RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 SMC3Q9UQE7 1217 aa4.83□□□□□ -1.64
R3HDM1-209ENST00000441871 THRAP3Q9Y2W1 955 aaKnown RBP4.83□□□□□ -1.64
R3HDM1-209ENST00000441871 CHMP3Q9Y3E7 222 aa4.83□□□□□ -1.64
R3HDM1-209ENST00000441871 SOCS7O14512 581 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 TNFRSF10BO14763 440 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 RNASEH2AO75792 299 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 KRT18P05783 430 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 RBP3P10745 1247 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 SIM2Q14190 667 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 ELOAQ14241 798 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 PPP2R5AQ15172 486 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 WASHC4Q2M389 1173 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 C10orf62Q5T681 223 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 PPP2R2DQ66LE6 453 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 LMNTD2Q8IXW0 634 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 CHCHD4Q8N4Q1 142 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 OGFOD1Q8N543 542 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 TEX19Q8NA77 164 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 ZNF511Q8NB15 262 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 TTC14Q96N46 770 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 UCN2Q96RP3 112 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 TMEM51Q9NW97 253 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 POLG2Q9UHN1 485 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 ACAD8Q9UKU7 415 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 ASAP1Q9ULH1 1129 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 ZMIZ1Q9ULJ6 1067 aa4.82□□□□□ -1.64
R3HDM1-209ENST00000441871 PABPN1LA6NDY0 278 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 A6NJY4 79 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 VARSP26640 1264 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 NOS2P35228 1153 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 CASP2P42575 452 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 CLK1P49759 484 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 SH3BP2P78314 561 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 SKOR1P84550 965 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 ARID5AQ03989 594 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 TMEM95Q3KNT9 176 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 EAPPQ56P03 285 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 PLEKHG4Q58EX7 1191 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 NBPF14Q5TI25 921 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 ANKRD13BQ86YJ7 626 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 SUGP1Q8IWZ8 645 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 RAVER1Q8IY67 606 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 PNMA1Q8ND90 353 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 FAM174AQ8TBP5 190 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 STK32AQ8WU08 396 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 GOLGA1Q92805 767 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 RNF34Q969K3 372 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 ERP27Q96DN0 273 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 CFAP53Q96M91 514 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 PAIP2Q9BPZ3 127 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 ALG2Q9H553 416 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 YY1AP1Q9H869 796 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 ARNT2Q9HBZ2 717 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 INTUQ9ULD6 942 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 SLC45A1Q9Y2W3 748 aa4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 MAFBQ9Y5Q3 323 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 CFAP65Q6ZU64 1925 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-209ENST00000441871 J3QL48 77 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 IPO8O15397 1037 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 ST8SIA5O15466 376 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 MYL1P05976 194 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 CDC27P30260 824 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 CASQ1P31415 396 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 WASHC5Q12768 1159 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 COL19A1Q14993 1142 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 INO80DQ53TQ3 878 aaPredicted RBP4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 UBE2Q1Q7Z7E8 422 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 BPHLQ86WA6 291 aaPredicted RBP4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 RELL1Q8IUW5 271 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 ASB16Q96NS5 453 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 PPCSQ9HAB8 311 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 AAASQ9NRG9 546 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 RBM28Q9NW13 759 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 MAP10Q9P2G4 905 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 HDAC9Q9UKV0 1011 aa4.8□□□□□ -1.64
R3HDM1-209ENST00000441871 GOLGA6L6A8MZA4 724 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 K7ELQ4 463 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 PES1O00541 588 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 AP1G2O75843 785 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 AVPP01185 164 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 MYL3P08590 195 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 KCNA2P16389 499 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 SMPD1P17405 629 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 NAT1P18440 290 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 MAPK1P28482 360 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 HMGN5P82970 282 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 SATB1Q01826 763 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 CBLBQ13191 982 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 ARID5BQ14865 1188 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 CCDC70Q6NSX1 233 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 PDXDC1Q6P996 788 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 HDGFL2Q7Z4V5 671 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 USP48Q86UV5 1035 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 SKAP1Q86WV1 359 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 NDUFAF2Q8N183 169 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 KIAA1958Q8N8K9 716 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 MYRIPQ8NFW9 859 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 FRS2Q8WU20 508 aa4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 RNPC3Q96LT9 517 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-209ENST00000441871 FMNL2Q96PY5 1086 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms