RNA–Protein interactions for RNA: ENST00000442500.6

LINC00454-203, long intergenic non-protein coding RNA 454, humanhuman

TSL 5

Gene LINC00454, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-203ENST00000442500 PLIN1O60240 522 aa16.39■□□□□ 0.21
LINC00454-203ENST00000442500 CSF1RP07333 972 aa16.39■□□□□ 0.21
LINC00454-203ENST00000442500 FOXO4P98177 505 aa16.39■□□□□ 0.21
LINC00454-203ENST00000442500 CCDC152Q4G0S7 254 aa16.39■□□□□ 0.21
LINC00454-203ENST00000442500 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
LINC00454-203ENST00000442500 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
LINC00454-203ENST00000442500 RBM17Q96I25 401 aaKnown RBP16.39■□□□□ 0.21
LINC00454-203ENST00000442500 KAZALD1Q96I82 304 aa16.39■□□□□ 0.21
LINC00454-203ENST00000442500 COL4A1P02462 1669 aa16.39■□□□□ 0.21
LINC00454-203ENST00000442500 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
LINC00454-203ENST00000442500 ALDH1B1P30837 517 aa16.38■□□□□ 0.21
LINC00454-203ENST00000442500 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
LINC00454-203ENST00000442500 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
LINC00454-203ENST00000442500 SUCLG2Q96I99 432 aa16.38■□□□□ 0.21
LINC00454-203ENST00000442500 MEIS3Q99687 375 aa16.38■□□□□ 0.21
LINC00454-203ENST00000442500 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
LINC00454-203ENST00000442500 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
LINC00454-203ENST00000442500 RABL6Q3YEC7 729 aaPredicted RBP16.37■□□□□ 0.21
LINC00454-203ENST00000442500 EPHA10Q5JZY3 1008 aa16.37■□□□□ 0.21
LINC00454-203ENST00000442500 DDX46Q7L014 1031 aaKnown RBP16.37■□□□□ 0.21
LINC00454-203ENST00000442500 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
LINC00454-203ENST00000442500 BCS1LQ9Y276 419 aa16.37■□□□□ 0.21
LINC00454-203ENST00000442500 FER1L6Q2WGJ9 1857 aa16.37■□□□□ 0.21
LINC00454-203ENST00000442500 GNAI3P08754 354 aa16.36■□□□□ 0.21
LINC00454-203ENST00000442500 UBTFL1P0CB47 393 aaPredicted RBP16.36■□□□□ 0.21
LINC00454-203ENST00000442500 GRAPQ13588 217 aa16.36■□□□□ 0.21
LINC00454-203ENST00000442500 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
LINC00454-203ENST00000442500 GRAPLQ8TC17 118 aaPredicted RBP16.36■□□□□ 0.21
LINC00454-203ENST00000442500 C7orf43Q8WVR3 580 aa16.36■□□□□ 0.21
LINC00454-203ENST00000442500 WWC3Q9ULE0 1092 aa16.36■□□□□ 0.21
LINC00454-203ENST00000442500 HDAC5Q9UQL6 1122 aa16.36■□□□□ 0.21
LINC00454-203ENST00000442500 SNED1Q8TER0 1413 aa16.36■□□□□ 0.21
LINC00454-203ENST00000442500 MVPQ14764 893 aaKnown RBP16.35■□□□□ 0.21
LINC00454-203ENST00000442500 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
LINC00454-203ENST00000442500 BICC1Q9H694 974 aaKnown RBP16.35■□□□□ 0.21
LINC00454-203ENST00000442500 GREM2Q9H772 168 aa16.35■□□□□ 0.21
LINC00454-203ENST00000442500 SPEF2Q9C093 1822 aa16.35■□□□□ 0.21
LINC00454-203ENST00000442500 ZBTB7BO15156 539 aaPredicted RBP16.34■□□□□ 0.21
LINC00454-203ENST00000442500 BBOX1O75936 387 aa16.34■□□□□ 0.21
LINC00454-203ENST00000442500 GPR162Q16538 588 aa16.34■□□□□ 0.21
LINC00454-203ENST00000442500 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
LINC00454-203ENST00000442500 C20orf194Q5TEA3 1177 aa16.34■□□□□ 0.21
LINC00454-203ENST00000442500 LMBR1LQ6UX01 489 aa16.34■□□□□ 0.21
LINC00454-203ENST00000442500 CELF1Q92879 486 aaKnown RBP16.34■□□□□ 0.21
LINC00454-203ENST00000442500 SEC31BQ9NQW1 1179 aa16.34■□□□□ 0.21
LINC00454-203ENST00000442500 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
LINC00454-203ENST00000442500 GRIN3BO60391 1043 aa16.33■□□□□ 0.2
LINC00454-203ENST00000442500 SOGA3Q5TF21 947 aa16.33■□□□□ 0.2
LINC00454-203ENST00000442500 TMC4Q7Z404 712 aa16.33■□□□□ 0.2
LINC00454-203ENST00000442500 CCDC85AQ96PX6 553 aaPredicted RBP16.33■□□□□ 0.2
LINC00454-203ENST00000442500 UTRNP46939 3433 aa16.33■□□□□ 0.2
LINC00454-203ENST00000442500 LTBP1Q14766 1721 aa16.33■□□□□ 0.2
LINC00454-203ENST00000442500 SBF1O95248 1867 aa16.32■□□□□ 0.2
LINC00454-203ENST00000442500 ITGA6P23229 1130 aa16.32■□□□□ 0.2
LINC00454-203ENST00000442500 RPS8P62241 208 aaKnown RBP16.32■□□□□ 0.2
LINC00454-203ENST00000442500 PELP1Q8IZL8 1130 aaKnown RBP16.32■□□□□ 0.2
LINC00454-203ENST00000442500 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
LINC00454-203ENST00000442500 DDX19BQ9UMR2 479 aa16.32■□□□□ 0.2
LINC00454-203ENST00000442500 COG6Q9Y2V7 657 aa16.32■□□□□ 0.2
LINC00454-203ENST00000442500 ATP6V0A2Q9Y487 856 aa16.32■□□□□ 0.2
LINC00454-203ENST00000442500 LRRFIP2Q9Y608 721 aaKnown RBP16.32■□□□□ 0.2
LINC00454-203ENST00000442500 CHD4Q14839 1912 aa16.31■□□□□ 0.2
LINC00454-203ENST00000442500 C21orf2O43822 256 aa16.31■□□□□ 0.2
LINC00454-203ENST00000442500 GNAI2P04899 355 aa16.31■□□□□ 0.2
LINC00454-203ENST00000442500 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
LINC00454-203ENST00000442500 CC2D2BQ6DHV5 1058 aa16.31■□□□□ 0.2
LINC00454-203ENST00000442500 A0A1B0GUL6 1792 aa16.31■□□□□ 0.2
LINC00454-203ENST00000442500 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
LINC00454-203ENST00000442500 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
LINC00454-203ENST00000442500 MTX1Q13505 466 aa16.3■□□□□ 0.2
LINC00454-203ENST00000442500 CCDC93Q567U6 631 aa16.3■□□□□ 0.2
LINC00454-203ENST00000442500 ANKRD18AQ8IVF6 992 aa16.3■□□□□ 0.2
LINC00454-203ENST00000442500 SP8Q8IXZ3 490 aa16.3■□□□□ 0.2
LINC00454-203ENST00000442500 LTBP3Q9NS15 1303 aa16.29■□□□□ 0.2
LINC00454-203ENST00000442500 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
LINC00454-203ENST00000442500 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
LINC00454-203ENST00000442500 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
LINC00454-203ENST00000442500 CHMP4BQ9H444 224 aaKnown RBP16.29■□□□□ 0.2
LINC00454-203ENST00000442500 BSDC1Q9NW68 430 aaPredicted RBP16.29■□□□□ 0.2
LINC00454-203ENST00000442500 CHMP3Q9Y3E7 222 aa16.29■□□□□ 0.2
LINC00454-203ENST00000442500 DUOX1Q9NRD9 1551 aa16.29■□□□□ 0.2
LINC00454-203ENST00000442500 CCDC88AQ3V6T2 1871 aa16.29■□□□□ 0.2
LINC00454-203ENST00000442500 NFKBIEO00221 500 aa16.28■□□□□ 0.2
LINC00454-203ENST00000442500 KCNA4P22459 653 aa16.28■□□□□ 0.2
LINC00454-203ENST00000442500 OLFM4Q6UX06 510 aa16.28■□□□□ 0.2
LINC00454-203ENST00000442500 ZBTB40Q9NUA8 1239 aa16.28■□□□□ 0.2
LINC00454-203ENST00000442500 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
LINC00454-203ENST00000442500 DICER1Q9UPY3 1922 aaKnown RBP16.27■□□□□ 0.2
LINC00454-203ENST00000442500 IGHMBP2P38935 993 aaKnown RBP16.27■□□□□ 0.2
LINC00454-203ENST00000442500 RFX5P48382 616 aaPredicted RBP16.27■□□□□ 0.2
LINC00454-203ENST00000442500 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
LINC00454-203ENST00000442500 SUPT16HQ9Y5B9 1047 aaKnown RBP16.27■□□□□ 0.2
LINC00454-203ENST00000442500 PSMD1Q99460 953 aa16.26■□□□□ 0.19
LINC00454-203ENST00000442500 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC00454-203ENST00000442500 ARHGAP27Q6ZUM4 889 aa16.25■□□□□ 0.19
LINC00454-203ENST00000442500 MPHOSPH8Q99549 860 aa16.25■□□□□ 0.19
LINC00454-203ENST00000442500 RTFDC1Q9BY42 306 aaPredicted RBP16.25■□□□□ 0.19
LINC00454-203ENST00000442500 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
LINC00454-203ENST00000442500 TAOK3Q9H2K8 898 aa16.25■□□□□ 0.19
LINC00454-203ENST00000442500 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms