574 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB1-206ENST00000443574 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
HLA-DQB1-206ENST00000443574 JDP2Q8WYK2 163 aa13.07□□□□□ -0.32
HLA-DQB1-206ENST00000443574 WDR90Q96KV7 1748 aa13.07□□□□□ -0.32
HLA-DQB1-206ENST00000443574 DUOX1Q9NRD9 1551 aa13.07□□□□□ -0.32
HLA-DQB1-206ENST00000443574 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB1-206ENST00000443574 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB1-206ENST00000443574 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-206ENST00000443574 DPY19L2Q6NUT2 758 aa13.06□□□□□ -0.32
HLA-DQB1-206ENST00000443574 ANKRD18AQ8IVF6 992 aa13.06□□□□□ -0.32
HLA-DQB1-206ENST00000443574 JARID2Q92833 1246 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB1-206ENST00000443574 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
HLA-DQB1-206ENST00000443574 PLA2G12BQ9BX93 195 aa13.06□□□□□ -0.32
HLA-DQB1-206ENST00000443574 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 OLFM4Q6UX06 510 aa13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 MPNDQ8N594 471 aa13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 TTLL11Q8NHH1 800 aa13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 COL4A1P02462 1669 aa13.05□□□□□ -0.32
HLA-DQB1-206ENST00000443574 IGHMBP2P38935 993 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB1-206ENST00000443574 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
HLA-DQB1-206ENST00000443574 ARHGAP45Q92619 1136 aa13.04□□□□□ -0.32
HLA-DQB1-206ENST00000443574 CHMP3Q9Y3E7 222 aa13.04□□□□□ -0.32
HLA-DQB1-206ENST00000443574 PSME4Q14997 1843 aa13.04□□□□□ -0.32
HLA-DQB1-206ENST00000443574 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 CASP7P55210 303 aa13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 NIM1KQ8IY84 436 aa13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 EYA3Q99504 573 aa13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 GREM2Q9H772 168 aa13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 SEC31BQ9NQW1 1179 aa13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 NSFL1CQ9UNZ2 370 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
HLA-DQB1-206ENST00000443574 ANKRD18BA2A2Z9 1011 aa13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 GLTPD2A6NH11 291 aa13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ITGA6P23229 1130 aa13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 PRELPP51888 382 aa13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 IFIT5Q13325 482 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 FAM161AQ3B820 660 aa13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 TAF7LQ5H9L4 462 aa13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 C16orf71Q8IYS4 520 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 MPHOSPH8Q99549 860 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms