RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
TOM1-208ENST00000443206 JDP2Q8WYK2 163 aa16.76■□□□□ 0.27
TOM1-208ENST00000443206 PDE8AO60658 829 aa16.75■□□□□ 0.27
TOM1-208ENST00000443206 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
TOM1-208ENST00000443206 SNED1Q8TER0 1413 aa16.74■□□□□ 0.27
TOM1-208ENST00000443206 CWF19L2Q2TBE0 894 aaKnown RBP16.74■□□□□ 0.27
TOM1-208ENST00000443206 MPNDQ8N594 471 aa16.74■□□□□ 0.27
TOM1-208ENST00000443206 SUPT20HQ8NEM7 779 aa16.74■□□□□ 0.27
TOM1-208ENST00000443206 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
TOM1-208ENST00000443206 JARID2Q92833 1246 aaPredicted RBP16.74■□□□□ 0.27
TOM1-208ENST00000443206 NEURL1BA8MQ27 555 aa16.73■□□□□ 0.27
TOM1-208ENST00000443206 DDNO94850 711 aaPredicted RBP16.73■□□□□ 0.27
TOM1-208ENST00000443206 CCDC152Q4G0S7 254 aa16.73■□□□□ 0.27
TOM1-208ENST00000443206 DPP8Q6V1X1 898 aaPredicted RBP16.73■□□□□ 0.27
TOM1-208ENST00000443206 LARGE2Q8N3Y3 721 aa16.73■□□□□ 0.27
TOM1-208ENST00000443206 RBM46Q8TBY0 533 aaKnown RBP16.73■□□□□ 0.27
TOM1-208ENST00000443206 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
TOM1-208ENST00000443206 CDHR2Q9BYE9 1310 aa16.72■□□□□ 0.27
TOM1-208ENST00000443206 MYH3P11055 1940 aa16.72■□□□□ 0.27
TOM1-208ENST00000443206 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
TOM1-208ENST00000443206 SLFN5Q08AF3 891 aa16.72■□□□□ 0.27
TOM1-208ENST00000443206 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
TOM1-208ENST00000443206 WDR90Q96KV7 1748 aa16.72■□□□□ 0.27
TOM1-208ENST00000443206 FZD9O00144 591 aa16.71■□□□□ 0.27
TOM1-208ENST00000443206 SLC51AQ86UW1 340 aa16.71■□□□□ 0.27
TOM1-208ENST00000443206 MIER1Q8N108 512 aa16.71■□□□□ 0.27
TOM1-208ENST00000443206 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
TOM1-208ENST00000443206 H7C1W4 665 aa16.7■□□□□ 0.26
TOM1-208ENST00000443206 PPIP5K2O43314 1243 aa16.7■□□□□ 0.26
TOM1-208ENST00000443206 EIF6P56537 245 aaKnown RBP16.7■□□□□ 0.26
TOM1-208ENST00000443206 GCKRQ14397 625 aa16.7■□□□□ 0.26
TOM1-208ENST00000443206 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
TOM1-208ENST00000443206 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
TOM1-208ENST00000443206 RTFDC1Q9BY42 306 aaPredicted RBP16.7■□□□□ 0.26
TOM1-208ENST00000443206 IQCA1LA6NCM1 817 aa16.69■□□□□ 0.26
TOM1-208ENST00000443206 POTECB2RU33 542 aa16.69■□□□□ 0.26
TOM1-208ENST00000443206 HSPA6P17066 643 aa16.69■□□□□ 0.26
TOM1-208ENST00000443206 FSTL1Q12841 308 aa16.69■□□□□ 0.26
TOM1-208ENST00000443206 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
TOM1-208ENST00000443206 CCDC85AQ96PX6 553 aaPredicted RBP16.69■□□□□ 0.26
TOM1-208ENST00000443206 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
TOM1-208ENST00000443206 NSFL1CQ9UNZ2 370 aaKnown RBP16.69■□□□□ 0.26
TOM1-208ENST00000443206 ZNF541Q9H0D2 1346 aa16.69■□□□□ 0.26
TOM1-208ENST00000443206 SCN4AP35499 1836 aa16.68■□□□□ 0.26
TOM1-208ENST00000443206 F6X3S4 739 aa16.68■□□□□ 0.26
TOM1-208ENST00000443206 CTSWP56202 376 aa16.68■□□□□ 0.26
TOM1-208ENST00000443206 AOC3Q16853 763 aa16.68■□□□□ 0.26
TOM1-208ENST00000443206 GPC2Q8N158 579 aa16.68■□□□□ 0.26
TOM1-208ENST00000443206 SMC1BQ8NDV3 1235 aa16.68■□□□□ 0.26
TOM1-208ENST00000443206 L3MBTL3Q96JM7 780 aaPredicted RBP16.68■□□□□ 0.26
TOM1-208ENST00000443206 ANKRD18AQ8IVF6 992 aa16.67■□□□□ 0.26
TOM1-208ENST00000443206 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
TOM1-208ENST00000443206 LRRC37AA6NMS7 1700 aa16.67■□□□□ 0.26
TOM1-208ENST00000443206 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
TOM1-208ENST00000443206 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
TOM1-208ENST00000443206 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
TOM1-208ENST00000443206 SLC4A10Q6U841 1118 aa16.66■□□□□ 0.26
TOM1-208ENST00000443206 CDC5LQ99459 802 aaKnown RBP16.66■□□□□ 0.26
TOM1-208ENST00000443206 GJA3Q9Y6H8 435 aa16.66■□□□□ 0.26
TOM1-208ENST00000443206 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
TOM1-208ENST00000443206 TRMT2AQ8IZ69 625 aaKnown RBP16.65■□□□□ 0.26
TOM1-208ENST00000443206 MRPL50Q8N5N7 158 aaKnown RBP16.65■□□□□ 0.26
TOM1-208ENST00000443206 EYA3Q99504 573 aa16.65■□□□□ 0.26
TOM1-208ENST00000443206 PLA2G12BQ9BX93 195 aa16.65■□□□□ 0.26
TOM1-208ENST00000443206 ANKIB1Q9P2G1 1089 aa16.65■□□□□ 0.26
TOM1-208ENST00000443206 ZNRF3Q9ULT6 936 aa16.65■□□□□ 0.26
TOM1-208ENST00000443206 GPSM2P81274 684 aa16.64■□□□□ 0.25
TOM1-208ENST00000443206 SSH1Q8WYL5 1049 aa16.64■□□□□ 0.25
TOM1-208ENST00000443206 GREM2Q9H772 168 aa16.64■□□□□ 0.25
TOM1-208ENST00000443206 HACL1Q9UJ83 578 aa16.64■□□□□ 0.25
TOM1-208ENST00000443206 COL4A5P29400 1685 aa16.64■□□□□ 0.25
TOM1-208ENST00000443206 CEP350Q5VT06 3117 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 ALDH1L1O75891 902 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 CT47B1P0C2W7 299 aaPredicted RBP16.63■□□□□ 0.25
TOM1-208ENST00000443206 LMOD1P29536 600 aaPredicted RBP16.63■□□□□ 0.25
TOM1-208ENST00000443206 APLP1P51693 650 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 CASP7P55210 303 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 ALDH1L2Q3SY69 923 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 SRCIN1Q9C0H9 1055 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
TOM1-208ENST00000443206 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 C9orf78Q9NZ63 289 aaPredicted RBP16.63■□□□□ 0.25
TOM1-208ENST00000443206 POLLQ9UGP5 575 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 PTPRCP08575 1304 aa16.63■□□□□ 0.25
TOM1-208ENST00000443206 COL4A1P02462 1669 aa16.62■□□□□ 0.25
TOM1-208ENST00000443206 IGHMBP2P38935 993 aaKnown RBP16.62■□□□□ 0.25
TOM1-208ENST00000443206 TBC1D16Q8TBP0 767 aa16.62■□□□□ 0.25
TOM1-208ENST00000443206 ZC3H12CQ9C0D7 883 aaKnown RBP16.62■□□□□ 0.25
TOM1-208ENST00000443206 GGA1Q9UJY5 639 aa16.62■□□□□ 0.25
TOM1-208ENST00000443206 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
TOM1-208ENST00000443206 SPEF2Q9C093 1822 aa16.61■□□□□ 0.25
TOM1-208ENST00000443206 G3V3G9 751 aa16.61■□□□□ 0.25
TOM1-208ENST00000443206 GRM8O00222 908 aa16.61■□□□□ 0.25
TOM1-208ENST00000443206 RIMBP2O15034 1052 aa16.61■□□□□ 0.25
TOM1-208ENST00000443206 CSF1RP07333 972 aa16.61■□□□□ 0.25
TOM1-208ENST00000443206 EPHX2P34913 555 aa16.61■□□□□ 0.25
TOM1-208ENST00000443206 CXCL9Q07325 125 aa16.61■□□□□ 0.25
TOM1-208ENST00000443206 TNIP1Q15025 636 aa16.61■□□□□ 0.25
TOM1-208ENST00000443206 EAPPQ56P03 285 aaPredicted RBP16.61■□□□□ 0.25
TOM1-208ENST00000443206 DCAF8Q5TAQ9 597 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms