RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.24■□□□□ 0.67
NLE1-202ENST00000442241 COL15A1P39059 1388 aa19.24■□□□□ 0.67
NLE1-202ENST00000442241 MBD3O95983 291 aa19.24■□□□□ 0.67
NLE1-202ENST00000442241 TIMM10P62072 90 aa19.24■□□□□ 0.67
NLE1-202ENST00000442241 VPS53Q5VIR6 699 aa19.24■□□□□ 0.67
NLE1-202ENST00000442241 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
NLE1-202ENST00000442241 AFDNP55196 1824 aaKnown RBP19.23■□□□□ 0.67
NLE1-202ENST00000442241 EPB41L2O43491 1005 aaKnown RBP19.23■□□□□ 0.67
NLE1-202ENST00000442241 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.23■□□□□ 0.67
NLE1-202ENST00000442241 LRRC2Q9BYS8 371 aa19.23■□□□□ 0.67
NLE1-202ENST00000442241 F13A1P00488 732 aa19.23■□□□□ 0.67
NLE1-202ENST00000442241 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.23■□□□□ 0.67
NLE1-202ENST00000442241 PPFIA3O75145 1194 aa19.22■□□□□ 0.67
NLE1-202ENST00000442241 ZCRB1Q8TBF4 217 aaKnown RBP19.22■□□□□ 0.67
NLE1-202ENST00000442241 COPRSQ9NQ92 184 aa19.22■□□□□ 0.67
NLE1-202ENST00000442241 HS1BP3Q53T59 392 aa19.22■□□□□ 0.67
NLE1-202ENST00000442241 PLBD2Q8NHP8 589 aa19.21■□□□□ 0.67
NLE1-202ENST00000442241 LRRC24Q50LG9 513 aa19.21■□□□□ 0.67
NLE1-202ENST00000442241 MTMR6Q9Y217 621 aa19.21■□□□□ 0.67
NLE1-202ENST00000442241 A0A0G2JLW4 131 aa19.2■□□□□ 0.66
NLE1-202ENST00000442241 CASP7P55210 303 aa19.2■□□□□ 0.66
NLE1-202ENST00000442241 BLOC1S2Q6QNY1 142 aa19.2■□□□□ 0.66
NLE1-202ENST00000442241 TAF5LO75529 589 aa19.2■□□□□ 0.66
NLE1-202ENST00000442241 MSNP26038 577 aaKnown RBP19.2■□□□□ 0.66
NLE1-202ENST00000442241 FOXO4P98177 505 aa19.2■□□□□ 0.66
NLE1-202ENST00000442241 FOSBP53539 338 aa19.19■□□□□ 0.66
NLE1-202ENST00000442241 PUS3Q9BZE2 481 aaKnown RBP19.19■□□□□ 0.66
NLE1-202ENST00000442241 TSPY26PQ9H489 355 aa19.19■□□□□ 0.66
NLE1-202ENST00000442241 GOLIM4O00461 696 aa19.19■□□□□ 0.66
NLE1-202ENST00000442241 CDC37L1Q7L3B6 337 aa19.19■□□□□ 0.66
NLE1-202ENST00000442241 HIP1O00291 1037 aa19.18■□□□□ 0.66
NLE1-202ENST00000442241 TOB2Q14106 344 aaPredicted RBP19.18■□□□□ 0.66
NLE1-202ENST00000442241 KCNB2Q92953 911 aa19.18■□□□□ 0.66
NLE1-202ENST00000442241 ARFGEF2Q9Y6D5 1785 aa19.18■□□□□ 0.66
NLE1-202ENST00000442241 MED23Q9ULK4 1368 aa19.18■□□□□ 0.66
NLE1-202ENST00000442241 ATP5JP18859 108 aa19.18■□□□□ 0.66
NLE1-202ENST00000442241 RABL6Q3YEC7 729 aaPredicted RBP19.18■□□□□ 0.66
NLE1-202ENST00000442241 PDLIM2Q96JY6 352 aa19.18■□□□□ 0.66
NLE1-202ENST00000442241 ZNF609O15014 1411 aa19.17■□□□□ 0.66
NLE1-202ENST00000442241 LARP1BQ659C4 914 aaKnown RBP19.17■□□□□ 0.66
NLE1-202ENST00000442241 TM6SF1Q9BZW5 370 aa19.17■□□□□ 0.66
NLE1-202ENST00000442241 ZNF500O60304 480 aaPredicted RBP19.17■□□□□ 0.66
NLE1-202ENST00000442241 RPS6KB1P23443 525 aa19.17■□□□□ 0.66
NLE1-202ENST00000442241 NOL7Q9UMY1 257 aaKnown RBP19.17■□□□□ 0.66
NLE1-202ENST00000442241 JAK2O60674 1132 aa19.16■□□□□ 0.66
NLE1-202ENST00000442241 GIMAP6Q6P9H5 292 aa19.16■□□□□ 0.66
NLE1-202ENST00000442241 ATG9AQ7Z3C6 839 aa19.16■□□□□ 0.66
NLE1-202ENST00000442241 KAT6BQ8WYB5 2073 aa19.16■□□□□ 0.66
NLE1-202ENST00000442241 WDR17Q8IZU2 1322 aa19.16■□□□□ 0.66
NLE1-202ENST00000442241 SYNE4Q8N205 404 aa19.16■□□□□ 0.66
NLE1-202ENST00000442241 SNRKQ9NRH2 765 aa19.16■□□□□ 0.66
NLE1-202ENST00000442241 CWC25Q9NXE8 425 aaPredicted RBP19.16■□□□□ 0.66
NLE1-202ENST00000442241 TFIP11Q9UBB9 837 aaKnown RBP19.16■□□□□ 0.66
NLE1-202ENST00000442241 EVA1CP58658 441 aa19.15■□□□□ 0.66
NLE1-202ENST00000442241 DDX11Q96FC9 970 aa19.15■□□□□ 0.66
NLE1-202ENST00000442241 RNF20Q5VTR2 975 aa19.15■□□□□ 0.66
NLE1-202ENST00000442241 ZSCAN31Q96LW9 406 aaPredicted RBP19.15■□□□□ 0.66
NLE1-202ENST00000442241 SH2B1Q9NRF2 756 aaPredicted RBP19.15■□□□□ 0.66
NLE1-202ENST00000442241 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.15■□□□□ 0.66
NLE1-202ENST00000442241 PCDH11XQ9BZA7 1347 aa19.14■□□□□ 0.66
NLE1-202ENST00000442241 PCDH11YQ9BZA8 1340 aa19.14■□□□□ 0.66
NLE1-202ENST00000442241 H7C1W4 665 aa19.14■□□□□ 0.65
NLE1-202ENST00000442241 HCLS1P14317 486 aaPredicted RBP19.14■□□□□ 0.65
NLE1-202ENST00000442241 PSMA5P28066 241 aa19.14■□□□□ 0.65
NLE1-202ENST00000442241 HSP90AB3PQ58FF7 597 aa19.14■□□□□ 0.65
NLE1-202ENST00000442241 CYP21A2P08686 494 aa19.14■□□□□ 0.65
NLE1-202ENST00000442241 HSP90B1P14625 803 aaKnown RBP19.14■□□□□ 0.65
NLE1-202ENST00000442241 CHST3Q7LGC8 479 aa19.14■□□□□ 0.65
NLE1-202ENST00000442241 SYAP1Q96A49 352 aaPredicted RBP19.14■□□□□ 0.65
NLE1-202ENST00000442241 MAP7D2Q96T17 732 aa19.14■□□□□ 0.65
NLE1-202ENST00000442241 MRC1P22897 1456 aa19.14■□□□□ 0.65
NLE1-202ENST00000442241 ZNF335Q9H4Z2 1342 aaPredicted RBP19.13■□□□□ 0.65
NLE1-202ENST00000442241 PLCB2Q00722 1185 aa19.13■□□□□ 0.65
NLE1-202ENST00000442241 GLI3P10071 1580 aa19.13■□□□□ 0.65
NLE1-202ENST00000442241 IL2RBP14784 551 aa19.13■□□□□ 0.65
NLE1-202ENST00000442241 Q6ZUG5 572 aa19.13■□□□□ 0.65
NLE1-202ENST00000442241 HAUS7Q99871 368 aa19.13■□□□□ 0.65
NLE1-202ENST00000442241 ASAP1Q9ULH1 1129 aa19.13■□□□□ 0.65
NLE1-202ENST00000442241 NAP1L2Q9ULW6 460 aaPredicted RBP19.13■□□□□ 0.65
NLE1-202ENST00000442241 STOX1Q6ZVD7 989 aa19.12■□□□□ 0.65
NLE1-202ENST00000442241 FAM89AQ96GI7 184 aa19.12■□□□□ 0.65
NLE1-202ENST00000442241 SLAIN2Q9P270 581 aa19.12■□□□□ 0.65
NLE1-202ENST00000442241 UBE2HP62256 183 aa19.12■□□□□ 0.65
NLE1-202ENST00000442241 PKD1L3Q7Z443 1732 aa19.12■□□□□ 0.65
NLE1-202ENST00000442241 CAMK4Q16566 473 aa19.11■□□□□ 0.65
NLE1-202ENST00000442241 MCMDC2Q4G0Z9 681 aa19.11■□□□□ 0.65
NLE1-202ENST00000442241 NEK1Q96PY6 1258 aa19.11■□□□□ 0.65
NLE1-202ENST00000442241 USP25Q9UHP3 1055 aa19.11■□□□□ 0.65
NLE1-202ENST00000442241 CPDO75976 1380 aa19.11■□□□□ 0.65
NLE1-202ENST00000442241 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.11■□□□□ 0.65
NLE1-202ENST00000442241 FKBP4Q02790 459 aaKnown RBP eCLIP19.11■□□□□ 0.65
NLE1-202ENST00000442241 CCDC183Q5T5S1 534 aa19.11■□□□□ 0.65
NLE1-202ENST00000442241 ZNF830Q96NB3 372 aaPredicted RBP19.11■□□□□ 0.65
NLE1-202ENST00000442241 PAG1Q9NWQ8 432 aa19.11■□□□□ 0.65
NLE1-202ENST00000442241 GPTP24298 496 aa19.1■□□□□ 0.65
NLE1-202ENST00000442241 ADORA1P30542 326 aa19.1■□□□□ 0.65
NLE1-202ENST00000442241 FGD1P98174 961 aa19.1■□□□□ 0.65
NLE1-202ENST00000442241 RBM10P98175 930 aaKnown RBP19.1■□□□□ 0.65
NLE1-202ENST00000442241 TTC6Q86TZ1 520 aa19.1■□□□□ 0.65
NLE1-202ENST00000442241 TMEM87AQ8NBN3 555 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms