RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 IER5Q5VY09 327 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 NBPF11Q86T75 865 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 GAS2L2Q8NHY3 880 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 NGLY1Q96IV0 654 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 RGS9O75916 674 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P9-201ENST00000441799 CHMP7Q8WUX9 453 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P9-201ENST00000441799 USP21Q9UK80 565 aa6.71□□□□□ -1.34
HMGB3P9-201ENST00000441799 TGFBR3LH3BV60 316 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 LGR5O75473 907 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 MSL1Q68DK7 614 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 TICAM2Q86XR7 235 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 WFDC12Q8WWY7 111 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 LPIN3Q9BQK8 851 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 ZFATQ9P243 1243 aa6.7□□□□□ -1.34
HMGB3P9-201ENST00000441799 RAD21O60216 631 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 RASA1P20936 1047 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 INPP5BP32019 993 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 SEC13P55735 322 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 HIF1AQ16665 826 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 RTN1Q16799 776 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 FAM35AQ86V20 835 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 FBXO11Q86XK2 927 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 NAP1L5Q96NT1 182 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 POLR3GLQ9BT43 218 aa6.69□□□□□ -1.34
HMGB3P9-201ENST00000441799 CCDC180Q9P1Z9 1646 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 MAP3K6O95382 1288 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 CPB1P15086 417 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 NOS3P29474 1203 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 IREB2P48200 963 aaKnown RBP6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 PERM1Q5SV97 790 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 PNMA5Q96PV4 448 aa6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 TFIP11Q9UBB9 837 aaKnown RBP6.68□□□□□ -1.34
HMGB3P9-201ENST00000441799 TARSP26639 723 aaKnown RBP6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 DTWD1Q8N5C7 304 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 TRPM4Q8TD43 1214 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 IFT43Q96FT9 208 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 KLK14Q9P0G3 267 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 FRRS1LQ9P0K9 344 aa6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 RBM19Q9Y4C8 960 aaKnown RBP6.67□□□□□ -1.34
HMGB3P9-201ENST00000441799 DEAF1O75398 565 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 CLSTN1O94985 981 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 TTC9Q92623 222 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 CCDC136Q96JN2 1154 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 MEGF10Q96KG7 1140 aa6.66□□□□□ -1.34
HMGB3P9-201ENST00000441799 ZBTB7CA1YPR0 619 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 IDH3AP50213 366 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 MLLT1Q03111 559 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 CRTC2Q53ET0 693 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 DHX32Q7L7V1 743 aaKnown RBP6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 KRT25Q7Z3Z0 450 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 HINFPQ9BQA5 517 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 RNF112Q9ULX5 631 aa6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 MAFBQ9Y5Q3 323 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P9-201ENST00000441799 DLL1O00548 723 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 SASH3O75995 380 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 IGFBP4P22692 258 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 PTK7Q13308 1070 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 PCSK7Q16549 785 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 KANK4Q5T7N3 995 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 IGF2-ASQ6U949 168 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 WFDC8Q8IUA0 241 aa6.64□□□□□ -1.35
HMGB3P9-201ENST00000441799 OPLAHO14841 1288 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 GPLD1P80108 840 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 DPYDQ12882 1025 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 FLIIQ13045 1269 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 ELMSAN1Q6PJG2 1045 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 RB1CC1Q8TDY2 1594 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 KRTAP9-9Q9BYP9 154 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 KRTAP9-4Q9BYQ2 154 aa6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 QTRT2Q9H974 415 aaKnown RBP6.63□□□□□ -1.35
HMGB3P9-201ENST00000441799 MICAL2O94851 1124 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 DGKZQ13574 1117 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 GLIPR1L2Q4G1C9 344 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 LARP1Q6PKG0 1096 aaKnown RBP6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 PRR23CQ6ZRP0 262 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 HFE2Q6ZVN8 426 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 DZIP1LQ8IYY4 767 aaKnown RBP6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 FNBP4Q8N3X1 1017 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 SMG9Q9H0W8 520 aaKnown RBP6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 C11orf16Q9NQ32 467 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 USP20Q9Y2K6 914 aa6.62□□□□□ -1.35
HMGB3P9-201ENST00000441799 ALX3O95076 343 aa6.61□□□□□ -1.35
HMGB3P9-201ENST00000441799 RARAP10276 462 aa6.61□□□□□ -1.35
HMGB3P9-201ENST00000441799 EPB42P16452 691 aa6.61□□□□□ -1.35
HMGB3P9-201ENST00000441799 GLMNQ92990 594 aa6.61□□□□□ -1.35
HMGB3P9-201ENST00000441799 WEE1P30291 646 aa6.6□□□□□ -1.35
HMGB3P9-201ENST00000441799 ARSDP51689 593 aa6.6□□□□□ -1.35
HMGB3P9-201ENST00000441799 ANKMY2Q8IV38 441 aa6.6□□□□□ -1.35
HMGB3P9-201ENST00000441799 TLR7Q9NYK1 1049 aaKnown RBP6.6□□□□□ -1.35
HMGB3P9-201ENST00000441799 J3QW42 95 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 NRLP54845 237 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 C11orf91Q3C1V1 193 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 TMEM130Q8N3G9 435 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 CLUAP1Q96AJ1 413 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 AKTIPQ9H8T0 292 aa6.59□□□□□ -1.35
HMGB3P9-201ENST00000441799 LRFN2Q9ULH4 789 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms